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Nebulosa
This is the development version of Nebulosa; for the stable release version, see Nebulosa.
Single-Cell Data Visualisation Using Kernel Gene-Weighted Density Estimation
Bioconductor version: Development (3.23)
This package provides a enhanced visualization of single-cell data based on gene-weighted density estimation. Nebulosa recovers the signal from dropped-out features and allows the inspection of the joint expression from multiple features (e.g. genes). Seurat and SingleCellExperiment objects can be used within Nebulosa.
Author: Jose Alquicira-Hernandez [aut, cre] ORCID iD ORCID: 0000-0002-9049-7780
Maintainer: Jose Alquicira-Hernandez <alquicirajose at gmail.com>
citation("Nebulosa")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("Nebulosa")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Nebulosa")
Details
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Package Archives
Follow Installation instructions to use this package in your R session.