NeXML format
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File format for phylogenetics data
For XML tools for NeXus format used in neutron, x-ray, and muon scattering, see Nexus (data format).
| NeXML | |
|---|---|
| Filename extensions | .nexml |
| Internet media type | text/x-nexml+xml |
| Developed by | Rutger A. Vos, et al. |
| Initial release | 1 July 2012 (13 years ago) (2012年07月01日) |
| Type of format | bioinformatics |
| Extended from | XML |
| Open format? | Yes |
| Website | nexml |
NeXML is an exchange standard for representing phyloinformatic data.[1] It was inspired by the widely used Nexus file format but uses XML to produce a more robust format for rich phylogenetic data. Advantages include syntax validation, semantic annotation, and web services. The format is broadly supported and has libraries in many popular programming languages for bioinformatics.
External links
[edit ]References
[edit ]- ^ Vos, Rutger A.; Balhoff, James P.; Caravas, Jason A.; Holder, Mark T.; Lapp, Hilmar; Maddison, Wayne P.; Midford, Peter E.; Priyam, Anurag; Sukumaran, Jeet (2012年07月01日). "NeXML: Rich, Extensible, and Verifiable Representation of Comparative Data and Metadata". Systematic Biology. 61 (4): 675–689. doi:10.1093/sysbio/sys025. ISSN 1063-5157. PMC 3376374 . PMID 22357728.
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