Pull requests: nf-core/rnaseq

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Important! Template update for nf-core/tools v3.4.1

#1614 opened Oct 16, 2025 by nf-core-bot

usage - fix broken link and add latest kit version for Takara UMI prep

#1613 opened Oct 13, 2025 by pontushojer

11 tasks

Qc optimization

#1601 opened Aug 22, 2025 by edmundmiller

11 tasks

@edmundmiller

Dupradar fusion

#1599 opened Aug 20, 2025 by edmundmiller • Draft

11 tasks

@edmundmiller

Update multiqc

#1586 opened Jul 23, 2025 by pinin4fjords

11 tasks

Correct typos in rnaseq DE analysis docs

#1569 opened Jun 10, 2025 by johnvusich

2 tasks done

Update to Nextflow 25.04

#1566 opened Jun 9, 2025 by bentsherman • Draft

ARM Megatests

#1529 opened Mar 26, 2025 by edmundmiller

@edmundmiller

Container configs

#1515 opened Mar 17, 2025 by edmundmiller

@edmundmiller

Try matthias' fix to download

#1439 opened Oct 23, 2024 by pinin4fjords • Draft

11 tasks

allow integer sample names

#1421 opened Oct 18, 2024 by idot

1 task

Update nextflow_schema.json

#1397 opened Oct 2, 2024 by rraadd88

1 of 11 tasks

Copy optimized resources from Tower

#1209 opened Feb 6, 2024 by edmundmiller • Draft

@edmundmiller

Add NGSCheckMate Ready for review

#993 opened Mar 31, 2023 by SPPearce

6 of 9 tasks

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Pull requests: nf-core/rnaseq

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Pull requests list