Skip to content

Navigation Menu

Sign in
Appearance settings

Search code, repositories, users, issues, pull requests...

Provide feedback

We read every piece of feedback, and take your input very seriously.

Saved searches

Use saved searches to filter your results more quickly

Sign up
Appearance settings

Include job status report when failure and no exit code found #5514

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Draft
jorgee wants to merge 1 commit into master
base: master
Choose a base branch
Loading
from 5298-slurm-jobs-being-set-as-running-when-the-actual-state-of-the-job-is-failed

Conversation

Copy link
Contributor

@jorgee jorgee commented Nov 15, 2024

When a job fail and no exit code is found. It prints a dump of the queue however no details of the failed jobs are shown specially in Slurm, where the job is not shown in the queue dump. This dump is replaced by a job status report provided by a call to te queue system

Copy link

netlify bot commented Nov 15, 2024
edited
Loading

Deploy Preview for nextflow-docs-staging ready!

Name Link
🔨 Latest commit 7d7b3c9
🔍 Latest deploy log https://app.netlify.com/sites/nextflow-docs-staging/deploys/67373d753e46c90008582e38
😎 Deploy Preview https://deploy-preview-5514--nextflow-docs-staging.netlify.app
📱 Preview on mobile
Toggle QR Code...

QR Code

Use your smartphone camera to open QR code link.

To edit notification comments on pull requests, go to your Netlify site configuration.

Signed-off-by: jorgee <jorge.ejarque@seqera.io>
@jorgee jorgee force-pushed the 5298-slurm-jobs-being-set-as-running-when-the-actual-state-of-the-job-is-failed branch from 5ff2ae2 to 7d7b3c9 Compare November 15, 2024 12:24
@pditommaso pditommaso force-pushed the master branch 2 times, most recently from 5a93547 to 27345a6 Compare February 10, 2025 21:46
@pditommaso pditommaso force-pushed the master branch 3 times, most recently from b4b321e to 069653d Compare June 4, 2025 18:54
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Reviewers

No reviews

Assignees

No one assigned

Labels

None yet

Projects

None yet

Milestone

No milestone

Development

Successfully merging this pull request may close these issues.

SLURM jobs being set as RUNNING when the actual state of the job is failed

1 participant

AltStyle によって変換されたページ (->オリジナル) /