HELP

This package is for version 3.20 of Bioconductor; for the stable, up-to-date release version, see HELP.

Tools for HELP data analysis

Bioconductor version: 3.20

The package contains a modular pipeline for analysis of HELP microarray data, and includes graphical and mathematical tools with more general applications.

Author: Reid F. Thompson <reid.thompson at gmail.com>, John M. Greally <john.greally at einstein.yu.edu>, with contributions from Mark Reimers <mreimers at vcu.edu>

Maintainer: Reid F. Thompson <reid.thompson at gmail.com>

Citation (from within R, enter citation("HELP")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("HELP")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HELP")

1. Primer PDF R Script

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews CpGIsland, DNAMethylation, DataImport, Microarray, Preprocessing, QualityControl, Software, TwoChannel, Visualization

Version 1.64.0

In Bioconductor since BioC 2.3 (R-2.8) (16.5 years)

License GPL (>= 2)

Depends R (>= 2.8.0), stats, graphics, grDevices, Biobase, methods

Imports

System Requirements

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Depends On Me

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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HELP_1.64.0.tar.gz

Windows Binary (x86_64) HELP_1.64.0.zip (64-bit only)

macOS Binary (x86_64) HELP_1.64.0.tgz

macOS Binary (arm64) HELP_1.64.0.tgz

Source Repository git clone https://git.bioconductor.org/packages/HELP

Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/HELP

Bioc Package Browser https://code.bioconductor.org/browse/HELP/

Package Short Url https://bioconductor.org/packages/HELP/

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