Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
Comparison of methods for trajectory inference on single-cell data 🥇
A collection of 50+ trajectory inference methods within a common interface 📥📤
Open-source usearch
Cluster single cells and analyze cell clade relationships with colorful visualizations.
Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
Protein structure alignment and search algorithm
memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping
Natural Language Search and Analysis of High Dimensional Genomic Data
I am sharing my code repository to understand the working and principle of working of various BioInformatics code in Python
Predicting regulatory DNA elements based on epigenomic signatures
L1000 peak deconvolution based on Bayesian analysis
Fast and simple algorithms for computing both LCSk and LCSk+
Bioinformatics Guide
This is a curated list of tutorials, projects, libraries, videos, papers, books and anything related to applications of Deep Learning to biomedicine. Feel free to make a pull request to contribute to this list.
deMULTIplex2: robust sample demultiplexing for scRNA-seq
Official code repository for JAX-CNV
CONTRAfold-SE - Learning RNA secondary structure (only) from structure probing data
This project aims on making the algorithms covered in the corresponding lecture at LMU Munich easier to understand by providing step-by-step logging and result visualization.
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