Pull requests: nextflow-io/nextflow

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Pull requests list

Bring workflow outputs out of preview

#6487 opened Oct 14, 2025 by bentsherman • Draft 25.10

Optimize exit code handling by relying on scheduler status for successful executions

#6484 opened Oct 14, 2025 by jorgee

docs: Update trace table columns in reports.md

#6483 opened Oct 13, 2025 by JustinBellavance

Type checking support

#6482 opened Oct 13, 2025 by bentsherman • Draft 25.10

Make notifyEvent asynchronous

#6471 opened Oct 11, 2025 by rcannood

docs: Add admonition to inputs and index words

#6461 opened Oct 9, 2025 by christopher-hakkaart

Track remote input file in FileHolder

#6460 opened Oct 8, 2025 by bentsherman

25.10

Add .command.log redirection in K8s container command when Fusion is not enabled executor/k8s

#6455 opened Oct 7, 2025 by jorgee

Add staging events to the TraceObserverV2

#6443 opened Oct 2, 2025 by rcannood

Fix #6182: Add Google Batch LogsPolicy PATH option for GCS bucket log... executor/google-batch

#6431 opened Sep 26, 2025 by dglazer

enhance: Upgrade Claude Code hooks with advanced JSON reporting

#6429 opened Sep 25, 2025 by edmundmiller

@edmundmiller

Determine Azure directories more accurately using metadata and blob properties storage/azure

#6428 opened Sep 25, 2025 by adamrtalbot

Fix: tolerate spaces in $NXF_TASK_WORKDIR software/bash

#6421 opened Sep 23, 2025 by TheLostLambda

Limit S3 client connections when using virtual threads storage/aws

#6369 opened Aug 28, 2025 by jorgee

25.10

Typed processes lang/processes

#6368 opened Aug 27, 2025 by bentsherman

3 tasks done

25.10

112

Support running nextflow script in cygwin software/bash

#6367 opened Aug 27, 2025 by markwoon

Use Managed Identities with Azure to download and upload files executor/azure-batch

#6344 opened Aug 14, 2025 by adamrtalbot

Package directive

#6342 opened Aug 14, 2025 by edmundmiller • Draft

@edmundmiller

WIP: Capture all comments in parser

#6332 opened Aug 7, 2025 by ErikDanielsson • Draft

Add s3 checksum algorithm storage/aws

#6321 opened Jul 31, 2025 by jorgee • Draft 26.04

Use ECS properties instead of container properties executor/aws-batch

#6270 opened Jul 11, 2025 by jorgee

Prevent using Azure Low Priority VMs when using Batch Managed mode

#6267 opened Jul 10, 2025 by adamrtalbot • Draft

@adamrtalbot

Include support for git-remote-s3 software/git

#6260 opened Jul 9, 2025 by jorgee

5 tasks done

Ignore secrets in stub run

#6256 opened Jul 7, 2025 by bentsherman • Draft

Add SQLite based cache store

#6255 opened Jul 6, 2025 by pditommaso • Draft

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Pull requests list