org.Mm.eg.db

This is the released version of org.Mm.eg.db; for the devel version, see org.Mm.eg.db.

Genome wide annotation for Mouse

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DOI: 10.18129/B9.bioc.org.Mm.eg.db

Bioconductor version: Release (3.22)

Genome wide annotation for Mouse, primarily based on mapping using Entrez Gene identifiers.

Author: Marc Carlson

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("org.Mm.eg.db")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("org.Mm.eg.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews AnnotationData, Mus_musculus, OrgDb, mouseLLMappings

Version 3.22.0

License Artistic-2.0

Depends R (>= 2.7.0), methods, AnnotationDbi(>= 1.71.1)

Imports

System Requirements

URL

See More

Suggests DBI, annotate, RUnit

Linking To

Enhances

Depends On Me clariomsmousehttranscriptcluster.db, clariomsmousetranscriptcluster.db, htmg430a.db, htmg430b.db, htmg430pm.db, illuminaMousev1.db, illuminaMousev1p1.db, illuminaMousev2.db, lumiMouseAll.db, m10kcod.db, m20kcod.db, mgu74a.db, mgu74av2.db, mgu74b.db, mgu74bv2.db, mgu74c.db, mgu74cv2.db, mguatlas5k.db, mgug4104a.db, mgug4120a.db, mgug4121a.db, mgug4122a.db, mi16cod.db, mm24kresogen.db, MmAgilentDesign026655.db, moe430a.db, moe430b.db, moex10stprobeset.db, moex10sttranscriptcluster.db, mogene10stprobeset.db, mogene10sttranscriptcluster.db, mogene11stprobeset.db, mogene11sttranscriptcluster.db, mogene20stprobeset.db, mogene20sttranscriptcluster.db, mogene21stprobeset.db, mogene21sttranscriptcluster.db, mouse4302.db, mouse430a2.db, mpedbarray.db, mta10probeset.db, mta10transcriptcluster.db, mu11ksuba.db, mu11ksubb.db, Mu15v1.db, mu19ksuba.db, mu19ksubb.db, mu19ksubc.db, Mu22v3.db, Mus.musculus, mwgcod.db, nugomm1a520177.db, annotation, RnaSeqGeneEdgeRQL, csawBook, OSCA.advanced, OSCA.basic, OSCA.workflows

Imports Me APL, cellity, chimeraviz, chipenrich, debrowser, EasyCellType, EGSEA, GmicR, Rmmquant, rTRMui, scPipe, tenXplore, TFEA.ChIP, msigdb, convertid, Grouphmap, HiCociety, SurprisalAnalysis

Suggests Me annotate, annotatr, artMS, autonomics, CAGEfightR, CellTrails, compEpiTools, CRISPRseek, csaw, destiny, dmGsea, enhancerHomologSearch, FELLA, fgsea, gatom, gCrisprTools, geneXtendeR, GenomicFeatures, goSorensen, GRaNIE, iSEEfier, karyoploteR, linkSet, MLP, multiGSEA, NanoMethViz, NetSAM, NoRCE, ontoProc, Organism.dplyr, pathview, phantasus, PhosR, ReportingTools, rGREAT, RnBeads, rrvgo, rTRM, scGraphVerse, singleCellTK, tidybulk, tricycle, ViSEAGO, vissE, chipenrich.data, CAGEWorkflow, chipseqDB, ExpHunterSuite, simpleSingleCell, bulkAnalyseR, conos, goat, limorhyde, pagoda2, WGCNA

Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package org.Mm.eg.db_3.22.0.tar.gz

Windows Binary (x86_64)

macOS Binary (x86_64)

macOS Binary (arm64)

Package Short Url https://bioconductor.org/packages/org.Mm.eg.db/

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