To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("STRINGdb")

In most cases, you don't need to download the package archive at all.

STRINGdb

STRINGdb (Search Tool for the Retrieval of Interacting proteins database)

Bioconductor version: Release (3.5)

The STRINGdb package provides a R interface to the STRING protein-protein interactions database (http://www.string-db.org).

Author: Andrea Franceschini <andrea.franceschini at isb-sib.ch>

Maintainer: Alexander Roth <alexander.roth at isb-sib.ch>

Citation (from within R, enter citation("STRINGdb")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("STRINGdb")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("STRINGdb")

PDF R Script STRINGdb Vignette

PDF Reference Manual

biocViews Network, Software

Version 1.16.0

In Bioconductor since BioC 2.13 (R-3.0) (4 years)

License GPL-2

Depends R (>= 2.14.0)

LinkingTo

SystemRequirements

Enhances

URL

Depends On Me PPInfer, scsR

Imports Me pwOmics, RITAN

Follow Installation instructions to use this package in your R session.

Windows Binary STRINGdb_1.16.0.zip

Mac OS X 10.11 (El Capitan) STRINGdb_1.16.0.tgz

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