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Integrin alpha 10

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
ITGA10
Available structures
PDB Human UniProt search: PDBe RCSB
List of PDB id codes

1PT6, 1QC5, 1QCY, 2L8S, 2M32, 4A0Q

Identifiers
Aliases ITGA10 , PRO827, integrin subunit alpha 10
External IDsOMIM: 604042; MGI: 2153482; HomoloGene: 2697; GeneCards: ITGA10; OMA:ITGA10 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr. Chromosome 1 (human) [1]
Band 1q21.1Start145,891,208 bp [1]
End145,910,111 bp [1]
Gene location (Mouse)
Chromosome 3 (mouse)
Chr. Chromosome 3 (mouse)[2]
Band 3|3 F2.1Start96,552,900 bp [2]
End96,571,835 bp [2]
RNA expression pattern
Bgee
Human Mouse (ortholog)
  • tibia

  • Descending thoracic aorta

  • cartilage tissue

  • ascending aorta

  • right coronary artery

  • Achilles tendon

  • gastric mucosa

  • periodontal fiber

  • left coronary artery

  • right lung
  • facial skeleton

  • calvaria

  • Dermatocranium

  • membranous bone

  • mandible

  • sphenoid bone

  • fossa

  • maxilla

  • basisphenoid

  • body of femur
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

8515

213119

Ensembl

ENSG00000143127

ENSMUSG00000090210

UniProt

O75578

n/a

RefSeq (mRNA)

NM_001303040
NM_001303041
NM_003637

NM_001081053
NM_001302471

RefSeq (protein)

NP_001289969
NP_001289970
NP_003628

n/a

Location (UCSC)Chr 1: 145.89 – 145.91 Mb Chr 3: 96.55 – 96.57 Mb
PubMed search[3] [4]
Wikidata

Integrin alpha-10 also known as ITGA10 is a protein that in humans is encoded by the ITGA10 gene.[5] [6] [7]

Function

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Integrins are integral membrane proteins composed of an alpha chain and a beta chain, and are known to participate in cell adhesion as well as cell-surface mediated signalling. The I-domain containing alpha 10 combines with the integrin beta 1 chain (ITGB1) to form a novel collagen type II-binding integrin expressed in cartilage tissue.[5]

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References

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  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000143127Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000090210Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b "Entrez Gene: ITGA10 integrin, alpha 10".
  6. ^ Camper L, Hellman U, Lundgren-Akerlund E (August 1998). "Isolation, cloning, and sequence analysis of the integrin subunit alpha10, a beta1-associated collagen binding integrin expressed on chondrocytes". J. Biol. Chem. 273 (32): 20383–9. doi:10.1074/jbc.273.32.20383 . PMID 9685391.
  7. ^ Lehnert K, Ni J, Leung E, Gough S, Morris CM, Liu D, Wang SX, Langley R, Krissansen GW (1999). "The integrin alpha10 subunit: expression pattern, partial gene structure, and chromosomal localization" . Cytogenet. Cell Genet. 87 (3–4): 238–44. doi:10.1159/000015434. PMID 10702680. S2CID 85257405.
  8. ^ Klopocki E, Schulze H, Strauss G, et al. (February 2007). "Complex Inheritance Pattern Resembling Autosomal Recessive Inheritance Involving a Microdeletion in Thrombocytopenia–Absent Radius Syndrome". Am. J. Hum. Genet. 80 (2): 232–40. doi:10.1086/510919. PMC 1785342 . PMID 17236129.

Further reading

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This article incorporates text from the United States National Library of Medicine, which is in the public domain.


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