To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GOstats")

In most cases, you don't need to download the package archive at all.

GOstats

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see GOstats.

Tools for manipulating GO and microarrays.

Bioconductor version: 3.4

A set of tools for interacting with GO and microarray data. A variety of basic manipulation tools for graphs, hypothesis testing and other simple calculations.

Author: R. Gentleman and S. Falcon

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("GOstats")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GOstats")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GOstats")

PDF R Script Hypergeometric tests for less common model organisms

PDF R Script Hypergeometric Tests Using GOstats

PDF R Script Visualizing Data Using GOstats

PDF Reference Manual

Details

biocViews Annotation, GO, GeneExpression, GeneSetEnrichment, GraphAndNetwork, Microarray, MultipleComparison, Pathways, Software

Version 2.40.0

In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 12 years)

License Artistic-2.0

Depends R (>= 2.10), Biobase(>= 1.15.29), Category(>= 2.3.26), graph

Imports methods, stats, stats4, AnnotationDbi(>= 0.0.89), Biobase(>= 1.15.29), Category(>= 2.3.26), GO.db(>= 1.13.0), RBGL, annotate(>= 1.13.2), graph(>= 1.15.15), AnnotationForge

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