To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("cleaver")

In most cases, you don't need to download the package archive at all.

cleaver

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see cleaver.

Cleavage of Polypeptide Sequences

Bioconductor version: 3.2

In-silico cleavage of polypeptide sequences. The cleavage rules are taken from: http://web.expasy.org/peptide_cutter/peptidecutter_enzymes.html

Author: Sebastian Gibb [aut, cre]

Maintainer: Sebastian Gibb <mail at sebastiangibb.de>

Citation (from within R, enter citation("cleaver")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("cleaver")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("cleaver")
PDF in-silico cleavage of polypeptides
PDF Reference Manual
Text NEWS

Details

biocViews Proteomics, Software
Version 1.8.0
In Bioconductor since BioC 2.13 (R-3.0) (2.5 years)
License GPL (>= 3)
Depends R (>= 3.0.0), methods, Biostrings(>= 1.29.8)
Imports S4Vectors, IRanges
LinkingTo
Suggests testthat (>= 0.8), knitr, BiocStyle(>= 0.0.14), BRAIN, UniProt.ws(>= 2.1.4)
SystemRequirements
Enhances
URL https://github.com/sgibb/cleaver/
BugReports https://github.com/sgibb/cleaver/issues/
Depends On Me
Imports Me Pbase, synapter
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source cleaver_1.8.0.tar.gz
Windows Binary cleaver_1.8.0.zip
Mac OS X 10.6 (Snow Leopard) cleaver_1.8.0.tgz
Mac OS X 10.9 (Mavericks) cleaver_1.8.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/cleaver/tree/release-3.2
Package Short Url http://bioconductor.org/packages/cleaver/
Package Downloads Report Download Stats

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