Differential Analysis of Rhythmic Transcriptome Data [R package limorhyde version 1.0.1]

Jake Hughey

limorhyde: Differential Analysis of Rhythmic Transcriptome Data

A flexible approach, inspired by cosinor regression, for differential analysis of rhythmic transcriptome data. See Singer and Hughey (2018) <doi:10.1177/0748730418813785>.

Version: 1.0.1

Depends: R (≥ 3.4)

Imports: pbs (≥ 1.1)

Suggests: annotate (≥ 1.58.0), data.table (≥ 1.12.2), foreach (≥ 1.4.4), ggplot2 (≥ 2.2.1), knitr (≥ 1.20), limma (≥ 3.36.1), matrixStats (≥ 0.56.0), org.Mm.eg.db (≥ 3.6.0), qs (≥ 0.25.2), rmarkdown (≥ 1.9), testthat (≥ 3.0.4)

Published: 2022年02月18日

DOI: 10.32614/CRAN.package.limorhyde

Author: Jake Hughey [aut, cre], Jordan Singer [ctb]

Maintainer: Jake Hughey <jakejhughey at gmail.com>

BugReports: https://github.com/hugheylab/limorhyde/issues

License: GPL-2

URL: https://limorhyde.hugheylab.org, https://github.com/hugheylab/limorhyde

NeedsCompilation: no

Materials: NEWS

CRAN checks: limorhyde results