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Depends On Me ACME, affy, affycomp, affyContam, affycoretools, affyPLM, AGDEX, AIMS, altcdfenvs, annaffy, AnnotationDbi, AnnotationForge, ArrayExpress, arrayMvout, BAGS, bandle, beadarray, BicARE, bigmelon, BioMVCClass, BioQC, BLMA, borealis, CAMERA, cancerclass, casper, Category, categoryCompare, CCPROMISE, CGHbase, CGHcall, CGHregions, clippda, clusterStab, CMA, cn.farms, codelink, convert, copa, covEB, covRNA, DEXSeq, DFP, diggit, doppelgangR, DSS, dyebias, EBarrays, EDASeq, edge, EGSEA, epigenomix, epivizrData, ExiMiR, ExpressionAtlas, fabia, factDesign, fastseg, flowBeads, frma, gaga, GeneMeta, geneplotter, geneRecommender, GeneRegionScan, GeneSelectMMD, geNetClassifier, GeoDiff, GEOexplorer, GeomxTools, GEOquery, GOexpress, goProfiles, GOstats, GSEABase, GSEABenchmarkeR, GSEAlm, GWASTools, hapFabia, HELP, hopach, HybridMTest, iCheck, IdeoViz, idiogram, INSPEcT, isobar, iterativeBMA, IVAS, lumi, made4, massiR, MEAL, metagenomeSeq, MethPed, methylumi, Mfuzz, MiChip, microbiomeExplorer, mimager, MineICA, MiRaGE, miRcomp, MLInterfaces, MMDiff2, monocle, MSnbase, Mulcom, MultiDataSet, multtest, NanoStringDiff, NanoStringNCTools, NanoTube, NOISeq, normalize450K, NormqPCR, octad, oligo, omicRexposome, OrderedList, OTUbase, pandaR, panp, pcaMethods, pdInfoBuilder, pepStat, phenoTest, PLPE, POWSC, PREDA, pRolocGUI, PROMISE, qpcrNorm, qPLEXanalyzer, R453Plus1Toolbox, RbcBook1, rbsurv, rcellminer, ReadqPCR, rexposome, Rmagpie, Rnits, RTopper, RUVSeq, safe, SCAN.UPC, SeqGSEA, SigCheck, siggenes, singleCellTK, SpeCond, SPEM, spkTools, splineTimeR, SummarizedExperiment, tigre, tilingArray, topGO, TPP, tRanslatome, twilight, UNDO, VegaMC, viper, vsn, wateRmelon, webbioc, XDE, yarn, EuPathDB, affycompData, ALL, bcellViper, beadarrayExampleData, bladderbatch, brgedata, cancerdata, CCl4, CLL, colonCA, CRCL18, curatedBreastData, curatedOvarianData, davidTiling, diggitdata, DLBCL, dressCheck, etec16s, fabiaData, fibroEset, gaschYHS, golubEsets, GSE103322, GSE13015, GSE62944, GSVAdata, harbChIP, Hiiragi2013, HumanAffyData, humanStemCell, Iyer517, kidpack, leeBamViews, leukemiasEset, lumiBarnes, lungExpression, MAQCsubset, MetaGxBreast, MetaGxOvarian, miRNATarget, msd16s, mvoutData, Neve2006, PREDAsampledata, ProData, prostateCancerCamcap, prostateCancerGrasso, prostateCancerStockholm, prostateCancerTaylor, prostateCancerVarambally, pumadata, rcellminerData, RUVnormalizeData, SpikeInSubset, TCGAcrcmiRNA, TCGAcrcmRNA, tweeDEseqCountData, yeastCC, maEndToEnd, countTransformers, crmn, dGAselID, eLNNpairedCov, GWASbyCluster, heatmapFlex, InteRD, lmQCM, MM2Sdata, MMDvariance, propOverlap, statVisual

Imports Me a4Base, a4Classif, a4Core, a4Preproc, ABarray, ACE, aCGH, adSplit, affyILM, AgiMicroRna, ANF, annmap, annotate, AnnotationHubData, annotationTools, arrayQualityMetrics, attract, ballgown, BASiCS, BayesKnockdown, BgeeDB, biobroom, bioCancer, biocViews, BioNet, biosigner, biscuiteer, BiSeq, blima, bnem, BSgenomeForge, bsseq, BubbleTree, CAFE, canceR, Cardinal, CellScore, CellTrails, cfdnakit, CGHnormaliter, ChIPQC, ChIPXpress, ChromHeatMap, cicero, clipper, CluMSID, cn.mops, COCOA, cogena, combi, CompoundDb, ConsensusClusterPlus, consensusDE, coRdon, CoreGx, crlmm, cummeRbund, cyanoFilter, cycle, cydar, CytoML, DAPAR, ddCt, debCAM, DEGreport, DESeq2, destiny, DExMA, discordant, easyRNASeq, EBarrays, ecolitk, EGAD, ensembldb, EpiMix, erma, esetVis, ExiMiR, ffpe, findIPs, flowClust, flowCore, flowFP, flowMatch, flowMeans, flowSpecs, flowStats, flowViz, flowWorkspace, FRASER, frma, frmaTools, gCrisprTools, gcrma, gemma.R, geneClassifiers, GeneExpressionSignature, genefilter, GeneMeta, geneRecommender, GeneRegionScan, GENESIS, GenomicInteractions, GenomicScores, GenomicSuperSignature, GEOsubmission, gep2pep, ggbio, girafe, GlobalAncova, globaltest, gmapR, GSRI, GSVA, Gviz, Harshlight, HEM, hermes, HTSFilter, infinityFlow, IsoformSwitchAnalyzeR, isomiRs, katdetectr, kissDE, lapmix, LiquidAssociation, LRBaseDbi, lute, MAGeCKFlute, makecdfenv, MAPFX, maSigPro, MAST, mastR, mBPCR, MeSHDbi, metaseqR2, MethylAid, methylCC, methylclock, methylumi, mfa, MiChip, microbiomeDASim, microbiomeMarker, minfi, MinimumDistance, MiPP, MIRA, miRSM, missMethyl, MLSeq, mogsa, Moonlight2R, MoonlightR, MSnID, MultiAssayExperiment, MultiRNAflow, multiscan, mzR, netZooR, npGSEA, nucleR, oligoClasses, omicade4, omicsViewer, ontoProc, oposSOM, oppar, OrganismDbi, panp, phantasus, phantasusLite, PharmacoGx, phenomis, phyloseq, piano, plgem, plier, PLSDAbatch, podkat, prebs, PrInCE, progeny, pRoloc, PROMISE, PRONE, PROPS, Prostar, protGear, ptairMS, puma, PureCN, pvac, pvca, qcmetrics, QDNAseq, QFeatures, qpgraph, quantiseqr, quantro, QuasR, qusage, RadioGx, randPack, ReactomeGSA, RIVER, Rmagpie, RMassBank, RNAseqCovarImpute, roastgsa, rols, ropls, ROTS, rqubic, rScudo, Rtpca, Rtreemix, RUVnormalize, scmap, scTGIF, SeqVarTools, shinyMethyl, ShortRead, SigsPack, sigsquared, singscore, sitadela, sketchR, SomaticSignatures, SpatialDecon, SpatialFeatureExperiment, SpatialOmicsOverlay, spkTools, SPONGE, standR, STATegRa, subSeq, synapter, TDbasedUFEadv, TEQC, TFBSTools, tidyFlowCore, timecourse, TMixClust, TnT, topdownr, ToxicoGx, tradeSeq, TTMap, twilight, txdbmaker, uSORT, VanillaICE, variancePartition, VariantAnnotation, VariantFiltering, VariantTools, vidger, vulcan, wateRmelon, wpm, xcms, Xeva, BloodCancerMultiOmics2017, DeSousa2013, DExMAdata, Fletcher2013a, GSE13015, hgu133plus2CellScore, IHWpaper, KEGGandMetacoreDzPathwaysGEO, KEGGdzPathwaysGEO, mcsurvdata, pRolocdata, RNAinteractMAPK, seqc, signatureSearchData, ExpHunterSuite, ExpressionNormalizationWorkflow, GeoMxWorkflows, AnnoProbe, bapred, BisqueRNA, CIARA, ClassComparison, ClassDiscovery, D4TAlink.light, FMradio, geneExpressionFromGEO, GSEMA, IntegratedJM, maGUI, nlcv, NMF, PCAPAM50, RCPA, RobLox, RobLoxBioC, RPPanalyzer, SCdeconR, seAMLess, ssizeRNA, TailRank

Suggests Me AUCell, autonomics, BiocGenerics, CellMapper, clustComp, coseq, cypress, dar, DART, dcanr, dearseq, edgeR, EnMCB, EpiDISH, epivizr, epivizrChart, epivizrStandalone, GENIE3, GenomicPlot, GenomicRanges, GSAR, GSgalgoR, Heatplus, interactiveDisplay, kebabs, les, limma, M3Drop, mCSEA, messina, MOSim, msa, multiClust, OSAT, PCAtools, RcisTarget, ribosomeProfilingQC, ROC, RTCGA, scater, scmeth, SeqArray, sparrow, spatialHeatmap, stageR, survcomp, TargetScore, TCGAbiolinks, TFutils, tidytof, tkWidgets, TOP, vbmp, widgetTools, biotmleData, breastCancerMAINZ, breastCancerNKI, breastCancerTRANSBIG, breastCancerUNT, breastCancerUPP, breastCancerVDX, dorothea, dyebiasexamples, HMP16SData, HMP2Data, homosapienDEE2CellScore, mammaPrintData, RegParallel, rheumaticConditionWOLLBOLD, seventyGeneData, yeastExpData, yeastRNASeq, amap, aroma.affymetrix, BaseSet, clValid, CrossValidate, distrDoc, GenAlgo, hexbin, HTSCluster, isatabr, MetabolSSMF, mi4p, Modeler, multiclassPairs, NACHO, ordinalbayes, Patterns, rsconnect, Seurat, sigminer, SomaDataIO, tinyarray

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