dichromat Public

HISAT-3N-FAST Public

bighaohao's hisat-3n

hey Public

Some useful / useless commands

llmtop Public

coralsnake Public

cutseq Public

✂️ Trim sequencing adapters from NGS data automatically

countmut Public

y9c Public

m6A-eTAMseq Public

🧪 An Enzymatic Method for Assaying m6A Modifications at Single Base Resolution

m6A-CAMseq Public

🧪 m6A-CAM-seq

trichromat Public template

🧬 A general pipeline for data processing of 3 letter sequencing methods.

igvplot Public

webblast Public

sanger Public

Sanger sequencing toolkit: chromatogram visualization, mutation calling, QC, base-calling, trimming, assembly and export (CLI + Python + MCP).

graph-easy-py Public

Python port of Graph::Easy - render graphs as beautiful ASCII art

bwamem Public

md2html Public

generate html report from markdown file

vllm Public

A high-throughput and memory-efficient inference and serving engine for LLMs

openclaw Public

Your own personal AI assistant. Any OS. Any Platform. The lobster way. 🦞

hisat2 Public

Graph-based alignment (Hierarchical Graph FM index)

wtd_site Public

scmd-calmorph Public

Tool for quantify morphological trait of budding yeast (fork version maintained by Chang)

curated_reference_genes Public

Curative db for genes

samtools Public

Tools (written in C using htslib) for manipulating next-generation sequencing data

pbr Public

drunk on perbase pileups and lua expressions

metagene Public

Metagene Profiling Analysis and Visualization

blog.yech.xyz Public

Will start blogging someday

pybwa Public

Python language bindings for bwa

UMICollapse Public

Accelerating the deduplication and collapsing process for reads with Unique Molecular Identifiers (UMI). Heavily optimized for scalability and orders of magnitude faster than a previous tool.

bullet-theme.zsh Public

🚄 An oh-my-zsh shell theme based on the Powerline Vim plugin