Prostar

This package is for version 3.20 of Bioconductor; for the stable, up-to-date release version, see Prostar.

Provides a GUI for DAPAR

Bioconductor version: 3.20

This package provides a GUI interface for the DAPAR package. The package Prostar (Proteomics statistical analysis with R) is a Bioconductor distributed R package which provides all the necessary functions to analyze quantitative data from label-free proteomics experiments. Contrarily to most other similar R packages, it is endowed with rich and user-friendly graphical interfaces, so that no programming skill is required.

Author: Thomas Burger [aut], Florence Combes [aut], Samuel Wieczorek [cre, aut]

Maintainer: Samuel Wieczorek <samuel.wieczorek at cea.fr>

Citation (from within R, enter citation("Prostar")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("Prostar")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Prostar")

Prostar User Manual HTML R Script

Reference Manual PDF

README Text

NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews GUI, MassSpectrometry, Normalization, Preprocessing, Proteomics, Software

Version 1.38.1

In Bioconductor since BioC 3.2 (R-3.2) (9.5 years)

License Artistic-2.0

Depends R (>= 4.4.0)

Imports DAPAR(>= 1.35.1), DAPARdata(>= 1.30.0), rhandsontable, data.table, shiny, shinyBS, shinyAce, highcharter, htmlwidgets, webshot, shinythemes, later, shinycssloaders, future, promises, shinyjqui, tibble, ggplot2, gplots, shinyjs, vioplot, Biobase, DT, R.utils, RColorBrewer, XML, colourpicker, gtools, markdown, rclipboard, sass, shinyTree, shinyWidgets

System Requirements

URL http://www.prostar-proteomics.org/

Bug Reports https://github.com/edyp-lab/Prostar/issues

Suggests BiocStyle, BiocManager, testthat, knitr

Linking To

Enhances

Depends On Me

Imports Me

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Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Prostar_1.38.1.tar.gz

Windows Binary (x86_64) Prostar_1.38.1.zip

macOS Binary (x86_64) Prostar_1.38.1.tgz

macOS Binary (arm64) Prostar_1.38.1.tgz

Source Repository git clone https://git.bioconductor.org/packages/Prostar

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Prostar

Bioc Package Browser https://code.bioconductor.org/browse/Prostar/

Package Short Url https://bioconductor.org/packages/Prostar/

Package Downloads Report Download Stats

Old Source Packages for BioC 3.20 Source Archive