liver-segmentation

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assassint2017 / MICCAI-LITS2017

Star 426

liver segmentation using deep learning

deep-learning pytorch liver-segmentation fully-convolutional-networks medical-image-processing

Updated Jul 6, 2023
Python

IBBM / Cascaded-FCN

Star 304

Source code for the MICCAI 2016 Paper "Automatic Liver and Lesion Segmentation in CT Using Cascaded Fully Convolutional NeuralNetworks and 3D Conditional Random Fields"

deep-neural-networks caffe deep-learning medical-imaging segmentation semantic-segmentation liver-segmentation 3d-crf fully-convolutional-networks

Updated Dec 27, 2017
Jupyter Notebook

Confusezius / unet-lits-2d-pipeline

Star 99

Liver Lesion Segmentation with 2D Unets

deep-learning unet semantic-segmentation liver-segmentation medical-image-segmentation unet-pytorch lesion-segmentation

Updated Jul 4, 2019
Python

livermask

andreped / livermask

Star 70

💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model

deep-learning open segmentation command-line-tool pretrained-models unet liver-segmentation ct liver free-to-use vessels livermask parenchyma liver-vessels hepatic-veins portal-veins

Updated Oct 7, 2024
Python

mohamed-ezz / saratan

Star 39

Code for MICCAI 2016 paper : Automatic liver and lesions segmentation using Cascaded Fully Convolutional Neural Networks and 3D Conditional Random Fields

deep-learning medical-imaging segmentation semantic-segmentation liver-segmentation

Updated Jan 24, 2020
Python

segmentation-eval

rmsandu / segmentation-eval

Star 28

Extract and evaluate radiomics for liver cancer tumors from DICOM segmentation masks. Using SimpleITK, PyRadiomics and PyDicom.

metrics dicom tumor segmentation simpleitk data-preparation liver-segmentation pydicom euclidean-distances pyradiomics ablation segmentation-masks radiomics-feature-extraction liver-cancer segmentation-eval liver-tumor radiomics-extraction

Updated Aug 22, 2025
Python

NUBagciLab / CirrMRI600Plus

Star 19

CirrMRI600+: Large Scale MRI Collection and Segmentation of Cirrhotic Liver

mri datasets liver-segmentation computer-aided-diagnosis liver liver-disease t1-weighted-mri liver-cirrhosis t2-weighted-mri

Updated May 7, 2025
Python

DebeshJha / CirrMRI600PLUS

Star 13

CirrMRI600+: Large Scale MRI Collection and Segmentation of Cirrhotic Liver

liver-segmentation 3d-segmentation liver-disease liver-cancer liver-disease-prediction abdominal-organ-segmentation abdominal-organ-dataset abdominal-organ liver-cirrhosis t2-weighted-mri cirrhotic-liver-segmentation abdominal-mri-dataset liver-disease-diagnosis abdomen-mri

Updated Oct 25, 2024

fshnkarimi / 3D-Liver-Segmentation

Star 12

Automatically segment the liver and liver tumors in CT scans with 3D-UNET

python pytorch medical-imaging unet liver-segmentation medical-image-analysis 3d-unet torchio

Updated Jun 8, 2022
Jupyter Notebook

joocxi / tf-FCN

Star 8

Fully Convolutional Networks for Liver Segmentation in TensorFlow

computer-vision tensorflow liver-segmentation fully-convolutional-networks

Updated Mar 24, 2023
Python

TheAlphaJas / Liver-Tumor-Seg-Implements

Star 6

This repository contains codes of various state-of-the-art methods and research papers for Liver Tumor Segmentation

machine-learning deep-learning artificial-intelligence medical-imaging convolutional-neural-networks liver-segmentation tumor-segmentation liver-tumor

Updated May 23, 2024
Jupyter Notebook

TheAlphaJas / HiFormer-LITS

Star 4

Implementation of the LITS dataset on HiFormer architecture

machine-learning deep-learning transformer liver-segmentation medical-image-segmentation tumor-segmentation wacv2023

Updated Jun 13, 2024
Python

mrshamshir / 3D-Liver-Segmentation

Star 4

Automatic segmentation of the liver and liver tumors in CT scans with 3D U-Net.

python pytorch medical-imaging unet liver-segmentation medical-image-processing 3d-unet torchio

Updated Oct 7, 2023
Jupyter Notebook

assassint2017 / organ-segmetation-display

Star 3

organ segmemtation display using vtk7

segmentation vtk liver-segmentation organ-segmetation

Updated Aug 16, 2019
C++

twpkevin06222 / Liver_Segmentation_Project

Star 3

Liver image segmentation with deep learning methods using U-Net.

deep-learning tensorflow keras liver-segmentation unet-image-segmentation

Updated Jan 18, 2019
Jupyter Notebook

Multiclass-U-Net-for-liver-tumor-segmentation

Skygers / Multiclass-U-Net-for-liver-tumor-segmentation

Star 3

Liver Tumor Detection using Multiclass Semantic Segmentation with U-Net Model Architecture. CT-Scan images processed with Window Leveling and Window Blending Method, also CT-Scan Mask processed with One Hot Semantic Segmentation (OHESS)

cv2 semantic-segmentation liver-segmentation pyhton3 one-hot tumor-segmentation tensorflow2 one-hot-encoding multiclass-segmentation

Updated Feb 1, 2024
Jupyter Notebook

cubicle-SK / liver-segmentation-and-volumetric-analysis

Star 2

dicom python3 dicom-images liver-segmentation

Updated Sep 19, 2020
Jupyter Notebook

chautruonglong / Applying-CNN-in-determining-cancer-cells-from-CT-scans

Star 2

Liver cancer is one of the most dangerous diseases and is one of causes leading of death. The application of science and technology in the diagnosis and identification of cancerous tissues of the liver plays a very important role. This assists the doctor in planning and treating the patient. In this paper, we study the application of convolution...

cnn segmentation convolutional-neural-networks liver-segmentation ct-images cancer-cells liver-cancer