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Estrogen-related receptor gamma

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
ESRRG
Available structures
PDB Ortholog search: PDBe RCSB
List of PDB id codes

1KV6, 1TFC, 1VJB, 2E2R, 2EWP, 2GP7, 2GPO, 2GPP, 2GPU, 2GPV, 2P7A, 2P7G, 2P7Z, 2ZAS, 2ZBS, 2ZKC

Identifiers
Aliases ESRRG , ERR3, ERRgamma, NR3B3, estrogen related receptor gamma, ERRg, ERR-gamma
External IDsOMIM: 602969; MGI: 1347056; HomoloGene: 55581; GeneCards: ESRRG; OMA:ESRRG - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr. Chromosome 1 (human) [1]
Band 1q41Start216,503,246 bp [1]
End217,137,755 bp [1]
Gene location (Mouse)
Chromosome 1 (mouse)
Chr. Chromosome 1 (mouse)[2]
Band 1|1 H5- H6Start187,340,988 bp [2]
End187,947,082 bp [2]
RNA expression pattern
Bgee
Human Mouse (ortholog)
  • Pons

  • kidney tubule

  • endothelial cell

  • renal medulla

  • Brodmann area 23

  • right ventricle

  • parotid gland

  • thoracic diaphragm

  • Epithelium of choroid plexus

  • biceps brachii
  • pontine nuclei

  • deep cerebellar nuclei

  • medial vestibular nucleus

  • epithelium of stomach

  • lateral geniculate nucleus

  • submandibular gland

  • pineal gland

  • globus pallidus

  • dorsal tegmental nucleus

  • facial motor nucleus
More reference expression data
BioGPS


Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2104

26381

Ensembl

ENSG00000196482

ENSMUSG00000026610

UniProt

P62508

P62509

RefSeq (mRNA)
NM_001134285
NM_001243505
NM_001243506
NM_001243507
NM_001243509

NM_001243510
NM_001243511
NM_001243512
NM_001243513
NM_001243514
NM_001243515
NM_001243518
NM_001243519
NM_001438
NM_206594
NM_206595
NM_001350122
NM_001350123
NM_001350124
NM_001350125

NM_001243792
NM_011935
NM_001357534
NM_001357535
NM_001357536

RefSeq (protein)
NP_001127757
NP_001230434
NP_001230435
NP_001230436
NP_001230438

NP_001230439
NP_001230440
NP_001230441
NP_001230442
NP_001230443
NP_001230444
NP_001230447
NP_001230448
NP_001429
NP_996317
NP_996318
NP_001337051
NP_001337052
NP_001337053
NP_001337054

NP_001230721
NP_036065
NP_001344463
NP_001344464
NP_001344465

Location (UCSC)Chr 1: 216.5 – 217.14 Mb Chr 1: 187.34 – 187.95 Mb
PubMed search[3] [4]
Wikidata

Estrogen-related receptor gamma (ERR-gamma), also known as NR3B3 (nuclear receptor subfamily 3, group B, member 3), is a nuclear receptor that in humans is encoded by the ESRRG (EStrogen Related Receptor Gamma) gene.[5] [6] [7] It behaves as a constitutive activator of transcription.[8]

This protein is a member of nuclear hormone receptor family of steroid hormone receptors. No physiological activating ligand is known for this orphan receptor, but 4-hydroxytamoxifen and diethylstilbestrol act as inverse agonists and deactivate ESRRG.[9] It also seems to be the target of bisphenol A (see below).

Bisphenol A binding

[edit ]
Further information: Bisphenol A

There is evidence that bisphenol A functions as a xenoestrogen by binding strongly to ERR-γ.[8] BPA as well as its nitrated and chlorinated metabolites seems to binds strongly to ERR-γ (dissociation constant = 5.5 nM), but not to the estrogen receptor (ER).,[8] [10] BPA binding to ERR-γ preserves its basal constitutive activity.[8] It can also protect it from deactivation from the selective estrogen receptor modulator 4-hydroxytamoxifen.[8]

Different expression of ERR-γ in different parts of the body may account for variations in bisphenol A effects. For instance, ERR-γ has been found in high concentration in the placenta, explaining reports of high bisphenol A accumulation there.[11]

References

[edit ]
  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000196482Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000026610Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: ESRRG estrogen-related receptor gamma".
  6. ^ Eudy JD, Yao S, Weston MD, Ma-Edmonds M, Talmadge CB, Cheng JJ, Kimberling WJ, Sumegi J (Jun 1998). "Isolation of a gene encoding a novel member of the nuclear receptor superfamily from the critical region of Usher syndrome type IIa at 1q41". Genomics. 50 (3): 382–4. doi:10.1006/geno.1998.5345. PMID 9676434.
  7. ^ Chen F, Zhang Q, McDonald T, Davidoff MJ, Bailey W, Bai C, Liu Q, Caskey CT (Mar 1999). "Identification of two hERR2-related novel nuclear receptors utilizing bioinformatics and inverse PCR". Gene. 228 (1–2): 101–9. doi:10.1016/S0378-1119(98)00619-2. PMID 10072763.
  8. ^ a b c d e Matsushima A, Kakuta Y, Teramoto T, Koshiba T, Liu X, Okada H, Tokunaga T, Kawabata S, Kimura M, Shimohigashi Y (Oct 2007). "Structural evidence for endocrine disruptor bisphenol A binding to human nuclear receptor ERR gamma". Journal of Biochemistry. 142 (4): 517–24. doi:10.1093/jb/mvm158. PMID 17761695.
  9. ^ Huppunen J, Aarnisalo P (Feb 2004). "Dimerization modulates the activity of the orphan nuclear receptor ERRgamma". Biochemical and Biophysical Research Communications. 314 (4): 964–70. doi:10.1016/j.bbrc.2003年12月19日4. PMID 14751226.
  10. ^ Babu S, Vellore NA, Kasibotla AV, Dwayne HJ, Stubblefield MA, Uppu RM (Sep 2012). "Molecular docking of bisphenol A and its nitrated and chlorinated metabolites onto human estrogen-related receptor-gamma". Biochemical and Biophysical Research Communications. 426 (2): 215–20. doi:10.1016/j.bbrc.2012年08月06日5. PMID 22935422.
  11. ^ Takeda Y, Liu X, Sumiyoshi M, Matsushima A, Shimohigashi M, Shimohigashi Y (Jul 2009). "Placenta expressing the greatest quantity of bisphenol A receptor ERR{gamma} among the human reproductive tissues: Predominant expression of type-1 ERRgamma isoform". Journal of Biochemistry. 146 (1): 113–22. doi:10.1093/jb/mvp049. PMID 19304792.

Further reading

[edit ]
PDB gallery
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2 /EREBP -related factors
(0.6) Miscellaneous

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