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org.biojava.ontology

Class OntoTools



  • public final class OntoTools
    extends Object 
    Tools for manipulating ontologies.
    Author:
    Matthew Pocock
    • Method Detail

      • getCoreOntology

        public static Ontology getCoreOntology()
        Get the Ontology that defines our core "central dogma".

        This contains definitions that we have to have, such as any, predicate, is-a and transient. These are our axioms, upon which the default interpreters build.

        Returns:
        the "core" Ontology
      • getIntegerOntology

        public static IntegerOntology getIntegerOntology()
        Get the Ontology that defines integers.

        This contains a term for each and every integer. I haven't decided yet if it contains terms for arithmatic.

        Returns:
        the integer Ontology
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