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qPLEXanalyzer
This package is for version 3.20 of Bioconductor; for the stable, up-to-date release version, see qPLEXanalyzer.
Tools for quantitative proteomics data analysis
Bioconductor version: 3.20
Tools for TMT based quantitative proteomics data analysis.
Author: Matthew Eldridge [aut], Kamal Kishore [aut], Ashley Sawle [aut, cre]
Maintainer: Ashley Sawle <ads2202cu at gmail.com>
Citation (from within R, enter
citation("qPLEXanalyzer")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("qPLEXanalyzer")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("qPLEXanalyzer") Reference Manual
PDF
NEWS
Text
Details
biocViews
DataImport, ImmunoOncology, MassSpectrometry, Normalization, Preprocessing, Proteomics, QualityControl, Software
Version
1.24.0
In Bioconductor since
BioC 3.8 (R-3.5) (6.5 years)
License
GPL-2
Imports
assertthat, BiocGenerics, Biostrings, dplyr (>= 1.0.0), ggdendro, ggplot2, graphics, grDevices, IRanges, limma, magrittr, preprocessCore, purrr, RColorBrewer, readr, rlang, scales, stats, stringr, tibble, tidyr, tidyselect, utils
System Requirements
See More
Linking To
Enhances
Depends On Me
qPLEXdata
Imports Me
Suggests Me
Links To Me
Build Report
Build Report
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package
qPLEXanalyzer_1.24.0.tar.gz
Windows Binary (x86_64)
qPLEXanalyzer_1.24.0.zip
macOS Binary (x86_64)
qPLEXanalyzer_1.24.0.tgz
macOS Binary (arm64)
qPLEXanalyzer_1.24.0.tgz
Source Repository
git clone https://git.bioconductor.org/packages/qPLEXanalyzer
Source Repository (Developer Access)
git clone git@git.bioconductor.org:packages/qPLEXanalyzer
Bioc Package Browser
https://code.bioconductor.org/browse/qPLEXanalyzer/
Package Short Url
https://bioconductor.org/packages/qPLEXanalyzer/
Package Downloads Report
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