Jump to content
Wikipedia The Free Encyclopedia

GFRA1

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
GFRA1
Identifiers
Aliases GFRA1 , GDNFR, GDNFRA, GFR-ALPHA-1, RET1L, RETL1, TRNR1, GDNF family receptor alpha 1
External IDsOMIM: 601496; MGI: 1100842; HomoloGene: 3855; GeneCards: GFRA1; OMA:GFRA1 - orthologs
Gene location (Human)
Chromosome 10 (human)
Chr. Chromosome 10 (human) [1]
Band 10q25.3Start116,056,925 bp [1]
End116,273,467 bp [1]
Gene location (Mouse)
Chromosome 19 (mouse)
Chr. Chromosome 19 (mouse)[2]
Band 19 D2|19 54.18 cMStart58,224,036 bp [2]
End58,444,341 bp [2]
RNA expression pattern
Bgee
Human Mouse (ortholog)
  • trigeminal ganglion

  • spinal ganglia

  • pars reticulata

  • parietal pleura

  • corpus epididymis

  • lactiferous duct

  • pars compacta

  • nipple

  • left uterine tube

  • cardia
  • vestibular membrane of cochlear duct

  • habenula

  • facial motor nucleus

  • dentate gyrus of hippocampal formation granule cell

  • left lobe of liver

  • lateral septal nucleus

  • iris

  • medullary collecting duct

  • ciliary body

  • substantia nigra
More reference expression data
BioGPS
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2674

14585

Ensembl

ENSG00000151892

ENSMUSG00000025089

UniProt

P56159

P97785

RefSeq (mRNA)
NM_001145453
NM_005264
NM_145793
NM_001348096
NM_001348098

NM_001348099

NM_001285457
NM_010279

RefSeq (protein)
NP_001138925
NP_005255
NP_665736
NP_001335025
NP_001335027

NP_001335028
NP_001369485
NP_001369486
NP_001369487
NP_001369488
NP_001369489
NP_001369490

NP_001272386
NP_034409

Location (UCSC)Chr 10: 116.06 – 116.27 Mb Chr 19: 58.22 – 58.44 Mb
PubMed search[3] [4]
Wikidata

GDNF family receptor alpha-1 (GFRα1), also known as the GDNF receptor, is a protein that in humans is encoded by the GFRA1 gene.[5] [6]

Function

[edit ]

Glial cell line-derived neurotrophic factor (GDNF) and neurturin (NTN) are two structurally related, potent neurotrophic factors that play key roles in the control of neuron survival and differentiation. The protein encoded by this gene is a member of the GDNF receptor family. It is a glycosylphosphatidylinositol(GPI)-linked cell surface receptor for both GDNF and NTN, and mediates activation of the RET tyrosine kinase receptor. This gene is a candidate gene for Hirschsprung disease. Two alternatively spliced transcript variants encoding different isoforms have been described for this gene.[7]

Interactions

[edit ]

GDNF family receptor alpha 1 has been shown to interact with GDNF[8] [9] and RET proto-oncogene.[9] [10]

See also

[edit ]

References

[edit ]
  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000151892Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000025089Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Gorodinsky A, Zimonjic DB, Popescu NC, Milbrandt J (March 1998). "Assignment of the GDNF family receptor alpha-1 (GFRA1) to human chromosome band 10q26 by in situ hybridization". Cytogenetics and Cell Genetics. 78 (3–4): 289–90. doi:10.1159/000134674. PMID 9465905.
  6. ^ Angrist M, Jing S, Bolk S, Bentley K, Nallasamy S, Halushka M, Fox GM, Chakravarti A (Mar 1998). "Human GFRA1: cloning, mapping, genomic structure, and evaluation as a candidate gene for Hirschsprung disease susceptibility". Genomics. 48 (3): 354–62. doi:10.1006/geno.1997.5191. PMID 9545641.
  7. ^ "Entrez Gene: GFRA1 GDNF family receptor alpha 1".
  8. ^ Jing S, Yu Y, Fang M, Hu Z, Holst PL, Boone T, Delaney J, Schultz H, Zhou R, Fox GM (Dec 1997). "GFRalpha-2 and GFRalpha-3 are two new receptors for ligands of the GDNF family". The Journal of Biological Chemistry. 272 (52): 33111–7. doi:10.1074/jbc.272.52.33111 . PMID 9407096.
  9. ^ a b Cik M, Masure S, Lesage AS, Van Der Linden I, Van Gompel P, Pangalos MN, Gordon RD, Leysen JE (Sep 2000). "Binding of GDNF and neurturin to human GDNF family receptor alpha 1 and 2. Influence of cRET and cooperative interactions". The Journal of Biological Chemistry. 275 (36): 27505–12. doi:10.1074/jbc.M000306200 . PMID 10829012.
  10. ^ Klein RD, Sherman D, Ho WH, Stone D, Bennett GL, Moffat B, Vandlen R, Simmons L, Gu Q, Hongo JA, Devaux B, Poulsen K, Armanini M, Nozaki C, Asai N, Goddard A, Phillips H, Henderson CE, Takahashi M, Rosenthal A (Jun 1997). "A GPI-linked protein that interacts with Ret to form a candidate neurturin receptor". Nature. 387 (6634): 717–21. Bibcode:1997Natur.387..717K. doi:10.1038/42722 . PMID 9192898. S2CID 4360246.

Further reading

[edit ]
[edit ]
  • Overview of all the structural information available in the PDB for UniProt: P56159 (GDNF family receptor alpha-1) at the PDBe-KB.
PDB gallery
Angiopoietin
CNTF
EGF (ErbB)
EGF
(ErbB1/HER1)
ErbB2/HER2
ErbB3/HER3
ErbB4/HER4
FGF
FGFR1
FGFR2
FGFR3
FGFR4
Unsorted
HGF (c-Met)
IGF
IGF-1
IGF-2
Others
LNGF (p75NTR)
PDGF
RET (GFL)
GFRα1
GFRα2
GFRα3
GFRα4
Unsorted
SCF (c-Kit)
TGFβ
Trk
TrkA
TrkB
TrkC
VEGF
Others

AltStyle によって変換されたページ (->オリジナル) /