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60S ribosomal protein L9

From Wikipedia, the free encyclopedia
Protein found in humans
RPL9
Available structures
PDB Ortholog search: PDBe RCSB
List of PDB id codes

2CQL, 4UG0, 4V6X, 5AJ0, 3J92, 4UJC, 3J7P, 4UJE, 3J7Q, 3J7R, 4D67, 4UJD, 4V5Z, 4D5Y, 3J7O

Identifiers
Aliases RPL9 , L9, NPC-A-16, ribosomal protein L9
External IDsOMIM: 603686; MGI: 1298373; HomoloGene: 90855; GeneCards: RPL9; OMA:RPL9 - orthologs
Gene location (Human)
Chromosome 4 (human)
Chr. Chromosome 4 (human) [1]
Band 4p14Start39,452,587 bp [1]
End39,458,931 bp [1]
Gene location (Mouse)
Chromosome 5 (mouse)
Chr. Chromosome 5 (mouse)[2]
Band 5|5 C3.1Start65,545,707 bp [2]
End65,548,787 bp [2]
RNA expression pattern
Bgee
Human Mouse (ortholog)
  • left ovary

  • right ovary

  • gastric mucosa

  • Achilles tendon

  • right uterine tube

  • ganglionic eminence

  • lactiferous gland

  • corpus callosum

  • olfactory zone of nasal mucosa

  • gallbladder
  • dentate gyrus of hippocampal formation granule cell

  • ventricular zone

  • blastocyst

  • embryo

  • embryo

  • morula

  • lip

  • superior frontal gyrus

  • primary visual cortex

  • spermatocyte
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6133

20005

Ensembl

ENSG00000163682

ENSMUSG00000047215

UniProt

P32969

P51410

RefSeq (mRNA)

NM_000661
NM_001024921

NM_011292

RefSeq (protein)

NP_000652
NP_001020092

NP_035422

Location (UCSC)Chr 4: 39.45 – 39.46 Mb Chr 5: 65.55 – 65.55 Mb
PubMed search[3] [4]
Wikidata

60S ribosomal protein L9 is a protein that in humans is encoded by the RPL9 gene.[5] [6] [7]

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L6P family of ribosomal proteins. It is located in the cytoplasm. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. Two alternatively spliced transcript variants encoding the same protein have been found for this gene.[7]

References

[edit ]
  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000163682Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000047215Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Mazuruk K, Schoen TJ, Chader GJ, Iwata T, Rodriguez IR (Apr 1996). "Structural organization and chromosomal localization of the human ribosomal protein L9 gene". Biochim Biophys Acta. 1305 (3): 151–62. doi:10.1016/0167-4781(95)00201-4. PMID 8597601.
  6. ^ Hori N, Murakawa K, Matoba R, Fukushima A, Okubo K, Matsubara K (Nov 1993). "A new human ribosomal protein sequence, homologue of rat L9". Nucleic Acids Res. 21 (18): 4395. doi:10.1093/nar/21.18.4395. PMC 310081 . PMID 8415001.
  7. ^ a b "Entrez Gene: RPL9 ribosomal protein L9".

Further reading

[edit ]
[edit ]
  • PDBe-KB provides an overview of all the structure information available in the PDB for Human 60S ribosomal protein L9


PDB gallery
Proteins
Initiation factor
Bacterial
Mitochondrial
Archaeal
Eukaryotic
eIF1
eIF2
eIF3
eIF4
eIF5
eIF6
Elongation factor
Bacterial/Mitochondrial
Archaeal/Eukaryotic
Release factor
Ribosomal Proteins
Cytoplasmic
60S subunit
40S subunit
Mitochondrial
39S subunit
28S subunit
Other concepts
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