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ExperimentHub

This is the development version of ExperimentHub; for the stable release version, see ExperimentHub.

Client to access ExperimentHub resources


Bioconductor version: Development (3.23)

This package provides a client for the Bioconductor ExperimentHub web resource. ExperimentHub provides a central location where curated data from experiments, publications or training courses can be accessed. Each resource has associated metadata, tags and date of modification. The client creates and manages a local cache of files retrieved enabling quick and reproducible access.

Author: Bioconductor Package Maintainer [cre], Martin Morgan [aut], Marc Carlson [ctb], Dan Tenenbaum [ctb], Sonali Arora [ctb], Valerie Oberchain [ctb], Kayla Morrell [ctb], Lori Shepherd [aut]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("ExperimentHub")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("ExperimentHub")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ExperimentHub")
ExperimentHub: Access the ExperimentHub Web Service HTML R Script
Reference Manual PDF
NEWS Text

Details

Version 3.1.0
In Bioconductor since BioC 3.4 (R-3.3) (9 years)
License Artistic-2.0
Depends methods, BiocGenerics(>= 0.15.10), AnnotationHub(>= 3.99.3), BiocFileCache(>= 2.99.3)
Imports utils, S4Vectors, BiocManager, rappdirs
System Requirements
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Follow Installation instructions to use this package in your R session.

Windows Binary (x86_64)
macOS Binary (x86_64) ExperimentHub_3.1.0.tgz
macOS Binary (arm64) ExperimentHub_3.1.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ExperimentHub
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ExperimentHub
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