Jump to content
Wikipedia The Free Encyclopedia

HOXB9

From Wikipedia, the free encyclopedia
Protein-coding gene in humans
HOXB9
Identifiers
Aliases HOXB9 , HOX-2.5, HOX2, HOX2E, homeobox B9
External IDsOMIM: 142964; MGI: 96190; HomoloGene: 7367; GeneCards: HOXB9; OMA:HOXB9 - orthologs
Gene location (Human)
Chromosome 17 (human)
Chr. Chromosome 17 (human) [1]
Band 17q21.32Start48,621,156 bp [1]
End48,626,358 bp [1]
Gene location (Mouse)
Chromosome 11 (mouse)
Chr. Chromosome 11 (mouse)[2]
Band 11 D|11 59.81 cMStart96,162,283 bp [2]
End96,167,421 bp [2]
RNA expression pattern
Bgee
Human Mouse (ortholog)
  • mucosa of transverse colon

  • corpus epididymis

  • rectum

  • buccal mucosa cell

  • mucosa of sigmoid colon

  • caput epididymis

  • gonad

  • testicle

  • mucosa of ileum

  • human kidney
  • tail of embryo

  • lumbar subsegment of spinal cord

  • somite

  • adrenal gland

  • genital tubercle

  • urethra

  • male urethra

  • right kidney

  • neural tube

  • seminal vesicula
More reference expression data
BioGPS
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3219

15417

Ensembl

ENSG00000170689

ENSMUSG00000020875

UniProt

P17482

P20615

RefSeq (mRNA)

NM_024017

NM_008270

RefSeq (protein)

NP_076922

NP_032296

Location (UCSC)Chr 17: 48.62 – 48.63 Mb Chr 11: 96.16 – 96.17 Mb
PubMed search[3] [4]
Wikidata

Homeobox protein Hox-B9 is a protein that in humans is encoded by the HOXB9 gene.[5] [6] [7]

Function

[edit ]

This gene is a member of the Abd-B homeobox family and encodes a protein with a homeobox DNA-binding domain. It is included in a cluster of homeobox B genes located on chromosome 17. The encoded nuclear protein functions as a sequence-specific transcription factor that is involved in cell proliferation and differentiation. Increased expression of this gene is associated with some cases of leukemia, prostate cancer and lung cancer.[7]

Interactions

[edit ]

HOXB9 has been shown to interact with BTG2 [8] and BTG1.[8]

See also

[edit ]

References

[edit ]
  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000170689Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000020875Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ McAlpine PJ, Shows TB (August 1990). "Nomenclature for human homeobox genes". Genomics. 7 (3): 460. doi:10.1016/0888-7543(90)90186-X. PMID 1973146.
  6. ^ Scott MP (December 1992). "Vertebrate homeobox gene nomenclature". Cell. 71 (4): 551–3. doi:10.1016/0092-8674(92)90588-4. PMID 1358459. S2CID 13370372.
  7. ^ a b "Entrez Gene: HOXB9 homeobox B9".
  8. ^ a b Prévôt D, Voeltzel T, Birot AM, Morel AP, Rostan MC, Magaud JP, Corbo L (January 2000). "The leukemia-associated protein Btg1 and the p53-regulated protein Btg2 interact with the homeoprotein Hoxb9 and enhance its transcriptional activation". J. Biol. Chem. 275 (1): 147–53. doi:10.1074/jbc.275.1.147 . PMID 10617598.

Further reading

[edit ]
[edit ]
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2 /EREBP -related factors
(0.6) Miscellaneous

This article incorporates text from the United States National Library of Medicine, which is in the public domain.


Stub icon

This article on a gene on human chromosome 17 is a stub. You can help Wikipedia by expanding it.

AltStyle によって変換されたページ (->オリジナル) /