GO.db

This is the development version of GO.db; for the stable release version, see GO.db.

A set of annotation maps describing the entire Gene Ontology

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DOI: 10.18129/B9.bioc.GO.db

Bioconductor version: Development (3.23)

A set of annotation maps describing the entire Gene Ontology assembled using data from GO

Author: Marc Carlson

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("GO.db")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("GO.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews AnnotationData, FunctionalAnnotation

Version 3.22.0

License Artistic-2.0

Depends R (>= 2.7.0), methods, AnnotationDbi(>= 1.71.1)

Imports

System Requirements

URL

Suggests DBI

Linking To

Enhances

Depends On Me annaffy, BicARE, geneXtendeR, goProfiles, goTools, SemDist, topGO, Homo.sapiens, Mus.musculus, Rattus.norvegicus, davidTiling, RnaSeqGeneEdgeRQL, OSCA.basic, GOxploreR

Imports Me ADAM, ADAMgui, adSplit, bioCancer, BioNAR, clusterProfiler, CNEr, compEpiTools, consICA, EnrichmentBrowser, gage, GeneTonic, GenomicInteractionNodes, GOpro, GOSemSim, goseq, goSTAG, GOstats, goTools, ideal, MCbiclust, methylGSA, missMethyl, mosdef, NetSAM, NoRCE, pcaExplorer, rGREAT, rgsepd, rrvgo, simplifyEnrichment, ViSEAGO, BiSEp, PathwayVote, randomGODB, WGCNA

Suggests Me annotate, AnnotationDbi, AnnotationForge, appreci8R, BiocSet, Category, categoryCompare, ChIPpeakAnno, dmGsea, esetVis, fgga, FGNet, GlobalAncova, globaltest, goSorensen, GSEABase, hpar, InteractiveComplexHeatmap, iSEEpathways, iSEEu, limma, mgsa, MLP, oppar, phenoTest, pRoloc, RTopper, safe, scde, simona, sparrow, SpliceWiz, systemPipeR, TFutils, BioMartGOGeneSets, SomaScan.db, chipenrich.data, msigdb, RforProteomics, yeastExpData, BaseSet, CALANGO, clValid, conos, corrselect, DrDimont, goat, maGUI, pagoda2, sand, scITD

Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package GO.db_3.22.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Package Short Url https://bioconductor.org/packages/GO.db/

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