| Strain number | NIES-293 | |||
|---|---|---|---|---|
| Phylum | Heterokontophyta | |||
| Class | Raphidophyceae | |||
| Scientific name | Heterosigma akashiwo (Hada) Hada ex Y.Hara & Chihara | |||
| Synonym | Entomosigma akashiwo Y.Hada; Chattonella akashiwo (Y.Hada) Loeblich III 1979; Olisthodiscus carterae Hulburt 1965; Heterosigma inlandica Hada 1968; Chattonella inlandica (Y.Hada) Loeblich III & Fine 1977; Heterosigma carterae (Hulbert) F.J.R.Taylor 1992 | |||
| Former name | ||||
| Common name | ||||
| Locality (Date of collection) | Onagawa Bay, Miyagi, Japan (1984年08月28日) | |||
| Latitude / Longitude | 38.438721 / 141.457214 | |||
| Habitat (Isolation source) | Marine (Seawater) | |||
| History | < Suda, Shoichiro | |||
| Isolator (Date of isolation) | Suda, Shoichiro (1984年09月01日) | |||
| Identified by | Suda, Shoichiro | |||
| State of strain | Subculture; Unialgal; Clonal; Axenic[2018 Feb] | |||
|
Culture condition (Preculture condition) |
Medium:
f/2
Temperature: 20 C Light intensity: 31 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 20 D |
|||
| Gene information | Plastid genome ( EU168190 ) , 18S-ITS1-5.8S-ITS2-28S ( DQ470658 ) , CO1 ( AB334512 ) , rbcL ( AB334439 ) | |||
| Cell size (min - max) | ||||
| Organization | Unicellular; Flagellate | |||
| Characteristics | Red tide ; Genome decoded strain (Cattolico, R. A. et al. 2008) | |||
| Other strain no. | Other strain no. : 8280G21-1 | |||
| Remarks | Fragile species to transportation stresses; Read and agree "How to order 4.1"; Axenic | |||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-9 |
Heterosigma akashiwo | Marine (Sediment) | Red tide | |
|
NIES-10 |
Heterosigma akashiwo | Marine (Sediment) | Red tide | |
|
NIES-5 |
Heterosigma akashiwo | Marine | Red tide | |
|
NIES-6 |
Heterosigma akashiwo | Marine | Red tide | |
|
NIES-2857 |
Heterosigma akashiwo | Marine (Seawater) | Red tide | |
|
Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-146 |
Heterosigma akashiwo | Marine | Red tide | |
|
Related strain information
(Used in same reference)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-1391 |
Chrysochromulina sp. | Marine (Seawater) | ||
|
NIES-2148 |
Vischeria stellata | Terrestrial (Soil) | ||
|
NIES-409 |
Achnanthidium minutissimum | Pennate diatom | Freshwater (River water) | |
|
NIES-85 |
Chattonella marina | Marine | Red tide | |
|
NIES-2729 |
Nitzschia palea | Pennate diatom | Freshwater (Stone) | Test strain for AGP etc. (Ishihara, S. et al. 2006) ; Genome decoded strain (Kamikawa et al. 2018) |
| Reference |
|---|
|
Connell, L. & Cattolico, R. A.
1996
Fragile algae: axenic culture of field-collected samples of Heterosigma carterae.
Mar. Biol.,
125,
421-426.
Strain(s): 293 DOI: 10.1007/BF00346322 Takeda, F., Sakamaki, T., Xu, K., Chiba, N., Nishimura, O., Sudo, R. 2003 Effect of potential allelochemicals extracted from Sargassum horneri on the growth of red tide microalgae. J. Environ. Syst. and Eng., JSCE, VII-29, 25-32. Keywords: Sargassum horneri; red tide microalgae; growth inhibition; allelochemicals Strain(s): 1, 16, 293 DOI: 10.2208/jscej.2003.748_25 Ki, J.-S. & Han, M.-S. 2007 Nuclear rDNA and chloroplast rbcL, rbcS and IGS sequence data, and their implications from the Japanese, Korean, and North American harmful algae, Heterosigma akashiwo (Raphidophyceae). Environ. Res., 103, 299-304. Keywords: Heterosigma akashiwo; blooms; nuclear rDNA; rbcS; IGS Strain(s): 293 DOI: 10.1016/j.envres.2006年08月01日4 Cattolico, R. A., Jacobs, M. A., Zhou, Y., Chang, J., Duplessis, M., Lybrand, T., McKay, J., Ong, H. C., Sims, E., Rocap, G. 2008 Chloroplast genome sequencing analysis of Heterosigma akashiwo CCMP452 (West Atlantic) and NIES293 (West Pacific) strains. BMC Genomics, 9, 211-230. Strain(s): 293 PubMed: 18462506 DOI: 10.1186/1471-2164年9月21日1 Demura, M., Noël, M.-H., Kasai, F., Watanabe, M. M., Kawachi, M. 2009 Taxonomic revision of Chattonella antiqua, C. marina and C. ovata (Raphidophyceae) based on their morphological characteristics and genetic diversity. Phycologia, 48, 518-535. Keywords: Chattonella antiqua; Chattonella marina; Chattonella ovata; COI; COX1; Genetic diversity; ITS; Microsatellite; Morphology; Phylogeny; Population; Raphidophyceae; rbcL; Speciation; Taxonomy Strain(s): 1, 2, 3, 5, 6, 9, 10, 14, 83, 84, 85, 113, 114, 116, 118, 146, 161, 293, 557, 561, 603, 671, 716, 849, 1974, 1975, 1976, 1977, 1978, 1980, 1981, 1986, 2383, 2391, 2405, 2406 DOI: 10.2216/08-98.1 Yang, EC., Boo, GH., Kim, HJ., Cho, SM., Boo, SM., Andersen, R. A., Yoon, HS. 2012 Supermatrix data highlight the phylogenetic relationships of photosynthetic Stramenopiles. Protist, 163, 217-231. Keywords: Heterokont algae; molecular phylogenetic analysis; multigene phylogeny; reduced flagellar clade; stramenochromes Strain(s): 293, 622, 716, 1863, 1864 PubMed: 22001261 DOI: 10.1016/j.protis.201108001 Park, B. S., Baek, S. H., Ki, J.-S., Cattolico, R. A., Han, M.-S. 2012 Assessment of EvaGreen-based quantitative real-time PCR assay for enumeration of the microalgae Heterosigma and Chattonella (Raphidophyceae). J. Appl. Phycol., 24, 1555-1567. Keywords: Raphidophyceae; Quantitative real-time PCR; EvaGreen; Field application Strain(s): 293 DOI: 10.1007/s10811-012-9816-2 Hosoi-Tanabe, S. & Sako, Y. 2005 Species-specific detection and quantification of toxic marine Dinoflagellates Alexandrium tamarense and A. catenella by reai-time PCR assay. Mar. Biotechnol., 7, 506-514. Keywords: toxic dinoflagellate; — Alexandrium; paralytic shellfish poisoning (PSP); real-time PCR; species-specific identification; quantification Strain(s): 1, 7, 12, 293, 331, 559, 603, 670 PubMed: 16007374 DOI: 10.1007/s10126-004-4128-4 Saijo, H., Tsuruta, K., Kusumoto, N., Ashitani, T., Takahashi, K. 2013 Growth inhibition activities of Sugi bark components against Heterosigma akashiwo. J. Wood Sci., 59, 238-242. Keywords: Sugi bark; Extract; Inhibition activity; Red tide plankton; Heterosigma akashiwo Strain(s): 293 DOI: 10.1007/s10086-013-1328-4 Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29. Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 345, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691 Hunsperger, H. M., Randhawa, T., Cattolico, R. A. 2015 Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae. BMC Evol. Biol., 15, 16 (article ID). Keywords: Chlorophyll synthesis; Horizontal gene transfer; Endosymbiotic gene transfer; Gene duplication; Algae; Protochlorophyllide Strain(s): 293, 360, 484, 1363, 2140 PubMed: 25887237 DOI: 10.1186/s12862-015-0286-4 Sako, Y. 2019 Ecophysiological studies of marine microorganisms by genome information. Nippon Suisan Gakkaishi, 85, 281-290 (in Japanese). Strain(s): 1, 7, 12, 293, 559, 603, 670 DOI: 10.2331/suisan.WA2633 Kim, J.-H., Park, B. S., Kim, J. H. 2023 Comprehensive understanding of the life history of harmful raphidophyte Heterosigma akashiwo: Integrating in situ and in vitro observations. Harmful Algae, 129, 102521 (article ID). Keywords: Heterosigma akashiwo; Harmful alga; Raphidophyceae; Life history; Life cycle; Sexual reproduction; Hologamete; Homothallism; Zygote (large cell); Multiple cells; Cell cluster; Cyst cluster Strain(s): 5, 293 PubMed: 37951620 DOI: 10.1016/j.hal.2023.102521 Kim, J.-H., Kim, J. H., Kim, S.-H., Kang, Y.-H., Lee, J., Joo, J.-H., Han, M.-S., Park. B. S. 2024 The impact of sexual reproduction-induced vertical migration on the complexity of harmful algal blooms in Heterosigma akashiwo. Environ. Res., 258, 119437 (article ID). Keywords: Harmful algal bloom; Population dynamics; Phytoplankton behaviour Strain(s): 6, 293 PubMed: 38897436 DOI: 10.1016/j.envres.2024.119437 Takebe, H., Tominaga, K., Isozaki, T., Watanabe, T., Yamamoto, K., Kamikawa, R., Yoshida, T. 2024 Taxonomic difference in marine bloom-forming phytoplanktonic species affects the dynamics of both bloom-responding prokaryotes and prokaryotic viruses. mSystems, 9, e00949-23 (article ID). Keywords: phytoplankton bloom; prokaryotes; prokaryotic viruses; microcosm; Heterosigma akashiwo; Chaetoceros sp. Strain(s): 293, 3717 PubMed: 38441030 DOI: 10.1128/msystems.00949-23 |
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