CGD Paper


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Cote P, Hogues H, Whiteway M (2009) Transcriptional analysis of the Candida albicans cell cycle. Mol Biol Cell 20(14):3363-73
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Abstract:Monitoring Editor: Charles Boone We have examined the periodic expression of genes through the cell cycle in cultures of the human pathogenic fungus Candida albicans synchronized by mating pheromone treatment. Close to 500 genes show increased expression during the G1, S, G2 or M transitions of the C. albicans cell cycle. Comparisons of these C. albicans periodic genes with those already found in the budding and fission yeasts and in human cells reveals that of 2200 groups of homologous genes, close to 600 show periodicity in at least one organism but only 11 are periodic in all four species. Overall, the C. albicans regulatory circuit most closely resembles that of S. cerevisiae, but contains a simplified structure. Although the majority of the C. albicans periodically regulated genes have homologues in the budding yeast, 20% (100 genes), most of which peak during the G1/S or M/G1 transitions, are unique to the pathogenic yeast.
Status: Published Type: Journal Article PubMed ID: 19477921


Topics addressed in this paper
There are 111 different genes addressed in this paper.

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Topics
Genes linked to topics(#1-10)
ACE2
(C. albicans)
APC1
(C. albicans)
ASE1
(C. albicans)
ASH2
(C. albicans)
BRN1
(C. albicans)
CCN1
(C. albicans)
CDC14
(C. albicans)
CDC20
(C. albicans)
CDC27
(C. albicans)
CDC28
(C. albicans)
Alias







Candida albicans
DNA/RNA Sequence Features
Fungal Related Genes/Proteins
Genomic expression study
Non-Fungal Related Genes/Proteins
RNA Levels and Processing
Regulatory Role








Transcriptional Regulation

Topics
Genes linked to topics(#11-20)
CDC46
(C. albicans)
CDC5
(C. albicans)
CDC54
(C. albicans)
CDC6
(C. albicans)
CDC7
(C. albicans)
CDH1
(C. albicans)
CHS1
(C. albicans)
CHS3
(C. albicans)
CHS8
(C. albicans)
CHT3
(C. albicans)
Alias








Candida albicans
DNA/RNA Sequence Features
Fungal Related Genes/Proteins
Genomic expression study
Non-Fungal Related Genes/Proteins
RNA Levels and Processing
Transcriptional Regulation

Topics
Genes linked to topics(#21-30)
CKS1
(C. albicans)
CLB2
(C. albicans)
CLB4
(C. albicans)
CSE4
(C. albicans)
CTF18
(C. albicans)
DBF2
(C. albicans)
DBF4
(C. albicans)
DCC1
(C. albicans)
DSE1
(C. albicans)
DUN1
(C. albicans)
Alias







Candida albicans
DNA/RNA Sequence Features
Fungal Related Genes/Proteins
Genomic expression study
Non-Fungal Related Genes/Proteins
RNA Levels and Processing
Transcriptional Regulation
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Topics
Genes linked to topics(#31-40)
ENG1
(C. albicans)
ESP1
(C. albicans)
EXO1
(C. albicans)
FAR1
(C. albicans)
FKH2
(C. albicans)
GIN1
(C. albicans)
HGC1
(C. albicans)
HOF1
(C. albicans)
HSL1
(C. albicans)
HYS2
(C. albicans)
Alias







Candida albicans
DNA/RNA Sequence Features
Fungal Related Genes/Proteins
Genomic expression study
Mutants/Phenotypes








Non-Fungal Related Genes/Proteins
RNA Levels and Processing
Regulatory Role








Techniques and Reagents








Transcriptional Regulation

Topics
Genes linked to topics(#41-50)
INN1
(C. albicans)
IRR1
(C. albicans)
KEL1
(C. albicans)
KIP2
(C. albicans)
MBP1
(C. albicans)
MCM1
(C. albicans)
MCM2
(C. albicans)
MCM3
(C. albicans)
MCM6
(C. albicans)
MEC1
(C. albicans)
Alias






Candida albicans
DNA/RNA Sequence Features
Fungal Related Genes/Proteins
Genomic expression study
Non-Fungal Related Genes/Proteins
RNA Levels and Processing
Regulatory Role







Transcriptional Regulation

Topics
Genes linked to topics(#51-60)
MLH1
(C. albicans)
MMS21
(C. albicans)
MMS22
(C. albicans)
MOB1
(C. albicans)
MPS1
(C. albicans)
MSH2
(C. albicans)
MSH6
(C. albicans)
NCE4
(C. albicans)
PCL2
(C. albicans)
PDS5
(C. albicans)
Alias





Candida albicans
DNA/RNA Sequence Features
Fungal Related Genes/Proteins
Genomic expression study
Non-Fungal Related Genes/Proteins
RNA Levels and Processing
Transcriptional Regulation
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Topics
Genes linked to topics(#61-70)
PIR1
(C. albicans)
PMS1
(C. albicans)
POL1
(C. albicans)
POL2
(C. albicans)
POL3
(C. albicans)
POL30
(C. albicans)
POL32
(C. albicans)
PSF1
(C. albicans)
PSF2
(C. albicans)
PSF3
(C. albicans)
Alias




Candida albicans
DNA/RNA Sequence Features
Fungal Related Genes/Proteins
Genomic expression study
Non-Fungal Related Genes/Proteins
RNA Levels and Processing
Transcriptional Regulation

Topics
Genes linked to topics(#71-80)
RAD53
(C. albicans)
RFA1
(C. albicans)
RFA2
(C. albicans)
RFC1
(C. albicans)
RFC2
(C. albicans)
RFC3
(C. albicans)
RFC4
(C. albicans)
RFC5
(C. albicans)
RFC52
(C. albicans)
RNR1
(C. albicans)
Alias







Candida albicans
DNA/RNA Sequence Features
Fungal Related Genes/Proteins
Genomic expression study
Non-Fungal Related Genes/Proteins
RNA Levels and Processing
Transcriptional Regulation

Topics
Genes linked to topics(#81-90)
RNR21
(C. albicans)
RNR22
(C. albicans)
RNR3
(C. albicans)
SCW11
(C. albicans)
SCW4
(C. albicans)
SDC1
(C. albicans)
SET1
(C. albicans)
SGO1
(C. albicans)
SLD5
(C. albicans)
SMC1
(C. albicans)
Alias




Candida albicans
DNA/RNA Sequence Features
Fungal Related Genes/Proteins
Genomic expression study
Non-Fungal Related Genes/Proteins
RNA Levels and Processing
Transcriptional Regulation
Jump to Summary Chart for:
  • To find other papers on a gene and topic, click on the colored ball in the appropriate box.
    displays other papers with information about that topic for that gene.
    displays other papers in CGD that are associated with that topic.
    The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.

  • To go to the Locus page for a gene, click on the gene name.

Topics
Genes linked to topics(#91-100)
SMC2
(C. albicans)
SMC3
(C. albicans)
SMC4
(C. albicans)
SMC5
(C. albicans)
SMC6
(C. albicans)
SOH1
(C. albicans)
SOL1
(C. albicans)
SPC98
(C. albicans)
SPP1
(C. albicans)
SWD1
(C. albicans)
Alias


Candida albicans
DNA/RNA Sequence Features
Fungal Related Genes/Proteins
Genomic expression study
Non-Fungal Related Genes/Proteins
RNA Levels and Processing
Transcriptional Regulation

Topics
Genes linked to topics(#101-110)
SWD2
(C. albicans)
SWD3
(C. albicans)
SWE1
(C. albicans)
SWI4
(C. albicans)
SWI6
(C. albicans)
TUB2
(C. albicans)
TUB4
(C. albicans)
UAP1
(C. albicans)
YCG1
(C. albicans)
YCS4
(C. albicans)
Alias




Candida albicans
DNA/RNA Sequence Features
Fungal Related Genes/Proteins
Genomic expression study
Non-Fungal Related Genes/Proteins
RNA Levels and Processing
Regulatory Role







Transcriptional Regulation

Topics
Genes linked to topics(#111)
YOX1
(C. albicans)
Candida albicans
DNA/RNA Sequence Features
Fungal Related Genes/Proteins
Genomic expression study
Non-Fungal Related Genes/Proteins
RNA Levels and Processing
Transcriptional Regulation
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