Repositories list

• Curated-List

  Public
  A Curated Reading List Maintained by Shixiang and His Team

  learning bioinformatics database + 3

  learning bioinformatics database resource cancer dev

  Python

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  MIT License

  •0 0 forks•3 3 stars•0 0 issues•0 0 pull requests•Updated Jun 12, 2026Jun 12, 2026

• geokit

  Public
  Tools for Accessing and Working with the Gene Expression Omnibus (GEO)

  R

  •

  Other

  •0 0 forks•5 5 stars•0 0 issues•1 1 pull request•Updated Jun 12, 2026Jun 12, 2026

• rpkgkit

  Public
  R

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  Other

  •0 0 forks•1 1 star•0 0 issues•0 0 pull requests•Updated Jun 12, 2026Jun 12, 2026

• .github

  Public
  0 0 forks•0 0 stars•0 0 issues•0 0 pull requests•Updated Jun 10, 2026Jun 10, 2026

• paper_SigBridgeR

  Public
  R

  •0 0 forks•1 1 star•0 0 issues•0 0 pull requests•Updated Jun 8, 2026Jun 8, 2026

• SigBridgeR

  Public
  SigBridgeR: Integrative Framework and Toolkit for Single-Cell Screening of Phenotype-Associated Cells

  package r single-cell + 1

  package r single-cell phenotype-mapping

  R

  •

  GNU General Public License v3.0

  •1 1 fork•8 8 stars•1 1 issue•0 0 pull requests•Updated May 30, 2026May 30, 2026

• bioinformatics-god-skill

  Public
  生物信息学之神.skill — 综合50位顶级学者的集体智慧操作系统 | God of Bioinformatics: Collective cognitive OS from 50 top scholars

  MIT License

  •3 3 forks•0 0 stars•0 0 issues•0 0 pull requests•Updated May 19, 2026May 19, 2026

• oxo-flow-venus

  Public
  experimental!!!

  Rust

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  Apache License 2.0

  •0 0 forks•0 0 stars•0 0 issues•0 0 pull requests•Updated May 19, 2026May 19, 2026

• oxo-flow-clindet

  Public
  experimental!!!

  R

  •0 0 forks•0 0 stars•0 0 issues•0 0 pull requests•Updated May 18, 2026May 18, 2026

• oxo-flow-circrna

  Public
  experimental!!!

  R

  •

  Other

  •0 0 forks•1 1 star•0 0 issues•0 0 pull requests•Updated May 18, 2026May 18, 2026

• shiny-portal

  Public
  R

  •0 0 forks•1 1 star•0 0 issues•0 0 pull requests•Updated May 5, 2026May 5, 2026

• courses

  Public
  http://biotree.top:38123/courses/

  SCSS

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  Other

  •0 0 forks•0 0 stars•1 1 issue•0 0 pull requests•Updated Apr 29, 2026Apr 29, 2026

• skills

  Public
  Skills for Real Engineers. Straight from my .claude directory.

  Shell

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  MIT License

  •11k 11k forks•0 0 stars•0 0 issues•0 0 pull requests•Updated Apr 28, 2026Apr 28, 2026

• otk

  Public
  Python

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  Apache License 2.0

  •0 0 forks•0 0 stars•0 0 issues•0 0 pull requests•Updated Apr 27, 2026Apr 27, 2026

• SigBridgeRUtils

  Public
  Some Utilities for SigBridgeR

  R

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  GNU General Public License v3.0

  •0 0 forks•0 0 stars•0 0 issues•0 0 pull requests•Updated Apr 25, 2026Apr 25, 2026

• ai-rollup

  Public
  Python

  •0 0 forks•0 0 stars•0 0 issues•0 0 pull requests•Updated Apr 24, 2026Apr 24, 2026

• appnet

  Public
  shiny-portal https://github.com/WangLabCSU/shiny-portal http://biotree.top:38124/

  HTML

  •0 0 forks•0 0 stars•0 0 issues•0 0 pull requests•Updated Apr 23, 2026Apr 23, 2026

• andrej-karpathy-skills

  Public
  A single CLAUDE.md file to improve Claude Code behavior, derived from Andrej Karpathy's observations on LLM coding pitfalls.

  18k 18k forks•0 0 stars•0 0 issues•0 0 pull requests•Updated Apr 20, 2026Apr 20, 2026

• medical-research-skills

  Public
  Hundreds of agent skills for medical research, including protocol design, data analysis, evidence insights, and academic writing.

  Python

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  MIT License

  •77 77 forks•0 0 stars•0 0 issues•0 0 pull requests•Updated Apr 20, 2026Apr 20, 2026

• protocol_ggalign

  Public
  Source code and data for the ggalign protocol paper

  R

  •0 0 forks•2 2 stars•0 0 issues•0 0 pull requests•Updated Apr 15, 2026Apr 15, 2026

• zhuge-perspective-skill

  Public
  诸葛综合思维操作系统 — 融合8位顶尖思维者心智模型的AI Skill

  MIT License

  •0 0 forks•0 0 stars•0 0 issues•0 0 pull requests•Updated Apr 13, 2026Apr 13, 2026

• faers

  Public
  R interface for FDA Adverse Event Reporting System

  r-package adverse-events signal-detection + 4

  r-package adverse-events signal-detection drug-safety pharmacovigilance faers faers-procedure

  R

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  Other

  •9 9 forks•47 47 stars•8 8 issues•0 0 pull requests•Updated Apr 10, 2026Apr 10, 2026

• awesome-persona-skills

  Public
  同事.skill、老板.skill、前任.skill、自己.skill、永生.skill、女娲.skill......

  271 271 forks•0 0 stars•0 0 issues•0 0 pull requests•Updated Apr 9, 2026Apr 9, 2026

• nobel-medicine-minds

  Public
  🏅 Open-source cognitive frameworks of Nobel Medicine laureates (2004-2025), distilled into runnable thinking tools

  Other

  •1 1 fork•0 0 stars•0 0 issues•0 0 pull requests•Updated Apr 6, 2026Apr 6, 2026

• OpenClaw-Medical-Skills

  Public
  The largest open-source medical AI skills library for OpenClaw🦞.

  Python

  •374 374 forks•0 0 stars•0 0 issues•0 0 pull requests•Updated Mar 27, 2026Mar 27, 2026

• offline-communications

  Public
  学生线下交流跟踪系统

  JavaScript

  •4 4 forks•0 0 stars•0 0 issues•1 1 pull request•Updated Mar 20, 2026Mar 20, 2026

• r4ds

  Public
  R for Data Science 笔记合集网站

  TeX

  •3 3 forks•5 5 stars•0 0 issues•0 0 pull requests•Updated Mar 18, 2026Mar 18, 2026

• blit

  Public
  Execute command line tool from R

  bioinformatics command-line r-package

  bioinformatics command-line r-package

  R

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  GNU General Public License v3.0

  •10 10 forks•21 21 stars•6 6 issues•0 0 pull requests•Updated Mar 17, 2026Mar 17, 2026

• bioinfo-daily-skill

  Public
  Python

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  MIT License

  •0 0 forks•0 0 stars•0 0 issues•0 0 pull requests•Updated Mar 11, 2026Mar 11, 2026

• BLIT-circrna-pipeline

  Public
  An MVP CircRNA pipeline built with BLIT.

  R

  •1 1 fork•2 2 stars•0 0 issues•0 0 pull requests•Updated Mar 9, 2026Mar 9, 2026