DropletUtils

This is the released version of DropletUtils; for the devel version, see DropletUtils.

Utilities for Handling Single-Cell Droplet Data

Installation

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
BiocManager::install("DropletUtils")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DropletUtils")

Details

See More

Suggests testthat, knitr, BiocStyle, rmarkdown, jsonlite, DropletTestFiles

Linking To Rcpp, beachmat, assorthead, Rhdf5lib, BH, dqrng, scuttle

Enhances

Depends On Me OSCA.advanced, OSCA.intro, OSCA.multisample, OSCA.workflows

Imports Me DOtools, scCB2, scPipe, singleCellTK, SpaceTrooper, Spaniel, SpatialExperimentIO, SpatialFeatureExperiment, stPipe, visiumStitched, OSTA

Suggests Me alabaster.spatial, demuxmix, GEOquery, mumosa, Nebulosa, OSTA.data, SingleCellAlleleExperiment, SpatialExperiment, SPOTlight, SVP, tidySpatialExperiment, DropletTestFiles, MerfishData, muscData, spatialLIBD, scCustomize, SoupX

Links To Me

Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.