infinityFlow

This package is for version 3.20 of Bioconductor; for the stable, up-to-date release version, see infinityFlow.

Augmenting Massively Parallel Cytometry Experiments Using Multivariate Non-Linear Regressions

Bioconductor version: 3.20

Pipeline to analyze and merge data files produced by BioLegend's LEGENDScreen or BD Human Cell Surface Marker Screening Panel (BD Lyoplates).

Author: Etienne Becht [cre, aut]

Maintainer: Etienne Becht <etienne.becht at protonmail.com>

Citation (from within R, enter citation("infinityFlow")):

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("infinityFlow")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("infinityFlow")

Basic usage of the infinityFlow package HTML R Script

Training non default regression models HTML R Script

Reference Manual PDF

Version 1.16.0

In Bioconductor since BioC 3.12 (R-4.0) (4.5 years)

License GPL-3

Depends R (>= 4.0.0), flowCore

Imports stats, grDevices, utils, graphics, pbapply, matlab, png, raster, grid, uwot, gtools, Biobase, generics, parallel, methods, xgboost

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Follow Installation instructions to use this package in your R session.

Windows Binary (x86_64) infinityFlow_1.16.0.zip

macOS Binary (x86_64) infinityFlow_1.16.0.tgz

macOS Binary (arm64) infinityFlow_1.16.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/infinityFlow

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/infinityFlow

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