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Hannes Hauswedell edited this page Jul 21, 2024
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This page contains links to databases that are pre-formatted for use with Lambda (so that you don't have to index them yourself). If you have created indexes yourself and would like to share them, you can send us a link.
lambda3 branch
Unpacking the file after download is not required; you can use it as-is. However, unzipped files may load slightly faster during search (this depends on disk vs CPU speed).
Taxonomy information is included in some indexes, see Taxonomic Workflows for more information.
Memory usage during search is usually Unpacked Size + size-of-query-file ± 10%. The memory usage during the creation of the indexes was higher, around 10x input size.
Unpack the file after download with tar xf FILE.lambda.tar.gz. The resulting .lambda directory is the index.
Taxonomy information is included in some of the indexes, see Taxonomic Workflows for more information.
Memory usage during search is usually Unpacked Size + size-of-query-file ± 10%. The memory usage during the creation of the indexes was higher, around 2.5 * Unpacked Size.