* using log directory ‘/loc/home/biocbuild/bbs-2.10-data-experiment/meat/affydata.Rcheck’
* using R version 2.15.1 (2012年06月22日)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘affydata/DESCRIPTION’ ... OK
* this is package ‘affydata’ version ‘1.11.16’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘affydata’ can be installed ... OK
* checking installed package size ... NOTE
 installed size is 23.5Mb
 sub-directories of 1Mb or more:
 celfiles 16.2Mb
 data 4.4Mb
 extracelfiles 2.7Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... WARNING
Execution halted
A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.
Probably some imports need to be declared in the NAMESPACE file.
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
 
 Note: significantly better compression could be obtained
 by using R CMD build --resave-data
 old_size new_size compress
 Dilution.rda 4.4Mb 2.5Mb xz
* checking installed files from ‘inst/doc’ ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... NOTE
‘::’ or ‘:::’ import not declared from: ‘Biobase’
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK
WARNING: There were 2 warnings.
NOTE: There were 2 notes.
See
 ‘/loc/home/biocbuild/bbs-2.10-data-experiment/meat/affydata.Rcheck/00check.log’
for details.

* installing *source* package ‘affydata’ ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
 ‘affydata.Rnw’ 
** testing if installed package can be loaded
 Package 
[1,] "affydata"
 LibPath 
[1,] "/loc/home/biocbuild/bbs-2.10-data-experiment/meat/affydata.Rcheck"
 Item Title 
[1,] "Dilution" "AffyBatch instance Dilution"
* DONE (affydata)