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Fix: tolerate spaces in <code>$NXF_TASK_WORKDIR</code>

software/bash

Status: Open (in progress).

nextflow-io/nextflownumber 6421

#6421 In nextflow-io/nextflow;

· TheLostLambda opened on Sep 23, 2025

Support running nextflow script in cygwin

software/bash

Status: Open (in progress).

nextflow-io/nextflownumber 6367

#6367 In nextflow-io/nextflow;

· markwoon opened on Aug 27, 2025

Eval outputs not captured if process exits early

lang/processes

software/bash

Status: Open.

#6315 In nextflow-io/nextflow;

· OlivierCoen opened on Jul 29, 2025

Make Bash path configurable

software/bash

Status: Draft (not ready).

nextflow-io/nextflownumber 5696

#5696 In nextflow-io/nextflow;

· pditommaso opened on Jan 22, 2025

Improve docs and rationale about exit logic in Bash unstage function

software/bash

stale

Status: Open.

#5556 In nextflow-io/nextflow;

· pditommaso opened on Dec 2, 2024

feature request: Make "/bin/bash" configurable

software/bash

stale

Status: Open.

#5420 In nextflow-io/nextflow;

· stianlagstad opened on Oct 22, 2024

Fix unescaped spaces and parentheses in container env script

software/bash

Status: Draft (not ready).

nextflow-io/nextflownumber 5193

#5193 In nextflow-io/nextflow;

· bentsherman opened on Aug 1, 2024

Error in nxf_kill

software/bash

stale

Status: Open.

#5078 In nextflow-io/nextflow;

· olivierlabayle opened on Jun 19, 2024

symlinks for staged files in directories are not removed in .command.run

software/bash

stale

Status: Open.

#4971 In nextflow-io/nextflow;

· nick-youngblut opened on May 3, 2024

Improvement in Spack implementation - shell commands

software/bash

stale

Status: Open.

#4054 In nextflow-io/nextflow;

· marcodelapierre opened on Jun 27, 2023

[Bugfix] Fix broken symlinks with scratch and move

software/bash

Status: Open (in progress).

nextflow-io/nextflownumber 2478

#2478 In nextflow-io/nextflow;

· Lehmann-Fabian opened on Dec 3, 2021