References Associated with Literature Topic: Genomic co-immunoprecipitation study

Reference	Species	Genes Addressed
*Hernandez-Hernandez G, et al.* (2024)** Abf1 negatively regulates the expression of EPA1 and affects adhesion in Candida glabrata. J Med Microbiol 73(10) CGD Papers Entry Pubmed Entry	C. glabrata	\|ABF1 \|EPA1 \|EPA2 \|RAP1
*She X, et al.* (2024)** Histone-like transcription factor Hfl1p in Candida albicans harmonizes nuclear and mitochondrial genomic network in regulation of energy metabolism and filamentation development. Virulence 15(1):2412750 CGD Papers Entry Pubmed Entry	C. albicans	\|HFL1
*Fletcher J, et al.* (2023)** Deletion of the Candida albicans TLO gene family using CRISPR-Cas9 mutagenesis allows characterisation of functional differences in alpha-, beta- and gamma- TLO gene function. PLoS Genet 19(12):e1011082 CGD Papers Entry Pubmed Entry	C. albicans	\|ALS3 \|CTA2 \|CTA24 \|CTA26 \|ECE1 \|GAL4 \|HSP30 \|HWP1 \|HYR1 \|MED3 \|OP4 \|RBR1 \|SKO1 \|TLO1 \|MORE
*Jiang L, et al.* (2023)** Transcriptional expression of PHR2 is positively controlled by the calcium signaling transcription factor Crz1 through its binding motif in the promoter. Microbiol Spectr :e0168923 CGD Papers Entry Pubmed Entry	C. albicans	\|CRZ1 \|PHR2 \|RIM101
*Vu BG, et al.* (2023)** Calcineurin is required for Candida glabrata Pdr1 transcriptional activation. mBio :e0241623 CGD Papers Entry Pubmed Entry	C. glabrata	\|CDR1 \|CNA1 \|CNB1 \|PDR1
*Delaveau T, et al.* (2021)** Yap5 Competes With Hap4 for the Regulation of Iron Homeostasis Genes in the Human Pathogen Candida glabrata Front Cell Infect Microbiol 11:731988 CGD Papers Entry Pubmed Entry	C. glabrata	\|AP5 \|CCC1 \|GLT1 \|GRX4 \|HAP4 \|HAP5 \|ISA1
*Nair R, et al.* (2018)** Identification of genome-wide binding sites of heat shock factor 1, Hsf1, under basal conditions in the human pathogenic yeast, Candida albicans. AMB Express 8(1):116 CGD Papers Entry Pubmed Entry	C. albicans	\|CTA8
*Tebbji F, et al.* (2017)** The Genomic Landscape of the Fungus-Specific SWI/SNF Complex Subunit, Snf6, in Candida albicans. mSphere 2(6) CGD Papers Entry Pubmed Entry Web Supplement Data	C. albicans	\|SNF6
*Leach MD, et al.* (2016)** Hsf1 and Hsp90 orchestrate temperature-dependent global transcriptional remodelling and chromatin architecture in Candida albicans. Nat Commun 7:11704 CGD Papers Entry Pubmed Entry Web Supplement Data	C. albicans	\|ALS1 \|ALS3 \|CTA8 \|HSP90 \|ROB1
*Merhej J, et al.* (2016)** A Network of Paralogous Stress Response Transcription Factors in the Human Pathogen Candida glabrata. Front Microbiol 7:645 CGD Papers Entry Pubmed Entry Web Supplement Data	C. glabrata	\|AP1 \|AP5 \|CAD1 \|GRX4 \|YAP3 \|YAP3b \|YAP6 \|YAP7
*Tebung WA, et al.* (2016)** Rewiring of the Ppr1 Zinc Cluster Transcription Factor from Purine Catabolism to Pyrimidine Biogenesis in the Saccharomycetaceae. Curr Biol 26(13):1677-1687 CGD Papers Entry Pubmed Entry Web Supplement Data	C. albicans	\|AHP2 \|ALG11 \|ARG4 \|C1_02410C_A \|C1_04110W_A \|C1_04720W_A \|C1_05520W_A \|C1_06390W_A \|C1_07490C_A \|C1_10200C_A \|C2_00180C_A \|C2_00630C_A \|C2_08460C_A \|C3_00210C_A \|MORE
*Paul S, et al.* (2014)** Identification of genomic binding sites for Candida glabrata Pdr1 transcription factor in wild-type and rho0 cells. Antimicrob Agents Chemother 58(11):6904-12 CGD Papers Entry Pubmed Entry Reference LINKOUT	C. glabrata	\|ATF2 \|CAGL0A01650g \|CAGL0B02101g \|CAGL0C02937g \|CAGL0E05588g \|CAGL0I02574g \|CAGL0I07249g \|CAGL0J05852g \|CAGL0K05819g \|CAGL0K09702g \|CDR1 \|IPT1 \|LAF1 \|MEC3 \|MORE
C. albicans	\|CDR1
*Perez JC, et al.* (2013)** Candida albicans commensalism and pathogenicity are intertwined traits directed by a tightly knit transcriptional regulatory circuit. PLoS Biol 11(3):e1001510 CGD Papers Entry Pubmed Entry Web Supplement Data	C. albicans	\|C2_08540C_A \|DFI1 \|DFI1 \|GAL10 \|GAL10 \|HAP41 \|HAP41 \|HMS1 \|HMS1 \|LYS14 \|LYS14 \|LYS144 \|LYS144 \|NCE102 \|MORE
*Schaekel A, et al.* (2013)** Morphogenesis-regulated localization of protein kinase A to genomic sites in Candida albicans. BMC Genomics 14:842 CGD Papers Entry Pubmed Entry Reference LINKOUT Data	C. albicans	\|BCY1 \|BCY1 \|EFG1 \|EFG1 \|TPK1 \|TPK1 \|TPK2 \|TPK2
*Nobile CJ, et al.* (2012)** A recently evolved transcriptional network controls biofilm development in Candida albicans. Cell 148(1-2):126-38 CGD Papers Entry Pubmed Entry Reference LINKOUT Data	C. albicans	\|ALS1 \|ALS1 \|BCR1 \|BCR1 \|BRG1 \|BRG1 \|C1_01510W_A \|CAN2 \|CAN2 \|EFG1 \|EFG1 \|EHT1 \|EHT1 \|GRF10 \|MORE
*Askew C, et al.* (2011)** The zinc cluster transcription factor Ahr1p directs Mcm1p regulation of Candida albicans adhesion. Mol Microbiol 79(4):940-53 CGD Papers Entry Pubmed Entry Reference LINKOUT Reference LINKOUT Data	C. albicans	\|AHR1 \|AHR1 \|MCM1 \|MCM1
*Chen C, et al.* (2011)** An iron homeostasis regulatory circuit with reciprocal roles in Candida albicans commensalism and pathogenesis. Cell Host Microbe 10(2):118-35 CGD Papers Entry Pubmed Entry Data	C. albicans	\|AAT1 \|AAT1 \|ACO1 \|ACO1 \|AFG1 \|AFG1 \|AGP2 \|AGP2 \|ATM1 \|ATM1 \|ATS1 \|ATS1 \|BMT9 \|BMT9 \|MORE
*Lassak T, et al.* (2011)** Target specificity of the Candida albicans Efg1 regulator. Mol Microbiol 82(3):602-18 CGD Papers Entry Pubmed Entry Reference LINKOUT Data	C. albicans	\|CZF1 \|CZF1 \|DEF1 \|DEF1 \|EFG1 \|EFG1 \|FGR17 \|FGR17 \|NRG1 \|NRG1 \|RFG1 \|RFG1 \|TCC1 \|TCC1 \|MORE
*Lavoie H, et al.* (2010)** Evolutionary tinkering with conserved components of a transcriptional regulatory network. PLoS Biol 8(3):e1000329 CGD Papers Entry Pubmed Entry Reference LINKOUT Reference LINKOUT Reference LINKOUT Reference LINKOUT Web Supplement	C. albicans	\|CBF1 \|CBF1 \|CDC28 \|CDC28 \|CLN3 \|CLN3 \|FHL1 \|FHL1 \|FKH2 \|FKH2 \|HHT1 \|HHT1 \|HHT2 \|HHT2 \|MORE
*Askew C, et al.* (2009)** Transcriptional regulation of carbohydrate metabolism in the human pathogen Candida albicans. PLoS Pathog 5(10):e1000612 CGD Papers Entry Pubmed Entry Reference LINKOUT Reference LINKOUT Reference LINKOUT	C. albicans	\|GAL4 \|GAL4 \|TYE7 \|TYE7
*Ketel C, et al.* (2009)** Neocentromeres form efficiently at multiple possible loci in Candida albicans. PLoS Genet 5(3):e1000400 CGD Papers Entry Pubmed Entry Reference LINKOUT Reference LINKOUT Reference LINKOUT	C. albicans	\|C5_00030W_A \|C5_02060W_A \|C5_02070C_A \|C5_03640W_A \|C5_03650C_A \|C5_03690W_A \|C5_03700C_A \|CSE4 \|CSE4 \|GIT2 \|GIT2 \|GIT3 \|GIT3 \|GIT4 \|MORE
*Sellam A, et al.* (2009)** Role of Ndt80p in sterol metabolism regulation and azole resistance in Candida albicans. Eukaryot Cell 8(8):1174-83 CGD Papers Entry Pubmed Entry Reference LINKOUT Data	C. albicans	\|ERG1 \|ERG1 \|ERG10 \|ERG10 \|ERG11 \|ERG11 \|ERG13 \|ERG13 \|ERG2 \|ERG2 \|ERG24 \|ERG24 \|ERG25 \|ERG25 \|MORE
*Znaidi S, et al.* (2009)** Identification of the Candida albicans Cap1p regulon. Eukaryot Cell 8(6):806-20 CGD Papers Entry Pubmed Entry Data	C. albicans	\|CAP1 \|CAP1 \|CAT1 \|CAT1 \|DNF2 \|FCR1 \|FCR1 \|FLU1 \|FLU1 \|GIT3 \|GIT3 \|GLR1 \|GLR1 \|GST1 \|MORE
*Hogues H, et al.* (2008)** Transcription factor substitution during the evolution of fungal ribosome regulation. Mol Cell 29(5):552-62 CGD Papers Entry Pubmed Entry Reference LINKOUT Data	C. albicans	\|C1_10350C_A \|C1_10730W_A \|C1_14200W_A \|C3_00640W_A \|C3_04690C_A \|C7_01000C_A \|CBF1 \|CBF1 \|CDA2 \|CDA2 \|CFL5 \|CFL5 \|CRP1 \|CRP1 \|MORE
*Lavoie H, et al.* (2008)** A toolbox for epitope-tagging and genome-wide location analysis in Candida albicans. BMC Genomics 9:578 CGD Papers Entry Pubmed Entry Data	C. albicans	\|ARG3 \|ARG3 \|ARG5,6 \|ARG5,6 \|ARG8 \|ARG8 \|BUD21 \|BUD21 \|CAR1 \|CAR1 \|CBF1 \|CBF1 \|CDC46 \|CDC46 \|MORE
*Tuch BB, et al.* (2008)** The evolution of combinatorial gene regulation in fungi. PLoS Biol 6(2):e38 CGD Papers Entry Pubmed Entry Reference LINKOUT Reference LINKOUT Reference LINKOUT Web Supplement Web Supplement Web Supplement Web Supplement Web Supplement Web Supplement Web Supplement Web Supplement Web Supplement Web Supplement Web Supplement Data	C. albicans	\|ARG81 \|ARG81 \|ASE1 \|ASE1 \|C6_01780C_A \|CDC20 \|CDC20 \|CDC5 \|CDC5 \|CDC6 \|CDC6 \|CHS2 \|CHS2 \|CLN3 \|MORE
*Liu TT, et al.* (2007)** Genome-wide expression and location analyses of the Candida albicans Tac1p regulon. Eukaryot Cell 6(11):2122-38 CGD Papers Entry Pubmed Entry Reference LINKOUT Data	C. albicans	\|ATF1 \|ATF1 \|C1_10280C_A \|C2_07440C_A \|C6_01780C_A \|C6_02560W_A \|C7_00770W_A \|C7_02140W_A \|CDR1 \|CDR1 \|CDR2 \|CDR2 \|CR_05860W_A \|GPX1 \|MORE
*Zordan RE, et al.* (2007)** Interlocking transcriptional feedback loops control white-opaque switching in Candida albicans. PLoS Biol 5(10):e256 CGD Papers Entry Pubmed Entry Reference LINKOUT Data	C. albicans	\|AHR1 \|AHR1 \|CSR1 \|CSR1 \|CZF1 \|CZF1 \|EFG1 \|EFG1 \|HAP3 \|HAP3 \|OFI1 \|PHO23 \|PHO23 \|RFG1 \|MORE

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