Data collection: zoonoses, antimicrobial resistance and food-borne
Deadlines for 2024 data reporting and validation
The milestones of 2024 data reporting as agreed during the Zoonoses Network meeting:
1 April 2025
Opening of the reporting period
31 May 2025 (legal deadline)
Closure of the reporting period
EU Summary tables will be displayed in MicroStrategy reports; any change in data during the data reporting and correction periods will be displayed automatically in the EU summary reports in MicroStrategy the day following a dataset submission.
Submission of new datasets after the deadline will not be allowed; Text forms should be reported by the legal deadline.
2 – 12 June 2025
First validation period
13 June 2025
Letters requesting scientific clarifications and/or amendments (if needed) sent to the MSs
13 – 29 June 2025
First data correction by MSs
30 June – 9 July 2025
Final validation period
10 July 2025
Second letters requesting scientific clarifications and/or corrections (if needed) sent to the MSs
10 – 18 July 2025
Final data correction
By 22 July 2025
Acceptance of data in the Scientific Datawarehouse (DWH)
22 July 2025
EFSA validates the final submitted and corrected data (against several criteria)
EFSA validates the final submitted and corrected data (against several criteria). After 22 July 2025, data cannot be changed, as data extracted on this date will be used to draft the 2024 EUOHZ. Erroneous data (e.g. combination of matrix/pathogen) will not be included in the analysis.
Guidelines for reporting data on zoonoses, antimicrobial resistance and food-borne
- Manual for reporting on 2024 zoonoses, zoonotic agents and on some other pathogenic microbiological agents under Directive 2003/99/EC
- Manual for reporting 2024 antimicrobial resistance data under Directive 2003/99/EC and Commission Implementing Decision (EU) 2020/1729
- Guidance for reporting 2024 data on zoonoses, foodborne outbreaks and antimicrobial resistance
The catalogues extracted in the Excel format
Links to the annual reports
- The European Union One Health integrated, unifying approach that aims to sustainably balance and optimise the health of people, animals and ecosystems Zoonoses Report: 2011 | 2012 | 2013 | 2014 | 2015 | 2016 | 2017 | 2018 | 2019 | 2020 | 2021 | 2022 | 2023
- EU summary report on AMR Abbreviation of "antimicrobial resistance" (see "antimicrobial resistance"). in zoonotic A term given to diseases and infections that can be transmitted between animals and humans and indicator bacteria from humans, animals and food: 2011 | 2012 | 2013 | 2014 | 2015 | 2016 | 2017 | 2018 | 2019 | 2021 | 2022 | 2023
- National zoonoses country reports
Dashboards and story maps
Foodborne outbreaks
Prevalence The proportion of a population found to have a condition
- Echinococcus dashboard
- Echinococcus story map
- Rabies dashboard
- Rabies story map
- Trichinella dashboard
- Trichinella story map
- West Nile virus dashboard
- Yersinia story map
- Toxoplasma gondii story map
- Q-fever story map
- Tularaemia story map
- Salmonella dashboard
- Salmonella story map
- Listeria dashboard
- Listeria monocytogenes story map
- Campylobacter dashboard
- Campylobacter story map
- Brucella dashboard
- Brucella storymap
- Zoonotic tuberculosis dashboard
- Zoonotic tuberculosis storymap
- Shiga toxin-producing Escherichia coli dashboard
- Shiga toxin-producing Escherichia coli storymap
Antimicrobial resistance
Whole genome sequencing
- Guidelines for reporting Whole Genome Sequencing-based typing data through the EFSA One Health WGS System
- Collaboration Agreement on the management and sharing of molecular typing data of isolates from human, food, feed, animal, and the related environment for public health purposes
- EFSA One Health WGS System