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Status Public on Apr 15, 2014
Title Illumina NextSeq 500 (Homo sapiens)
Technology type high-throughput sequencing
Distribution virtual
Organism Homo sapiens
Submission date Apr 15, 2014
Last update date Mar 26, 2019
Contact name GEO
Country USA
Samples (367690)
GSM1369394, GSM1369395, GSM1406295, GSM1406296, GSM1406297, GSM1406298
GSM1406299, GSM1406300, GSM1406301, GSM1406302, GSM1406303, GSM1406304, GSM1406305, GSM1418975, GSM1418976, GSM1505438, GSM1505439, GSM1505440, GSM1505441, GSM1505442, GSM1505443, GSM1526934, GSM1526935, GSM1536041, GSM1536042, GSM1536043, GSM1536044, GSM1536045, GSM1536046, GSM1545037, GSM1545038, GSM1553135, GSM1553136, GSM1553137, GSM1553138, GSM1553140, GSM1553141, GSM1553142, GSM1553143, GSM1579214, GSM1587904, GSM1587905, GSM1587906, GSM1587907, GSM1587908, GSM1587909, GSM1587912, GSM1587913, GSM1590769, GSM1590770, GSM1590771, GSM1590772, GSM1590773, GSM1590774, GSM1590775, GSM1590776, GSM1590777, GSM1590778, GSM1590779, GSM1590780, GSM1590781, GSM1590782, GSM1590783, GSM1590784, GSM1590785, GSM1590786, GSM1590787, GSM1590788, GSM1590789, GSM1590790, GSM1590791, GSM1590792, GSM1590793, GSM1590794, GSM1590795, GSM1590796, GSM1590797, GSM1590798, GSM1590799, GSM1590800, GSM1590801, GSM1590802, GSM1590803, GSM1590804, GSM1590805, GSM1590806, GSM1590807, GSM1590808, GSM1590809, GSM1590810, GSM1590811, GSM1590812, GSM1590813, GSM1590814, GSM1590815, GSM1590816, GSM1590817, GSM1590818, GSM1590819, GSM1590820, GSM1590821, GSM1590822, GSM1590823, GSM1590824, GSM1590825, GSM1590826, GSM1590827, GSM1590828, GSM1590829, GSM1590830, GSM1590831, GSM1590832, GSM1590833, GSM1590834, GSM1590835, GSM1590836, GSM1590837, GSM1590838, GSM1590839, GSM1590840, GSM1590841, GSM1590842, GSM1590843, GSM1590844, GSM1590845, GSM1590846, GSM1590847, GSM1590848, GSM1590849, GSM1590850, GSM1590851, GSM1590852, GSM1590853, GSM1590854, GSM1590855, GSM1590856, GSM1590857, GSM1590858, GSM1590859, GSM1590860, GSM1590861, GSM1590862, GSM1590863, GSM1590864, GSM1590865, GSM1590866, GSM1590867, GSM1590868, GSM1590869, GSM1590870, GSM1590871, GSM1590872, GSM1590873, GSM1590874, GSM1590875, GSM1590876, GSM1596255, GSM1596256, GSM1596257, GSM1596258, GSM1596259, GSM1596260, GSM1596261, GSM1596262, GSM1596263, GSM1596264, GSM1596265, GSM1596266, GSM1596267, GSM1596268, GSM1596269, GSM1596270, GSM1596271, GSM1596272, GSM1596273, GSM1596274, GSM1596275, GSM1596276, GSM1596277, GSM1596278, GSM1596279, GSM1596280, GSM1596281, GSM1596282, GSM1596283, GSM1596284, GSM1596285, GSM1596286, GSM1596287, GSM1596288, GSM1596289, GSM1596290, GSM1596291, GSM1596292, GSM1596293, GSM1596294, GSM1596295, GSM1596296, GSM1596297, GSM1596298, GSM1596299, GSM1596300, GSM1596301, GSM1596302, GSM1596303, GSM1596304, GSM1596305, GSM1596306, GSM1596307, GSM1596308, GSM1596309, GSM1596310, GSM1596311, GSM1596312, GSM1596313, GSM1596314, GSM1596315, GSM1596316, GSM1596317, GSM1596318, GSM1596319, GSM1596320, GSM1596321, GSM1596322, GSM1596323, GSM1596324, GSM1596325, GSM1596326, GSM1596327, GSM1596328, GSM1596329, GSM1596330, GSM1596331, GSM1596332, GSM1596333, GSM1596334, GSM1596335, GSM1596336, GSM1596337, GSM1596338, GSM1596339, GSM1596340, GSM1596341, GSM1596342, GSM1596343, GSM1596344, GSM1596345, GSM1596346, GSM1596347, GSM1596348, GSM1596349, GSM1596350, GSM1596543, GSM1596544, GSM1596545, GSM1596546, GSM1596547, GSM1596548, GSM1596549, GSM1596550, GSM1596551, GSM1596552, GSM1596553, GSM1596554, GSM1596555, GSM1596556, GSM1596557, GSM1596558, GSM1596559, GSM1596560, GSM1596561, GSM1596562, GSM1596563, GSM1596564, GSM1596565, GSM1596566, GSM1596567, GSM1596568, GSM1596569, GSM1596570, GSM1596571, GSM1596572, GSM1596573, GSM1596574, GSM1596575, GSM1596576, GSM1596577, GSM1596578, GSM1596579, GSM1596580, GSM1596581, GSM1596582, GSM1596583, GSM1596584, GSM1596585, GSM1596586, GSM1596587, GSM1596588, GSM1596589, GSM1596590, GSM1596591, GSM1596592, GSM1596593, GSM1596594, GSM1596595, GSM1596596, GSM1596597, GSM1596598, GSM1596599, GSM1596600, GSM1596601, GSM1596602, GSM1596603, GSM1596604, GSM1596605, GSM1596606, GSM1596607, GSM1596608, GSM1596609, GSM1596610, GSM1596611, GSM1596612, GSM1596613, GSM1596614, GSM1596615, GSM1596616, GSM1596617, GSM1596618, GSM1596619, GSM1596620, GSM1596621, GSM1596622, GSM1596623, GSM1596624, GSM1596625, GSM1596626, GSM1596627, GSM1596628, GSM1596629, GSM1596630, GSM1596631, GSM1596632, GSM1596633, GSM1596634, GSM1596635, GSM1596636, GSM1596637, GSM1596638, GSM1596639, GSM1596640, GSM1596641, GSM1596642, GSM1596643, GSM1596644, GSM1596645, GSM1596646, GSM1596647, GSM1596648, GSM1596649, GSM1596650, GSM1596651, GSM1596652, GSM1596653, GSM1596654, GSM1596655, GSM1596656, GSM1596657, GSM1596658, GSM1596659, GSM1596660, GSM1596661, GSM1596662, GSM1596663, GSM1596664, GSM1596665, GSM1596666, GSM1596667, GSM1596668, GSM1596669, GSM1596670, GSM1596671, GSM1596672, GSM1596673, GSM1596674, GSM1596675, GSM1596676, GSM1596677, GSM1596678, GSM1596679, GSM1596680, GSM1596681, GSM1596682, GSM1596683, GSM1596684, GSM1596685, GSM1596686, GSM1596687, GSM1596688, GSM1596689, GSM1596690, GSM1596691, GSM1596692, GSM1596693, GSM1596694, GSM1596695, GSM1596696, GSM1596697, GSM1596698, GSM1596699, GSM1596700, GSM1596701, GSM1596702, GSM1596703, GSM1596704, GSM1596705, GSM1596706, GSM1596707, GSM1596708, GSM1596709, GSM1596710, GSM1596711, GSM1596712, GSM1596713, GSM1596714, GSM1596715, GSM1596716, GSM1596717, GSM1596718, GSM1596719, GSM1596720, GSM1596721, GSM1596722, GSM1596723, GSM1596724, GSM1596725, GSM1596726, GSM1596727, GSM1596728, GSM1596729, GSM1596730, GSM1596731, GSM1596732, GSM1596733, GSM1596734, GSM1596735, GSM1596736, GSM1596737, GSM1596738, GSM1596739, GSM1596740, GSM1596741, GSM1596742, GSM1596743, GSM1596744, GSM1596745, GSM1596746, GSM1596747, GSM1596748, GSM1596749, GSM1596750, GSM1596751, GSM1596752, GSM1596753, GSM1596754, GSM1596755, GSM1596756, GSM1596757, GSM1596758, GSM1596759, GSM1596760, GSM1596761, GSM1596762, GSM1596763, GSM1596764, GSM1596765, GSM1596766, GSM1596767, GSM1596768, GSM1596769, GSM1596770, GSM1596771, GSM1596772, GSM1596773, GSM1596774, GSM1596775, GSM1596776, GSM1596777, GSM1596778, GSM1596779, GSM1596780, GSM1596781, GSM1596782, GSM1596783, GSM1596784, GSM1596785, GSM1596786, GSM1596787, GSM1596788, GSM1596789, GSM1596790...
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Series (13797)
GSE38548 Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer
GSE56288 Androgen receptor programming in human tissue implicates HOXB13 in prostate pathogenesis [ChIP-Seq]
GSE56802 RNA helicase DDX21 coordinates transcription and noncoding RNA processing of the ribosomal pathway
GSE57973 Age-dependent gene expression changes in human islets
GSE58310 Epigenetic programming during monocyte to macrophage differentiation and trained innate immunity
GSE58740 Chromatin dynamics of p53 binding sites in IMR90
GSE60144 Dual RNA-seq of diverse human, mouse and pig cell-types infected with various Salmonella strains
GSE61332 Native Elongating Transcript Sequencing Reveals Human Transcriptional Activity at Nucleotide Resolution
GSE61911 Glucocorticoid receptor and nuclear factor kappa-b affect 3D chromatin organization
GSE62909 SOX15 governs a transcriptional program in human esophageal stratified epithelium and in a subset of esophageal adenocarcinomas
GSE63222 Inhibitors of LSD1 target demethylase-independent activity to induce differentiation in acute myeloid leukemia
GSE63284 Response and resistance to BET bromodomain inhibitors in triple negative breast cancer [Chem-Seq]
GSE63440 Autophagy mediates degradation of nuclear lamina
GSE63581 Response and resistance to BET bromodomain inhibitors in triple negative breast cancer [ChIP-Seq]
GSE63582 Response and resistance to BET bromodomain inhibitors in triple negative breast cancer [RNA-Seq]
GSE63584 Response and resistance to BET bromodomain inhibitors in triple negative breast cancer
GSE64301 SUMOylation regulates the protein network and chromatin accessibility at glucocorticoid receptor-binding sites [sequencing]
GSE64328 Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation
GSE64332 Human DIS3 shapes the RNA polymerase II transcriptome degrading variety of unwanted transcripts.
GSE64373 SUMOylation regulates the protein network and chromatin accessibility at glucocorticoid receptor-binding sites
GSE64744 Small RNA profiling reveals deregulated PTEN/PI3K/Akt pathway in asthmatic bronchial smooth muscle cells
GSE65138 Effect of cortistatin A (CA) on enhancer occupancy in CA-sensitive and -insensitive human cell lines
GSE65161 Mediator kinase inhibition further activates super-enhancer-associated genes in AML
GSE65253 Prospective derivation of a 'Living Organoid Biobank' of colorectal cancer patients
GSE65360 Single-cell chromatin accessibility data using scATAC-seq
GSE65525 Droplet barcoding for single cell transcriptomics applied to embryonic stem cells
GSE65886 H4K12ac is regulated by estrogen receptor-alpha and is associated with BRD4 function and inducible transcription
GSE66053 Single mammalian cells compensate for differences in cellular volume and DNA copy number through independent global transcriptional mechanisms
GSE66216 Nucleosome dynamics in human colorectal cancer specimens reveal activation of a CNOT3-regulated pathway of embryonic stem cell self-renewal
GSE66357 Scalable Microfluidics for Single Cell RNA Printing and Sequencing
GSE66843 A cell-based model unravels drivers for hepatocarcinogenesis and targets for clinical chemoprevention
GSE67758 Dual RNA-seq – High-resolution comparative Dual RNA-seq time-course
GSE67809 Genome-wide chromatin binding of transcription factor E2F1 in castration resistant prostate cancer (CRPC) cells
GSE67835 A survey of human brain transcriptome diversity at the single cell level
GSE67866 RNA sequencing of cells treated with DMSO or Retinoic acid during cardiac differentiation
GSE67978 Epigenomic annotation of gene regulatory alterations during evolution of the primate brain
GSE68045 Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription [FAST-iCLIP]
GSE68053 Nucleotide stress induction of HEXIM1 suppresses melanoma by modulating cancer cell-specific gene transcription
GSE68102 Multiplex Single Cell Profiling of Chromatin Accessibility by Combinatorial Cellular Indexing [RNA-seq]
GSE68103 Multiplex Single Cell Profiling of Chromatin Accessibility by Combinatorial Cellular Indexing
GSE68109 Impact of flanking chromosomal sequences on localization and silencing by the ncRNA XIST
GSE68401 Enhancer activation during EGF response
GSE69110 Distinct regulatory programs for Sox9 in transcriptional regulation of the developing mammalian chondrocyte [RNA-seq]
GSE69111 Distinct regulatory programs for Sox9 in transcriptional regulation of the developing mammalian chondrocyte
GSE69112 Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [ChIP-Seq 3]
GSE69114 Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [RNA-Seq]
GSE69420 Finding missing proteins from epigenetically manipulated human cells
GSE69472 RNA Proximity Ligation to Resolve Intramolecular RNA Structures in situ
GSE69516 EHMT1 and EHMT2 inhibition induce fetal hemoglobin expression [ChIP-seq]
GSE69558 Detection of Enhancer-Associated Rearrangements Reveals Mechanisms of Oncogene Dysregulation in B-cell Lymphoma [ChIP-Seq]
GSE69739 Genome-wide binding profiles of an artificial zinc finger protein with or without a KLF3 functional domain
GSE69749 Sex-specific chromatin accessibility profiling in human PBMCs
GSE69836 Reversal of microRNA-150 silencing disadvantages crizotinib-resistant NPM-ALK-positive cell growth.
GSE69877 MCPyV ST, MAX and the TRRAP complex cooperate to bind to Transcription Start Sites
GSE69878 MCPyV ST activates Max target genes by recruiting TRRAP/EP400 complex
GSE69889 Genome-wide Circadian Control of Transcription at Active Enhancers Regulates Insulin Secretion and Diabetes Risk
GSE69977 Fine-mapping of DNA modifications in the lactase gene region of humans and mice
GSE69979 Epigenetics of lactose intolerance and lactase persistence
GSE70000 Ubiquitin-dependent turnover of MYC promotes loading of the PAF complex on RNA Polymerase II to drive transcriptional elongation (RNA-seq)
GSE70001 Ubiquitin-dependent turnover of MYC promotes loading of the PAF complex on RNA Polymerase II to drive transcriptional elongation (ChIP-seq)
GSE70009 Ubiquitin-dependent turnover of MYC promotes loading of the PAF complex on RNA Polymerase II to drive transcriptional elongation
GSE70078 Androgen receptor programming in human tissue implicates HOXB13 in prostate pathogenesis [RNA-Seq]
GSE70079 Androgen receptor programming in human tissue implicates HOXB13 in prostate pathogenesis
GSE70101 Mini-kidneys from human pluripotent cells model normal human fetal kidney development and response to nephrotoxicity
GSE70408 PAF1, a molecular regulator of promoter-proximal pausing by RNA Polymerase II
GSE70519 DNA Cytosine Hydroxymethylation Levels Are Distinct Among Peripheral Blood Leukocytes
GSE70630 Single cell RNA-seq analysis of oligodendroglioma
GSE70668 Mitotic stress is an integral part of the oncogene-induced senescence program that promotes multinucleation and cell cycle arrest
GSE70694 Cas9 gRNA engineering for selectable genome editing, activation and repression
GSE70920 The chromatin remodeler ATRX binds to atypical chromatin domains at the 3’ exons of ZNF genes to preserve H3K9me3 enrichment
GSE70961 Pancreatic Beta Cell Enhancers Regulate Rhythmic Transcription of Exocyst Triggering and Diabetes
GSE70991 Insulator dysfunction and oncogene activation in IDH mutant gliomas
GSE71422 EHMT1 and EHMT2 inhibition induce fetal hemoglobin expression
GSE71456 Derivation and differentiation of haploid human embryonic stem cells [RNA-Seq 1]
GSE71458 Derivation and differentiation of haploid human embryonic stem cells
GSE71595 RNA-sequencing of cells derived from the site of inflammation of Juvenile Idiopathic Arthritis patients
GSE71596 Epigenetic profiling of Juvenile Idiopathic Arthritits (JIA) patients
GSE71597 Epigenetic profiling and RNA-sequencing of Juvenile Idiopathic Arthritits (JIA) patients
GSE71797 Genome-wide RNA-sequencing (RNA-seq) of benign and malignant prostate cell lines without and with androgen (R1881) stimulation.
GSE72056 Single cell RNA-seq analysis of melanoma
GSE72141 GATA3-mediated chromatin reprogramming in breast cancer cells
GSE72250 Characterization of chromatin accessibility through the DNaseI hypersensitivity assay in breast cancer cells treated with either Dex or E2
GSE72252 DNaseI hypersensitivity assay and ER, GR, and FoxA1 binding patterns in breast cancer cells
GSE72400 naive T cell heterogeneity after neonatal thymectomy
GSE72622 KAP1 Recruitment of the 7SK snRNP to Promoters Enables Transcription Elongation by RNA Polymerase II
GSE72631 Effects on the transcriptome upon deletion of distal elements are not correlated with the size of H3K27Ac peaks in human cells
GSE72816 CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription
GSE73065 High-throughput single-base resolution mapping of 2’-O-Methylated residues
GSE73099 Small RNA and High Molecular Weight RNA Deep Sequencing Analysis of miR-17~92 Mimics Transfected HeLa cells
GSE73206 ATAC-Seq on Cohesin mutant HSPCs
GSE73207 ChIP-Seq on Cohesin mutant TF-1 Cell Line
GSE73319 CCAT1 is a cMYC super-enhancer templated RNA that predicts BET sensitivity in cancer
GSE73342 Next Generation Sequencing of small non-coding RNAs in the tissue of patients with renal cell carcinoma
GSE73398 Fixed tissue ChIP-Seq (FiT-Seq) of archived clinical samples reveals chromatin dynamics and tumor-specific enhancer profiles
GSE73616 An interaction with Ewing's sarcoma breakpoint protein EWS defines the subset of ETS factors rearranged in prostate cancer
GSE73721 RNA-Seq of human astrocytes
GSE73845 Functional characterization of RNA-binding protein IMP2 in primary Glioma cell lines [HTS]
GSE73847 Functional characterization of RNA-binding protein IMP2 in primary Glioma cell lines
GSE73982 A Primate lncRNA Mediates Notch Signaling During Neuronal Development by Sequestering miRNA [SHSY5Y cells]
GSE73999 P120-catenin dependent glioma-cell networks drive growth and diffuse brain infiltration
GSE74072 Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes
GSE74141 NAD+ Analog-sensitive PARPs Reveal a Role for PARP-1 in Transcription Elongation
GSE74142 NAD+ Analog-sensitive PARPs Reveal a Role for PARP-1 in Transcription Elongation
GSE74180 Repression of stress-induced LINE-1 expression protects cancer cell populations from lethal drug-exposures
GSE74198 Next generation sequencing identifies circulating microRNAs in cardiac arrest patients
GSE74207 A Primate lncRNA Mediates Notch Signaling During Neuronal Development by Sequestering miRNA [single cell sequencing analysis]
GSE74210 A Primate lncRNA Mediates Notch Signaling During Neuronal Development by Sequestering miRNA
GSE74246 Unstranded RNA sequencing data
GSE74279 Positional proteomics reveals differences in N-terminal proteoform stability
GSE74310 Single-cell chromatin accessibility data using scATAC-seq
GSE74311 H3K27ac ChIP-Seq in LOUCY
GSE74312 Long noncoding RNA signatures define oncogenic subtypes in T-cell acute lymphoblastic leukemia
GSE74353 RNA duplex map in living cells reveals higher order transcriptome structure
GSE74359 A multiplexed system for quantitative comparisons of chromatin landscapes
GSE74450 Direct Isolation and Characterization of Human Nephron Progenitors.
GSE74457 A Dual Molecular Analog Tuner for Dissecting Mammalian Protein Function
GSE74484 Gene expression profiling in metabolically heterogeneous human lung tumors
GSE74520 Epigenetic Profile in Transcription elongation factors are in vivo-specific cancer dependencies in glioma
GSE74529 Transcription elongation factors are in vivo-specific cancer dependencies in glioma
GSE74557 Adaptive chromatin remodeling in glioblastoma stem cell plasticity and drug tolerance
GSE74812 MLL-rearranged acute lymphoblastic leukemias upregulate BCL-2 through H3K79 methylation and are highly sensitive to the BCL-2 specific antagonist ABT-199
GSE74912 ATAC-seq data
GSE74981 Next generation sequencing to elucidate the novel function of RORC (RORgamma) in breast cancer
GSE75059 Transcriptional profile changes by Prox1 expression in thyroid cancer cells
GSE75189 High-Resolution CRISPR Screens Reveal Fitness Genes and Genotype-Specific Cancer Liabilities
GSE75231 Genome-Wide Chromatin Landscape Transitions Identify Novel Pathways in Early Commitment to Osteoblast Differentiation (Dnase-Seq)
GSE75232 Genome-Wide Chromatin Landscape Transitions Identify Novel Pathways in Early Commitment to Osteoblast Differentiation
GSE75247 Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation
GSE75384 Lineage-specific and single cell chromatin accessibility charts human hematopoiesis and leukemia evolution
GSE75411 Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation
GSE75432 Muscle transcriptome analysis following Total Knee Arthroplasty with Tourniquet
GSE75439 Identification of RNAs bound to endogenous PUM2 in HCT116 cells
GSE75452 Pan-cancer transcriptomic analysis associates long non-coding RNAs with key mutational driver events
GSE75515 Gene expression analysis of human haploid cells (HAP1) depleted of SMARCB1 and SMARCA4
GSE75527 Landscape of human mast cell chromatin: a rich resource for identification of novel mediators and genetic drivers of allergic and inflammatory diseases
GSE76006 ATAC-Se1 to investigate the spatial choreography of the accessible genome
GSE76116 ChIP-seq analysis of MBD3 in human breast cancer cells
GSE76125 Effect of mitochondria deficiency on senescence-associated gene expression
GSE76147 A druggable TCF4- and BRD4-dependent transcriptional network sustains malignancy in blastic plasmacytoid dendritic cell neoplasm (ChIP-Seq)
GSE76224 Single-cell epigenomic variability reveals functional cancer heterogeneity
GSE76268 Integration of ATAC-seq and RNA-seq Identifies Human Alpha Cell and Beta Cell Signature Genes
GSE76336 Novel contribution of acetylated histone variant H2A.Z in activation of neo-enhancers in prostate cancer [ChIP-seq]
GSE76337 Novel contribution of acetylated histone variant H2A.Z in activation of neo-enhancers in prostate cancer
GSE76465 An oncogenic MYB feedback loop drives alternate cell fates in adenoid cystic carcinoma
GSE76663 miRNAs affected by antagomiR-17 treatment
GSE76688 G-quadruplex structures mark human regulatory chromatin
GSE76763 UMI-4C for quantitative and targeted chromosomal contact profiling
GSE76937 RUNX2 and CBFB genome-wide binding in osteosarcoma SAOS2 cells
GSE76955 Genome-wide uniformity of human "open" pre-initiation complexes
GSE77031 Double-stranded RNA sequencing of HCT116 cells with 5-Aza-CdR and combination treatment compared to untreated cells
GSE77034 Total RNA sequencing of HCT116 cells with vitamin C, 5-Aza-CdR and combination treatment compared to untreated cells II
GSE77088 Time course RNA-Seq of Innate Lymphoid Cells in Early Acute HIV Infection
GSE77129 Wiskott-Aldrich Syndrome-causative mutations disrupt alternative splicing and promote gene networks predisposed to hematologic malignancies
GSE77282 rG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome
GSE77292 Ribosomal footprinting of CN34-Parental and CN34-LM1a
GSE77315 Ribosomal footprinting of MDA-Parental and MDA-LM2
GSE77317 Ribosomal footprinting of MDA_Ctrl and MDA_Arg overexpression cell lines
GSE77328 OmoMYC blunts promoter invasion by oncogenic MYC to inhibit gene expression characteristic of MYC-dependent tumors
GSE77347 Ribosomal footprinting of MDA_Ctrl and MDA_Glu overexpression cell lines
GSE77352 A RUNX2-mediated Epigenetic Regulation of the Survival of p53 Defective Cancer Cells
GSE77356 Different promoter affinities account for specificity in MYC-dependent gene regulation
GSE77381 Arnica montana stimulates extracellular matrix gene expression in human macrophages differentiated to wound-healing phenotype. Tested on 5 concentrations.
GSE77382 Arnica montana stimulates extracellular matrix gene expression in human macrophages differentiated to wound-healing phenotype.
GSE77401 Modulated expression of specific tRNA species drives cancer progression
GSE77484 miR-seq to define mature miRNAs in human HEK293T cells that are targeted for degradation by the endonuclease Tudor-SN (i.e. by TumiD).
GSE77526 MNase-seq analysis in human breast cancer cells
GSE77553 Capturing pairwise and multi-way chromosomal conformations using C-walks
GSE77568 Inhibition of BET protein BRD4 activity synergizes with cisplatin in ovarian cancer by targeting ALDH activity through an ALDH1A1 super-enhancer and the associated enhancer RNA
GSE77841 mRNA-seq from Nutlin-3a, doxorubicin, and DMSO treated HCT116 p21-/- cells
GSE77901 RNA-Seq of SLNCR1 over-expression in the melanoma cell line A375
GSE77902 RNA-Seq of siRNA-mediated knockdown of the lncRNA SLNCR1 in WM1976 melanoma cells
GSE77903 RNA-Seq of over-expression and knockdown of the lncRNA SLNCR1 in melanoma cells
GSE78011 RNA-Seq Analysis of Anacardic Acid Treated MCF7 and MDA-MB-231 Breast Cancer Cell Lines
GSE78138 MLL1 is essential for the senescence-associated secretory phenotype [RNA-Seq]
GSE78141 MLL1 is essential for the senescence-associated secretory phenotype [ChIP-Seq]
GSE78142 MLL1 is essential for the senescence-associated secretory phenotype
GSE78172 DSBCapture: in situ capture and direct sequencing of dsDNA breaks
GSE78178 Effect of BB608 on Gene Expression in HNSCC Cell Line
GSE78206 H3K4me3 ChIP in multiple myeloma MM1S cells in the presence and absence of KDM5-C70
GSE78212 Effect of BB608 on STAT3 DNA Binding in HNSCC Cell Line
GSE78262 ChIP-seq. analysis of pan-histone 3 acetylation in Romidepsin treated TCam-2
GSE78711 Zika Virus Targets Human Cortical Neural Precursors and Attenuates Their Growth
GSE78725 Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation (RNA-seq)
GSE78801 Heterotypic nucleosomes and PRC2 drive DIPG oncogenesis
GSE78832 Ultraefficient irCLIP platform for characterization of protein-RNA interactions
GSE78913 Tracing Enhancer Networks using Epigenetic Traits (TENET)
GSE78957 Association with Aurora-A controls N-MYC-dependent promoter escape and pause release of RNA polymerase II during the cell cycle
GSE78968 Effective Detection of Variation in Single Cell Transcriptome using MATQ-seq
GSE79019 Dynamic gene regulatory networks of human myeloid differentiation [ATAC-seq]
GSE79044 Dynamic gene regulatory networks of human myeloid differentiation [RNA-seq]
GSE79046 Dynamic gene regulatory networks of human myeloid differentiation
GSE79128 AR and ERG ChIP-seq in presence or absence of PRMT5
GSE79133 HEK293 cells 100 cell RNAseq profiling on Illumina NextSeq 500
GSE79134 Optimized Approaches for Generation of Integration-free iPSCs from Human Urine-derived Cells with Small Molecules and Autologous Feeder
GSE79136 A cost effective single cell RNA sequencing approach for the Fluidigm C1
GSE79253 BET bromodomain proteins function as master transcription elongation factors independent of CDK9 recruitment [RNA-seq]
GSE79271 BET bromodomain proteins function as master transcription elongation factors independent of CDK9 recruitment [NET-seq]
GSE79280 Parental allele specific single-cell transcriptome dynamics reveal incomplete epigenetic reprogramming in human female germ cells
GSE79288 BET bromodomain proteins function as master transcription elongation factors independent of CDK9 recruitment [ChIP-seq]
GSE79290 BET bromodomain proteins function as master transcription elongation factors independent of CDK9 recruitment
GSE79469 Age-dependent pancreatic gene regulation reveals mechanisms governing human β-cell function
GSE79544 Idiopathic pulmonary fibrosis bronchoalveolar lavage cells RNA-seq indicates macrophage expression of pro-inflammatory M1/M2 activation concomitant with radical species metabolism inhibition
GSE79658 ChIP-sequencing of prostate cancer cells
GSE79734 Epigenetic Profile in RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation
GSE79736 RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation
GSE79787 small RNA sequencing for identifying hypoxic responsive miRNAs
GSE79789 miR25/93 mediates the hypoxia-induced immunosuppression by repression of cGAS
GSE79804 A conserved abundant cytoplasmic long noncoding RNA modulates repression of mRNAs by Pumilio proteins in human cells
GSE79833 CRIG identifies a novel population of highly phagocytic peritoneal macrophages associated with disease severity in patients with cirrhosis and ascites
GSE79834 ZMYND8 co-localizes with NuRD on target genes and regulates recruitment of GATAD2A/NuRD to sites of DNA damage [ChIP-seq]
GSE79835 ZMYND8 co-localizes with NuRD on target genes and regulates recruitment of GATAD2A/NuRD to sites of DNA damage [RNA-seq]
GSE79836 ZMYND8 co-localizes with NuRD on target genes and regulates recruitment of GATAD2A/NuRD to sites of DNA damage
GSE79870 H3K27ac ChIP-Seq in REH and 697
GSE79872 RNA-sequencing of B-ALL cell lines, REH treated with LNA GapmeRs against four lncRNAs
GSE79873 Unique long non-coding RNA expression signature in ETV6/RUNX1-driven B-cell precursor acute lymphoblastic leukemia
GSE79879 Transcriptome analysis of NKG2CBright compared to NKG2CNeg from multigravida decidua samples
GSE79920 Single-nucleus RNA-seq on undifferentiated human KD3 myoblasts and differentiated myotubes and mononucleated cells.
GSE79921 ATAC-Seq to investigate the spatial choreography of the accessible genome
GSE79989 Massively-parallel functional characterization of MAPK1 missense mutants
GSE80150 Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ChIP_RX]
GSE80151 Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ChIP-seq]
GSE80152 Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ATAC-seq]
GSE80153 Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [RNA-seq]
GSE80154 Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma
GSE80167 Global Mapping of Human RNA-RNA Interactions
GSE80212 A Reproducibility-Based Computational Framework Identifies An Inducible, Enhanced Antiviral Dendritic Cell State In HIV-1 Elite Controllers (scRNA-Seq)
GSE80238 Gemone-wide changes of epigenetic mark H3K27 trimethylation (H3K27me3) and AR in prostate cancer cells upon the treatment of EZH2 inhibitors [ChIP-seq]
GSE80239 EZH2 inhibitor-mediated transcriptional profiling in prostate cancer cells [RNA-seq]
GSE80240 Distinct changes in transcriptional profiles and epigenetic patterns mediated by EZH2 inhibitors in sensitive and insensitive prostate cancer cells
GSE80256 Grainyhead-like 2 is essential for androgen receptor expression and activity in prostate cancer (ChIP-seq)
GSE80264 Transcriptome analysis of H9 hESC derived cerebral organoids
GSE80306 Aging-related virtually naïve memory T (TVNM) cells: a new stage in T cell response to persistent infections in humans
GSE80333 Spatial proximity to fibroblasts impacts molecular features and therapeutic sensitivity of breast cancer cells influencing clinical outcomes
GSE80372 A splicing switch of TEAD4 regulates Hippo-YAP signaling pathway to inhibit tumor proliferation
GSE80386 Integrator complex subunit 12 is a key regulator of human protein synthesis pathways
GSE80434 Molecular Signatures Associated with ZIKV Exposure in Human Cortical Neural Progenitors
GSE80450 Grainyhead-like 2 is essential for androgen receptor expression and activity in prostate cancer (RNA-seq)
GSE80452 Grainyhead-like 2 is essential for androgen receptor expression and activity in prostate cancer
GSE80591 Messenger RNA expression after MK2206/DMSO treatment of T47D cells
GSE80592 Genome-wide H3K4me3 after MK2206/DMSO treatment of T47D cells
GSE80593 Genome-wide KDM5A occupancy after MK2206/DMSO treatment of T47D cells
GSE80594 PI3K/AKT signaling regulates H3K4 methylation in breast cancer
GSE80619 T47D xenografts treated with various combinations of ER- and PR-targeting therapies
GSE80620 Progesterone Receptor Isoforms, Agonists and Antagonists Differentially Reprogram Estrogen Signaling.
GSE80661 Non-overlapping control of transcriptome by Promoter and Super-Enhancer-Associated Dependencies
GSE80705 Removable insulator facilitates higher-order chromatin remodeling and selective gene expression in the HOXA locus via the retinoic acid signaling [ChIP-seq]
GSE80706 Removable insulator facilitates higher-order chromatin remodeling and selective gene expression in the HOXA locus via the retinoic acid signaling
GSE80753 LSD1 mediates MYCN control of epithelial-mesenchymal transition through silencing of metastatic suppressor NDRG1 gene
GSE80774 ENL Links Histone Acetylation to Oncogenic Gene Expression in AML
GSE80779 ENL Links Histone Acetylation to Oncogenic Gene Expression in AML
GSE81009 Global binding of isoforms of Wilms' Tumor gene 1 and H3K4me3 in K562 cells
GSE81076 A single-cell transcriptome atlas of the human pancreas
GSE81144 Gene expression in BRAFV600E thyrocyte
GSE81314 Shotgun sequencing of 5-hydroxymethylcysotine circulating cell-free DNA from the blood distinguishes solid tumor tissues of origin
GSE81345 Sensing self and nonself circular RNAs
GSE81402 Analysis of chromosomal aberrations and recombination by allelic bias in RNA-Seq
GSE81412 Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Bulk RNA-Seq validation
GSE81482 ChIP-seq for identifying molecules associated with epithelial-mesenchymal transition and acquired resistance to ALK inhibitors
GSE81483 Methylation profiling study by MBD-seq for identifying genes associated with epithelial-mesenchymal transition and acquired resistance to ALK inhibitors
GSE81484 Gene expression profiling study by RNA-seq for identifying genes associated with epithelial-mesenchymal transition and acquired resistance to ALK inhibitors
GSE81485 An extensive program of periodic alternative splicing linked to cell cycle progression
GSE81486 Expression profiling by small RNA-seq for identifying miRNA associated with epithelial-mesenchymal transition and acquired resistance to ALK inhibitors
GSE81487 Epithelial-mesenchymal transition and acquired resistance to ALK inhibitors
GSE81493 An interaction with Ewing's sarcoma breakpoint protein EWS defines the specific oncogenic mechanism of ETS factors rearranged in prostate cancer
GSE81497 Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma [Let7Targets]
GSE81498 Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma [longRNA]
GSE81499 Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma [shortRNA]
GSE81500 Multiple mechanisms disrupt let-7 miRNA biogenesis and function in neuroblastoma
GSE81540 Clinical Value of RNA Sequencing–Based Classifiers for Prediction of the Five Conventional Breast Cancer Biomarkers: A Report From the Population-Based Multicenter Sweden Cancerome Analysis Network—Breast Initiative [superseries]
GSE81547 Single cell transcriptome analysis of human pancreas reveals transcriptional signatures of aging and somatic mutation patterns.
GSE81600 A long noncoding RNA regulates sister chromatid cohesion [ChIP-seq]
GSE81602 A long noncoding RNA regulates sister chromatid cohesion
GSE81620 Next Generation Sequencing Facilitates Quantitative Analysis of miR-29b-1 and miR-29a targets in tamoxifen-sensitive and tamoxifen-resistant human breast cancer cells
GSE81637 Transcriptome analysis of virus infected tissues
GSE81698 Epigenetic targeting of immunocheckpoint PD-L1 by BET bromodomain inhibition
GSE81730 Single cell gene expression profiling in normal HSCs and CML stem cells
GSE81747 Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (pooled infection)
GSE81748 Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of beta-globin locus (separate infection)
GSE81749 Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq TNF-alpha treatment versus mock
GSE81750 Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of 15 SEs, 71 HSs, 241 sgRNAs
GSE81795 An epigenetic mark of polycomb response elements implemented by Trx/MLL/COMPASS
GSE81839 SIRT7 is an RNA-activated protein lysine deacylase [RIP ribosomal RNA]
GSE81840 SIRT7 is an RNA-activated protein lysine deacylase [RIP-seq ribo-zero]
GSE81841 SIRT7 is an RNA-activated protein lysine deacylase
GSE81881 Genetic variants alter T-bet binding and gene expression in mucosal inflammatory disease
GSE81884 Multiplexed engineering and analysis of endogenous enhancer activity in single cells
GSE81942 PRMT1 and CSNK1a1 control epidermal progenitor maintenance
GSE81951 Evaluation of the immunogenicity of live-attenuated influenza vaccines in nasal epithelial cells in primary differentiated human nasal epithelial cells [RNA-Seq]
GSE81969 Mapping H4K20me3 onto the chromatin landscape of senescent cells indicates a function in control of cell senescence and tumor suppression through preservation of genetic and epigenetic stability.
GSE81978 Effect of SF3B1 suppression in cancer cells with different SF3B1 copy-number levels
GSE82032 Human basal-like breast cancer cell line HCC1143 treated with BET inhibitor JQ1 in combination with MEK inhibitor Trametinib or PI3K/mTOR inhibitor BEZ235
GSE82061 Position effects influence HIV provirus latency reversal
GSE82104 Acriflavine inhibits the epithelial-to-mesenchymal transition in vitro in liver and pancreatic cancer cells (part of study on PANC1 cells treated with CoCl2)
GSE82110 Acriflavine inhibits the epithelial-to-mesenchymal transition in vitro in liver and pancreatic cancer cells (part of study on HepG2)
GSE82116 Transcription control by the ENL YEATS domain in acute leukemia [ChIP-seq]
GSE82117 Transcription control by the ENL YEATS domain in acute leukemia [RNA-seq]
GSE82118 Transcription control by the ENL YEATS domain in acute leukemia
GSE82147 Genome wide impact of loss of mechanoluminal stimulation on neonatal intestine
GSE82236 Whole-transcriptome profilings between a pair of HCA7-derived KRAS-wildtype cetuximab sensitive and resistant colon cancer cells from 3D culture
GSE82299 Acriflavine inhibits the epithelial-to-mesenchymal transition in vitro in liver and pancreatic cancer cells
GSE82330 INO80 governs super-enhancer-mediated oncogenic transcription and tumor growth in melanoma [ATAC-seq]
GSE82332 INO80 governs super-enhancer-mediated oncogenic transcription and tumor growth in melanoma [ChIP-seq_NextSeq]
GSE82333 INO80 governs super-enhancer-mediated oncogenic transcription and tumor growth in melanoma [RNA-seq]
GSE82334 INO80 governs super-enhancer-mediated oncogenic transcription and tumor growth in melanoma
GSE83126 Effect of 48h treatment with 100nM GSK2879552 on T-ALL cell lines LOUCY and PEER
GSE83128 Oncogenic ZEB2 activation drives sensitivity towards LSD1 inhibition in T-cell acute lymphoblastic leukemia
GSE83285 Evaluation of the immunogenicity of live-attenuated influenza vaccines in nasal epithelial cells in primary differentiated human nasal epithelial cells
GSE83296 Genome-wide characterization of mammalian promoters with distal enhancer functions
GSE83402 Benchmarking of RNA-sequencing analysis workflows using whole-transcriptome RT-qPCR expression data
GSE83419 ChIP-seq analysis of Guanylate Cyclase Soluble Subunit Beta-3 (GUCY1B3 or sGCβ1) binding to chromatin DNA
GSE83427 Assay for Transposase-Accessible Chromatin with high throughput sequencing (ATAC-Seq) reveals lncRNA MANTIS important for the angiogenic function of endothelial cells
GSE83549 RNA-seq characterization of downstream effects of upregulating SMN2 via down-regulating PRC2 or blocking the PRC2:SMN-AS1 interaction with a mixmer oligonucleotide
GSE83560 Gene expression profiling of papillary thyroid cancer from central and invasive regions
GSE83660 High Resolution Mapping of RNA Polymerases Identifies Mechanisms of Sensitivity and Resistance to BET Inhibitors in t(8;21) AML
GSE83671 MLL-AF4 Spreading Identifies Binding Sites that Are Distinct from Super-Enhancers and that Govern Sensitivity to DOT1L Inhibition in Leukemia.
GSE83719 Transcriptome profiling of hematopoietic cells derived from human pluripotent stem cells
GSE83724 PAX3-FOXO1 requires BRD4 to drive oncogene addiction in RMS cells [RNA-seq]
GSE83725 PAX3-FOXO1 establishes myogenic super enhancers and recruits BRD4 de novo [7250 ChIP-seq]
GSE83726 PAX3-FOXO1 establishes myogenic super enhancers [RMS Chip-seq]
GSE83727 Chromatin looping evidence between PAX3-FOXO1 bound super enhancer and MYOD1 promoter [4C-seq]
GSE83728 Epigenetic Lanscape and BRD4 Transcriptional Dependency of PAX3-FOXO1 Driven Rhabdomyosarcoma
GSE83772 The FAM46C gene encodes a non-canonical poly(A) polymerase and acts as an onco-suppressor in multiple myeloma
GSE83794 Next-generation Sequencing (NGS) identified genome-wide profiles of piwi-interacting RNAs (piRNAs) in human Epithelial Ovarian Cancers (EOCa)
GSE83894 A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity
GSE83905 RNA-seq analysis of mRNAs immunoprecipitated by wild-type (WT) or phospho-mimetic (S200D) FLAG-LIN28A in PA1 cells
GSE83906 RNA-seq analysis of mRNAs immunoprecipitated by wild-type (WT), phospho-mimetic (S200D), or phospho-null (S200A) FLAG-LIN28A
GSE83925 Regulation of PRDM1 (PRDBF-1/BLIMP1) isoform expression in T cells by an Inflammatory Bowel Disease -associated polymorphism
GSE83945 Genome-wide profiling of mature piRNAs in human Neuroblastoma (NB) cell lines
GSE83968 The non-coding variant rs1800734 enhances DCLK3 expression through long-range interaction and promotes colorectal cancer progression
GSE83990 Zone dependent distinctive gene expression profile of the normal human liver tissue
GSE84052 RAG1 targeting in the genome is dominated by chromatin interactions mediated by the non-core regions of RAG1 and RAG2
GSE84068 Post-transcriptional 3’UTR cleavage of mRNA transcripts generates thousands of stable uncapped autonomous RNA fragments
GSE84114 Profiling in vivo Bone Lesion and ex vivo Bone-In-Culture Array Samples by Next-Generation Sequencing
GSE84188 Ebolavirus species associated with differential pathogenicity induce distinct host responses in human macrophages
GSE84287 A novel method for genome-wide profiling of poly(A)-tail lengths
GSE84336 Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells [Toxin]
GSE84338 Campylobacter concisus pathotypes induce distinct global responses in intestinal epithelial cells
GSE84352 Read-through transcription as a general mechanism mediating methylation and silencing of intragenic CGIs [H3K36me3_ChIP-seq]
GSE84355 Read-through transcription as a general mechanism mediating methylation and silencing of intragenic CGIs
GSE84389 Network-based, cross-cohort discovery of transcriptional mechanisms presiding over maintenance of high-risk neuroblastoma subtype state
GSE84405 ARID1A-mutated ovarian cancers depend on HDAC6 activity
GSE84465 Single-Cell RNAseq analysis of diffuse neoplastic infiltrating cells at the migrating front of human glioblastoma
GSE84471 A Druggable TCF4- and BRD4-dependent Transcriptional Network Sustains Malignancy in Blastic Plasmacytoid Dendritic Cell Neoplasm (RNA-Seq)
GSE84504 Modeling Trilateral Retinoblastoma using Human Embryonic Stem Cells
GSE84618 Dysregulation of the epigenetic landscape of normal aging in Alzheimer's disease [ChIP-Seq]
GSE84623 A Druggable TCF4- and BRD4-dependent Transcriptional Network Sustains Malignancy in Blastic Plasmacytoid Dendritic Cell Neoplasm (ATAC-Seq)
GSE84628 ChIP-seq of Active Histone Mark (H3K27ac) and Myogenic Regulatory Factors (MYF5 and MYOD) in Fusion Negative Rhabdomyosarcoma Cell Lines
GSE84630 Fusion Negative Rhabdomyosarcoma Cell Lines
GSE84657 Dynamic and stable enhancer-promoter contacts regulate terminal differentiation [ChIP-Seq]
GSE84662 Dynamic and stable enhancer-promoter contacts regulate terminal differentiation
GSE84675 Effect of BCL11B overexpression on transcriptome of T-cell acute lymphoblastic leukemia (T-ALL) cells
GSE84677 BCL11B DNA binding sites in progenitor and differentiated populations in the human thymus
GSE84678 BCL11B
GSE84683 Differential expression analysis of RNA-seq data from melanocytes driven by tumor cell-derived exosomes
GSE84686 Innate to adaptive: Human IFN-gamma producing CD4+ T cells can derive directly from CXCL8-producing recent thymic emigrants.
GSE84706 Experimental validation of candidate regulators of KRAS transcriptional components.
GSE84865 Ebola virus glycoprotein variant with increased infectivity for human cells dominated the 2013-2016 outbreak
GSE84869 H3K36me2 occupancy profiling by high throughput sequencing from control and WHSC1 knockdown PC3 cells.
GSE84877 Effect of from Human Umbilical Vein Endothelial Cells
GSE84891 Expression analysis of the TAF1 syndrome
GSE84897 Genome-wide analysis of DNA hydroxymethylation and methylation during epstein-barr virus infection.
GSE85020 Epigenetic silencing of the tumor suppressor RASSF4 favors multiple myeloma progression
GSE85057 HMGB2 orchestrates the chromatin landscape of senescence-associated secretory phenotype gene loci.
GSE85066 In vitro cultured H7 human embryonic stem cells (WiCell) and H7-derived downstream early mesoderm progenitors
GSE85075 Next-Generation Sequencing identified piRNA profiles in healthy and Alzheimer’s-affected human brain
GSE85081 Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes [ChIP-Seq]
GSE85082 Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes [RNA-Seq PROLIF-SEN]
GSE85083 Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes [RNA-Seq siRNA H2A.Z]
GSE85085 Control of gene expression in senescence through transcriptional read-through of convergent protein-coding genes
GSE85089 Integrator orchestrates RAS/ERK1/2 signaling transcriptional programs
GSE85111 inDrop single cell RNA-seq of hematopoietic cells derived from human pluripotent stem cells
GSE85112 Hematopoietic Stem and Progenitor Cells from Human Pluripotent Stem Cells via Transcription Factor Conversion of Hemogenic Endothelium
GSE85117 INO80 is required for oncogenic transcription and tumor growth in non-small cell lung cancer [ChIP-seq]
GSE85118 INO80 is required for oncogenic transcription and tumor growth in non-small cell lung cancer [RNA-seq]
GSE85119 INO80 is required for oncogenic transcription and tumor growth in non-small cell lung cancer
GSE85161 DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [RNA-Seq]
GSE85164 DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome
GSE85169 MEK inhibition profoundly reprograms myogenic super enhancers in mutant-RAS driven Rhabdomyosarcoma
GSE85170 MEK inhibition rewires enhancer landscapes in RAS-driven Rhabdomyosarcoma to unlock a myogenic differentation block
GSE85171 Epigenetic Reprogramming of mutant RAS-driven Rhabdomyosarcoma via MEK Inhibition
GSE85241 A single-cell transcriptome atlas of the human pancreas [CEL-seq2]
GSE85246 Epigenome maps of time-resolved monocyte to macrophage differentiation and innate immune memory
GSE85315 Genome-wide changes in H3K4me3 after MEN1 silencing in MCF-7 cells
GSE85317 Analysis of genome-wide occupancy of menin, MLL1 and MLL2 in MCF-7 cells
GSE85337 Natural Selection has Shaped Coding and Non-coding Transcription in Primate CD4+ T-cells
GSE85455 ADAR1 controls apoptosis of stressed cells by inhibiting Staufen-mediated mRNA decay
GSE85575 An automatec microwell platform for large-scale single cell RNA-seq.
GSE85610 Gene expression profiles in response to proanthocyanidins in pancreatic cancer cells
GSE85699 Serum miR-122-5p and miR-206 expression: Non-invasive prognostic biomarkers for renal cell carcinoma
GSE85853 Chromatin accessibility landscape of cutaneous T cell lymphoma and dynamic response to HDAC inhibitors
GSE85886 Epigenome Mapping in pancreatic cancer cells
GSE85987 Inhibition of endothelial Notch signaling attenuates inflammation
GSE85988 MLL-AF4 binds directly to a BCL-2 specific enhancer and impacts H3K27 acetylation
GSE85995 Function and hormonal regulation of GATA3 in human first trimester placentation
GSE86153 Identification of extensive cellular diversity and maturation of active neuronal networks in long-term cultures of human brain organoids
GSE86154 O-GlcNAc Aminidase is an RNA Pol II Elongation Factor Coupled to Pausing Factors SPT5 and TIF1b
GSE86232 ERK potentiates transactivation and oncogenic function of ERG by phosphorylation induced dissociation of PRC2 complex
GSE86238 Interaction with ZMYND11 mediates opposing roles of Ras-responsive transcription factors ETS1 and ETS2
GSE86239 Interaction with ZMYND11 mediates opposing roles of Ras-responsive transcription factors ETS1 and ETS2
GSE86240 Interaction with ZMYND11 mediates opposing roles of Ras-responsive transcription factors ETS1 and ETS2
GSE86244 Early Chronological Aging in Human Adipose-Derived Stem Cells Marked by Distinct Transcriptional Regulation Compared to Differentiated Cells
GSE86316 Messenger RNA expression after silencing or inhibition of MEN1in MCF-7 breast cancer cells
GSE86393 Direct and tissue-specific assessment of the damaging potential of regulatory SNPs
GSE86468 Single cell transcriptomics defines human islet cell signatures and reveals cell-type-specific expression changes in type 2 diabetes [bulk]
GSE86469 Single cell transcriptomics defines human islet cell signatures and reveals cell-type-specific expression changes in type 2 diabetes [single cell]
GSE86473 Single cell transcriptomics defines human islet cell signatures and reveals cell-type-specific expression changes in type 2 diabetes
GSE86538 ChIP-seq of ER and RUNX2 in MCF7 breast cancer cell lines
GSE86556 The 3’-UTR of MYC couples RNA polymerase II function to ribonucleotide levels
GSE86618 Single Cell RNA-Sequencing Identifies Diverse Roles of Epithelial Cells in Idiopathic Pulmonary Fibrosis
GSE86644 Ultrasound-mediated ultra effective cellular reprogramming of human fibroblasts into neural progenitor-like cells [RNA-Seq]
GSE86646 An ultra effective method of generating extra multipotent cells from human fibroblasts via ultrasound-directed instant chromatin remodeling
GSE86810 Genome-wide histone modification profiling in endometriosis cells
GSE86855 A cytoplasmic COMPASS is necessary for cell survival and triple-negative breast cancer pathogenesis by regulating metabolism
GSE86857 A total RNA-Seq screen reveals that the splicing inhibitor Isoginkgetin blocks transcription elongation
GSE86864 ChIP-seq analysis of H3K27ac in K562 cells with shRNA-mediated depeltion of TFAM expression
GSE86910 RNA-seq transcriptonal profiling in human primary adult erythroid progenitor cells (ProEs) after shRNA-mediated depletion of TFAM and PHB2 expression
GSE86912 Quantitative Proteomic and Transcriptomic Analysis Reveals Post-Transcriptional Regulation of Mitochondrial Biogenesis during Erythropoiesis
GSE87039 Genomic and proteomic resolution of heterochromatin and its restriction of alternate fate genes (ChIP-seq)
GSE87040 Genomic and proteomic resolution of heterochromatin and its restriction of alternate fate genes (RNA-seq)
GSE87041 Genomic and proteomic resolution of heterochromatin and its restriction of alternate fate genes
GSE87055 Dynamic gene regulatory networks of human myeloid differentiation [RNA-seq_siRNA]
GSE87114 Dynamic gene regulatory networks of human myeloid differentiation [ATAC-seq_siRNA]
GSE87205 Ultrasound-mediated ultra effective cellular reprogramming of human fibroblasts into neural progenitor-like cells
GSE87218 Epigenome maps of time-resolved monocyte to macrophage differentiation and innate immune memory (ATAC-Seq)
GSE87273 C9/ALS Human Embryonic Stem Cells and C9/ALS Induced Pluripotent Stem Cells
GSE87281 SMN deficiency in spinal muscular atrophy causes widespread intron retention and DNA damage
GSE87328 eIF1 modulates the recognition of sub-optimal translation start sites and steers gene expression control mediated by uORFs
GSE87392 Comparison of Eomes-negative and Eomes-positive human liver NK cells by RNASeq
GSE87418 Enhancer Remodeling During Adaptive Bypass to MEK Inhibition Is Attenuated by Pharmacological Targeting of the P-TEFb Complex (ChIP-seq)
GSE87419 Enhancer Remodeling During Adaptive Bypass to MEK Inhibition Is Attenuated by Pharmacological Targeting of the P-TEFb Complex (RNA-seq)
GSE87424 Enhancer Remodeling During Adaptive Bypass to MEK Inhibition Is Attenuated by Pharmacological Targeting of the P-TEFb Complex
GSE87476 Mitotic Transcription and Waves of Gene Reactivation During Mitotic Exit
GSE87517 Immune escape in breast cancer during in situ to invasive carcinoma transition
GSE87532 Tristetraprolin disables prostate cancer maintenance by impairing proliferation and metabolic function
GSE87552 Inhibition of endothelial Notch signaling attenuates inflammation [ChIP-Seq]
GSE87563 RNAseq of normal associate fibroblasts after treatment with large oncosomes from prostate cancer cells
GSE87577 Transcriptional study of ARN8 cells treated with novel DHODH inhibitors
GSE87607 R-loops promote antisense transcription across the mammalian genome
GSE87767 mRNA cap methyltransferase, RNMT-RAM, promotes RNA pol II transcription
GSE87785 Sequencing-based analyses characterize a tumor suppressive role of mir-1271 repressed by DNA hypermethylation in gastric cancer
GSE87949 small RNA-seq from stomach (ENCSR003SZJ)
GSE87959 small RNA-seq from subcutaneous adipose tissue (ENCSR020VES)
GSE87965 small RNA-seq from ovary (ENCSR024CRN)
GSE87976 small RNA-seq from body of pancreas (ENCSR033TKS)
GSE88019 small RNA-seq from Peyer's patch (ENCSR091JNF)
GSE88027 small RNA-seq from body of pancreas (ENCSR099ACU)
GSE88057 small RNA-seq from stomach (ENCSR133GQJ)
GSE88079 small RNA-seq from transverse colon (ENCSR168XPO)
GSE88093 small RNA-seq from transverse colon (ENCSR183YQY)
GSE88103 small RNA-seq from tibial nerve (ENCSR203DPX)
GSE88123 small RNA-seq from prostate gland (ENCSR227FNZ)
GSE88124 small RNA-seq from testis (ENCSR229WIW)
GSE88128 small RNA-seq from esophagus muscularis mucosa (ENCSR233DGJ)
GSE88146 small RNA-seq from esophagus squamous epithelium (ENCSR262TBN)
GSE88147 small RNA-seq from adrenal gland (ENCSR264COY)
GSE88153 small RNA-seq from gastroesophageal sphincter (ENCSR269YSX)
GSE88164 small RNA-seq from esophagus squamous epithelium (ENCSR289GGY)
GSE88169 small RNA-seq from esophagus muscularis mucosa (ENCSR295NAK)
GSE88177 small RNA-seq from spleen (ENCSR307FBN)
GSE88188 small RNA-seq from transverse colon (ENCSR316SXP)
GSE88197 small RNA-seq from prostate gland (ENCSR332RHR)
GSE88218 small RNA-seq from thyroid gland (ENCSR359CVC)
GSE88232 small RNA-seq from esophagus squamous epithelium (ENCSR379GPS)
GSE88236 small RNA-seq from esophagus muscularis mucosa (ENCSR383PLJ)
GSE88260 small RNA-seq from stomach (ENCSR418FVT)
GSE88333 small RNA-seq from transverse colon (ENCSR525WFB)
GSE88344 small RNA-seq from upper lobe of left lung (ENCSR539RDF)
GSE88369 small RNA-seq from stomach (ENCSR573RGL)
GSE88379 small RNA-seq from spleen (ENCSR587CPE)
GSE88381 small RNA-seq from spleen (ENCSR593MVW)
GSE88393 small RNA-seq from right lobe of liver (ENCSR603XUX)
GSE88399 small RNA-seq from omental fat pad (ENCSR610GDH)
GSE88404 small RNA-seq from adrenal gland (ENCSR612WDT)
GSE88414 small RNA-seq from testis (ENCSR626GVP)
GSE88424 small RNA-seq from right lobe of liver (ENCSR634VLA)
GSE88426 small RNA-seq from sigmoid colon (ENCSR635SLB)
GSE88432 small RNA-seq from gastroesophageal sphincter (ENCSR646HQQ)
GSE88490 small RNA-seq from Peyer's patch (ENCSR718AXQ)
GSE88499 small RNA-seq from upper lobe of left lung (ENCSR737NPO)
GSE88531 small RNA-seq from esophagus squamous epithelium (ENCSR779BVZ)
GSE88559 small RNA-seq from vagina (ENCSR812JEU)
GSE88608 small RNA-seq from gastroesophageal sphincter (ENCSR866ZSG)
GSE88618 small RNA-seq from sigmoid colon (ENCSR880LXP)
GSE88619 small RNA-seq from sigmoid colon (ENCSR882DFF)
GSE88624 small RNA-seq from uterus (ENCSR887HNW)
GSE88644 small RNA-seq from spleen (ENCSR917CQJ)
GSE88673 small RNA-seq from upper lobe of left lung (ENCSR961FIG)
GSE88679 small RNA-seq from sigmoid colon (ENCSR968DMR)
GSE88694 small RNA-seq from upper lobe of left lung (ENCSR996VHB)
GSE88695 small RNA-seq from gastroesophageal sphincter (ENCSR998CRC)
GSE88748 Click chemistry enables comprehensive preclinical evaluation of targeted epigenetic therapies [Click-Seq 1]
GSE88751 Click chemistry enables comprehensive preclinical evaluation of targeted epigenetic therapies
GSE88802 Novel metastatic models of human esophageal adenocarcinoma highlight the importance of E-cadherin in cancer metastasis
GSE88805 RNA binding proteins in cancer spliceome
GSE88817 In situ CAPTURE of chromatin interactions by biotinylated dCas9
GSE88858 RNA-Seq gene profiling comparison from human cDC subsets and pre-cDC subsets
GSE88894 TFEB controls vascular development by regulating the proliferation of endothelial cells (TFEB ChIp-seq)
GSE88896 TFEB controls vascular development by regulating the proliferation of endothelial cells
GSE88942 RNA-Seq from early time points in the kidney differentiation protocol
GSE88997 Reconstituting development of pancreatic intraepithelial neoplasia from primary human pancreas duct cells

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