Tomoya Baba

Misc.

• STRATEGIC PROPOSAL: Strengthening the Implementation of Mission-Oriented STI Policy in Japan

  CRDS-FY2026-SP-03, Jun, 2026
• 科学技術未来戦略ワークショップ報告書:ミッション志向型科学技術・イノベーション政策の立案と実行のさらなる展開

  JST 研究開発戦略センター(CRDS), CRDS-FY2025-WR-09, Mar, 2026
• 第12回科学技術予測調査 2050未来シナリオ報告書〜融境・超境による共生:色んな「何か」と色んな自分を生きる〜

  科学技術・学術政策研究所 (NISTEP) 科学技術予測調査 報告書, 調査資料(353), Mar, 2026
• ナノ空間反応場を利用した1分子DNA増幅システムの構築

  松浦 俊一, 馬場 知哉, 千葉 真奈美, 角田 達朗, 山口 有朋

  第68回 日本生物工学会大会 トピックス集, 9-10, Aug, 2016
• A Domain-Specific Language in Scala for the Analysis of Metabolic Pathways

  32 8p, Sep 9, 2015
• Predicting Gene Knockout Effects on E. coli by Minimal Active Pathway Enumeration

  2012(7) 1-6, Jan 5, 2012
• PF-01 Microfloral association for nitrogen cycling in an Antarctic moss pillar inferred from phylogenetic and isotopic analyses(PF Natural material cycle/geomicrobiology,Poster session)

  Nakai Ryosuke, Abe Takashi, Baba Tomoya, Imura Satoshi, Kagoshima Hiroshi, Kanda Hiroshi, Kohara Yuji, Niki Hironori, Yanagihara Katsuhiko, Naganuma Takeshi

  (28) 157-157, 2012
• Predicting Gene Knockout Effects by Minimal Pathway Enumeration

  Takehide Soh, Katsumi Inoue, Tomoya Baba, Toyoyuki Takada, Toshihiko Shiroishi

  International Conference on Bioinformatics, Biocomputational Systems and Biotechnologies, 4 11-19, 2012 Peer-reviewed
• Complete genome sequence and comparative analysis of Shewanella violacea, a psychrophilic and piezophilic bacterium from deep sea floor sediments

  Aono E, Baba T, Ara T, Nishi T, Nakamichi1 T, Inamoto E, Toyonaga H, Hasegawa M, Takai Y, Okumura Y …

  Mol. Biosyst., 6 1216-1226, 2010
• Systematic genome-wide scanning for genes involved in ATP generation in Escherichia coli

  Hara KY, Shimodate N, Ito M, Baba T, Mori H, Mori H

  Metab. Eng., 11(1) 1-7, 2009
• Glutathione Production by Efficient ATP Regenerating Escherichia coli Mutants

  Hara KY, Shimodate N, Hirokawa Y, Ito M, Baba T, Mori H, Mori H

  FEMS Microbiol. Lett., 297(2) 217-224, 2009
• Genome structure of the legume, Lotus japonicus

  Sato S, Nakamura Y, Kaneko T, Asamizu E, Kato T, Nakao M, Sasamoto S, Watanabe A, Ono A, Kawashima K …

  DNA Res., 15(4) 227-239, 2008
• The construction of systematic in-frame, single-gene knockout mutant collection in Escherichia coli K-12

  Baba T, Mori H

  Methods Mol. Biol., 416 171-181, 2008
• The applications of systematic in-frame, single-gene knockout mutant collection of Escherichia coli K-12

  Baba T, Huan HC, Datsenko K, Wanner BL, Mori H

  Methods Mol. Biol., 416 183-194, 2008
• マルチオミクスによる大腸菌の遺伝・環境変化に対する応答解析

  石井伸佳, 中東憲治, 馬場知哉, ROBERT Martin, 曽我朋義, 金井昭夫, 平沢敬, 那波幹, 平井健太, HOQUE Aminul …

  生化学, 3S2-6, 2008
• High-Throughput Fluorescence Labeling of Full-Length cDNA Products based on a Reconstituted Translation System

  Kawahashi Y, Doi N, Oishi Y, Tsuda C, Takashima H, Baba T, Mori H, Ito T, Yanagawa H

  J. Biochem., 141(1) 19-24, 2007
• Multiple high-throughput analyses monitor the response of E. coli to perturbations

  Ishii N, Nakahigashi K, Baba T, Robert M, Soga T, Kanai A, Hirasawa T, Naba M, Hirai K, Hoque A …

  Science, 316(5824) 593-597, 2007
• 大腸菌代謝ネットワークのmulti‐omics解析

  石井伸佳, 中東憲治, 馬場知哉, ROBERT Martin, 曽我朋義, 金井昭夫, 平沢敬, 那波幹, 平井健太, HOQUE Aminul …

  高度好熱菌丸ごと一匹プロジェクト 第6回連携研究会 理研シンポジウム 平成19年, 12-13, 2007
• 網羅的ハイスループット解析による大腸菌の遺伝的・環境的変動への応答の観測

  石井伸佳, 中東憲治, 馬場知哉, ROBERT Martin, 曽我朋義, 金井昭夫, 平沢敬, 那波幹, 平井健太, HOQUE Aminul …

  生化学, 1P-1021, 2007
• Evaluation of Document Processing Techniques Towards Escherichia coli Bibliographic Database

  Horai H, Baba T, Doi K, Mitsumori T, Yamamoto N, Mori H, Doi H

  Information Processing Society of Japan, Special Interest Groups, Bioinformatics, Technical Report, 13 73-80, 2006