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Integrin beta 5

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
ITGB5
Identifiers
Aliases ITGB5 , Integrin, beta 5, integrin subunit beta 5
External IDsOMIM: 147561; MGI: 96614; HomoloGene: 20511; GeneCards: ITGB5; OMA:ITGB5 - orthologs
Gene location (Human)
Chromosome 3 (human)
Chr. Chromosome 3 (human) [1]
Band 3q21.2Start124,761,948 bp [1]
End124,901,418 bp [1]
Gene location (Mouse)
Chromosome 16 (mouse)
Chr. Chromosome 16 (mouse)[2]
Band 16|16 B3Start33,650,035 bp [2]
End33,769,708 bp [2]
RNA expression pattern
Bgee
Human Mouse (ortholog)
  • stromal cell of endometrium

  • right coronary artery

  • ascending aorta

  • Descending thoracic aorta

  • pancreatic ductal cell

  • tendon of biceps brachii

  • cartilage tissue

  • left coronary artery

  • metanephric glomerulus

  • popliteal artery
  • tunica media of zone of aorta

  • epithelium of lens

  • decidua

  • calvaria

  • ciliary body

  • molar

  • external carotid artery

  • gastrula

  • stria vascularis

  • stroma of bone marrow
More reference expression data
BioGPS


Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3693

16419

Ensembl

ENSG00000082781

ENSMUSG00000022817

UniProt

P18084

O70309

RefSeq (mRNA)

NM_002213
NM_001354764
NM_001354765
NM_001354766

NM_001145884
NM_010580

RefSeq (protein)

NP_002204
NP_001341693
NP_001341694
NP_001341695

NP_001139356
NP_034710
NP_001391992

Location (UCSC)Chr 3: 124.76 – 124.9 Mb Chr 16: 33.65 – 33.77 Mb
PubMed search[3] [4]
Wikidata

Integrin beta-5 is a protein that in humans is encoded by the ITGB5 gene.[5] [6]

Interactions

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Integrin, beta 5 has been shown to interact with PTK2,[7] Annexin A5 [8] and PAK4.[9]

Functions

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ITGB5 encodes a subunit of integrin that can interact with the integrin alpha v to form the integrin alpha v beta 5 integrin heterodimer. Integrin alpha V beta 5 is a receptor for the extracellular matrix protein Vitronectin and can form both focal adhesions and reticular adhesions. [10]

Clinical significance

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Research

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Elevated levels of ITGB5 have been found in patients with autosomal dominant osteopetrosis type II, a rare disease of bones.[11]

References

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  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000082781Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000022817Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ McLean JW, Vestal DJ, Cheresh DA, Bodary SC (Nov 1990). "cDNA sequence of the human integrin beta 5 subunit". J Biol Chem. 265 (28): 17126–31. doi:10.1016/S0021-9258(17)44878-2 . PMID 2211615.
  6. ^ "Entrez Gene: ITGB5 integrin, beta 5".
  7. ^ Eliceiri BP, Puente Xose S, Hood John D, Stupack Dwayne G, Schlaepfer David D, Huang Xiaozhu Z, Sheppard Dean, Cheresh David A (Apr 2002). "Src-mediated coupling of focal adhesion kinase to integrin alpha(v)beta5 in vascular endothelial growth factor signaling". J. Cell Biol. 157 (1): 149–60. doi:10.1083/jcb.200109079. ISSN 0021-9525. PMC 2173263 . PMID 11927607.
  8. ^ Cardó-Vila M, Arap Wadih, Pasqualini Renata (May 2003). "Alpha v beta 5 integrin-dependent programmed cell death triggered by a peptide mimic of annexin V". Mol. Cell. 11 (5): 1151–62. doi:10.1016/S1097-2765(03)00138-2 . ISSN 1097-2765. PMID 12769841.
  9. ^ Zhang H, Li Zhilun, Viklund Eva-Karin, Strömblad Staffan (Sep 2002). "P21-activated kinase 4 interacts with integrin alpha v beta 5 and regulates alpha v beta 5-mediated cell migration". J. Cell Biol. 158 (7): 1287–97. doi:10.1083/jcb.200207008. ISSN 0021-9525. PMC 2173231 . PMID 12356872.
  10. ^ DOI: 10.1083/jcb.201811160
  11. ^ Coudert, AE (Mar 2014). "Differentially expressed genes in autosomal dominant osteopetrosis type II osteoclasts reveal known and novel pathways for osteoclast biology" (PDF). Lab. Invest. 94 (3): 275–285. doi:10.1038/labinvest.2013.140 . PMID 24336069. S2CID 5097233.

Further reading

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