dStruct

This is the development version of dStruct; for the stable release version, see dStruct.

Identifying differentially reactive regions from RNA structurome profiling data

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DOI: 10.18129/B9.bioc.dStruct

Bioconductor version: Development (3.23)

dStruct identifies differentially reactive regions from RNA structurome profiling data. dStruct is compatible with a broad range of structurome profiling technologies, e.g., SHAPE-MaP, DMS-MaPseq, Structure-Seq, SHAPE-Seq, etc. See Choudhary et al., Genome Biology, 2019 for the underlying method.

Author: Krishna Choudhary [aut, cre] ORCID iD ORCID: 0000-0002-7966-1527 , Sharon Aviran [aut] ORCID iD ORCID: 0000-0003-1872-9820

Maintainer: Krishna Choudhary <kchoudhary at ucdavis.edu>

Citation (from within R, enter citation("dStruct")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("dStruct")

For older versions of R, please refer to the appropriate Bioconductor release.