pRolocGUI

This package is for version 3.20 of Bioconductor; for the stable, up-to-date release version, see pRolocGUI.

Interactive visualisation of spatial proteomics data

Bioconductor version: 3.20

The package pRolocGUI comprises functions to interactively visualise spatial proteomics data on the basis of pRoloc, pRolocdata and shiny.

Author: Lisa Breckels [aut, cre] ORCID iD ORCID: 0000-0001-8918-7171 , Thomas Naake [aut], Laurent Gatto [aut] ORCID iD ORCID: 0000-0002-1520-2268

Maintainer: Lisa Breckels <lms79 at cam.ac.uk>

Citation (from within R, enter citation("pRolocGUI")):

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("pRolocGUI")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("pRolocGUI")

pRolocGUI - Interactive visualisation of spatial proteomics data HTML R Script

Reference Manual PDF

pRoloc, pRolocdata and pRolocGUI Video

Version 2.16.0

In Bioconductor since BioC 3.0 (R-3.1) (10.5 years)

License GPL-2

Depends methods, R (>= 3.1.0), pRoloc(>= 1.27.6), Biobase, MSnbase(>= 2.1.11)

System Requirements

Suggests pRolocdata, knitr, BiocStyle(>= 2.5.19), rmarkdown, testthat (>= 3.0.0)

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Follow Installation instructions to use this package in your R session.

Windows Binary (x86_64) pRolocGUI_2.16.0.zip

macOS Binary (x86_64) pRolocGUI_2.16.0.tgz

macOS Binary (arm64) pRolocGUI_2.16.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/pRolocGUI

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/pRolocGUI

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