| Accession: | |
|---|---|
| Functional site class: | Ciliary targeting motifs |
| Functional site description: | Ciliary transport is a specialised form of vesicular transport from the trans-Golgi network to the plasma membrane. It is responsible for the delivery of specialised membrane proteins like photoreceptors and ion channels to the cilia of vertebrate cells. Dysfunction in the delivery of ciliary cargo causes several human disorders (ciliopathies), such as retinal degeneration and polycystic kidneys. |
| ELMs with same func. site: | TRG_Cilium_Arf4_1 TRG_Cilium_RVxP_2 |
| ELM Description: | The QVxPA$ ciliary targeting motif was identified in rhodopsin, as a patch of 5 conserved aminoacids in the C-terminal region. It permits the transport of the photoreceptor from the trans-Golgi network, to the outer segment of the rod retinal cells through mediation of the small GTPases of the Arf family. |
| Pattern: | QV.P.$ |
| Pattern Probability: | 4.319e-07 |
| Present in taxon: | Vertebrata |
| Interaction Domain: |
Arf (PF00025)
ADP-ribosylation factor family
(Stochiometry: 1 : 1)
|
| Acc., Gene-, Name | Start | End | Subsequence | Logic | #Ev. | Organism | Notes |
|---|---|---|---|---|---|---|---|
| P02699 RHO OPSD_BOVIN |
344 | 348 | GDDEASTTVSKTETSQVAPA | TP | 3 | Bos taurus (Cattle) |