Reactome Pathway Database

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Reactome Pathway Database

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Graph Database :: Data Schema

Graph Database :: Data Schema

DatabaseObject
- AbstractModifiedResidue [54932]
  - GeneticallyModifiedResidue [5685]
    - FragmentModification [2487]
    - ReplacedResidue [3198]
      - NonsenseMutation [1309]
  - TranscriptionalModification [70]
    - ModifiedNucleotide [70]
  - TranslationalModification [49177]
    - CrosslinkedResidue [1182]
      - InterChainCrosslinkedResidue [780]
      - IntraChainCrosslinkedResidue [402]
    - GroupModifiedResidue [12741]
    - ModifiedResidue [35254]
- Affiliation [347]
- CatalystActivity [39837]
- ControlReference [3335]
  - CatalystActivityReference [1098]
  - MarkerReference [367]
  - RegulationReference [1870]
- ControlledVocabulary [21]
  - DeletedControlledVocabulary [7]
  - NegativePrecedingEventReason [6]
  - ReactionType [3]
    - DrugActionType [3]
  - ReviewStatus [5]
- DatabaseIdentifier [822451]
- EntityFunctionalStatus [690]
- Event [116830]
  - Pathway [23158]
    - CellLineagePath [12]
    - TopLevelPathway [417]
  - ReactionLikeEvent [93672]
    - BlackBoxEvent [10260]
    - CellDevelopmentStep [22]
    - Depolymerisation [28]
    - FailedReaction [449]
    - Polymerisation [239]
    - Reaction [82674]
- ExternalOntology [996]
  - Anatomy [14]
  - CellType [31]
  - Disease [759]
  - EvidenceType [3]
  - PsiMod [174]
  - SequenceOntology [15]
- Figure [881]
- FunctionalStatus [27]
- FunctionalStatusType [5]
- GO_Term [3168]
  - GO_BiologicalProcess [1057]
  - GO_CellularComponent [452]
    - Compartment [156]
  - GO_MolecularFunction [1659]
- InstanceEdit [155479]
- Interaction [76984]
  - UndirectedInteraction [76984]
- MetaDatabaseObject [78652]
  - Deleted [7623]
  - DeletedInstance [10522]
  - Release [141]
    - DBInfo [1]
  - UpdateTracker [60366]
- NegativePrecedingEvent [987]
- Person [168937]
- PhysicalEntity [404782]
  - Cell [25]
  - Complex [108645]
  - Drug [1184]
    - ChemicalDrug [1087]
    - ProteinDrug [95]
    - RNADrug [2]
  - EntitySet [44541]
    - CandidateSet [8952]
    - DefinedSet [35589]
  - GenomeEncodedEntity [244629]
    - EntityWithAccessionedSequence [237578]
  - OtherEntity [347]
  - Polymer [1536]
  - SimpleEntity [3875]
- Publication [41560]
  - Book [133]
  - LiteratureReference [41373]
  - URL [54]
- ReferenceDatabase [104]
- ReferenceEntity [898641]
  - ReferenceGroup [137]
  - ReferenceMolecule [2176]
  - ReferenceSequence [895256]
    - ReferenceDNASequence [596106]
    - ReferenceGeneProduct [103178]
      - ReferenceIsoform [2342]
    - ReferenceRNASequence [195972]
  - ReferenceTherapeutic [1072]
- Regulation [7548]
  - NegativeRegulation [3116]
    - NegativeGeneExpressionRegulation [328]

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