Module:Biota infobox

 require('strict')
 -- All Lua modules on Wikipedia must begin by defining a variable that will hold their
 -- externally accessible functions. They can have any name and may also hold data.
 localp={}-- exposed variables
 localg={}-- these are variables with global scope in this module

 localinfo={}-- contains general purpose information (e.g. header background colour)
 info.debug=false-- ONLY SET THIS WHILE TESTING

 --local paramData = require( 'Module:Sandbox/Jts1882/Biota Infobox/data' ) -- contains the taxon ranks in order
 --local autotaxa = require("Module:Sandbox/Jts1882/Biota Infobox/Autotaxobox")
 --local autotaxa = require("Module:Autotaxobox")
 localparameters=require('Module:Biota infobox/param')
 localcore=require('Module:Biota infobox/core')

 -- ######################### PARAMETER HANDLING ############################

 localtemplateArgs={}-- contains preprocessed arguments from calling template
 --TODO use info.args instead of templateArgs?


 -- ########################### MAIN AND OTHER ENTRY FUNCTIONS ##################################

 --[[ main function callable in Wikipedia via the #invoke command.
  creates a taxobox-style infobox
  handles preliminary parameter handling enulating taxobox and automatic taxobox templates
  -- the parameters are also checked for content, alias, valid names and valid combinations
  -- the parameter handling is in subpage Module:Sandbox/Jts1882/Biota Infobox/param
  these are passed the core function
  -- the core function emulates the template {{Taxobox/core})
  -- the function is found in subpage Module:Sandbox/Jts1882/Biota Infobox/core
  -- the core them creates the taxobox
  creates main table and header section (with header, subheader and fossil ranges)
 	 adds addition rows for template arguments with following subsidiary functions:
 			 p.addImageSection() - images and range maps 
 			 p.addStatusSection() - conservation status
 			 p.addTaxonomySection() - listing of taxonomic heirarchy (manuel or using automatic taxonomy system)
 			 p.addTaxonSection() - adds section with taxonomic information (binomial or trinomials; type genus or species; diversity)
 			 p.addListSection() - section containing list if subdivisions, synonyms, included or excluded groups
 --]]
 p.main=function(frame)

 --p.getArgs(frame)
 parameters.getArgs(frame,templateArgs,info)-- gets arguments, checks for value, aliases, and against valid parameter list

 ifinfo.autothen
 p.AutomaticTaxoboxOptions(frame)-- this emulates the automatic taxobox templates that feed the core
 else
 --[[TODO manual taxobox options:
 		 name or use Template:Taxonomy name |genus|species|binomial name
 		 colour = p.getTaxoboxColor(frame)
 		]]
 end

 --return p._core(frame)
 returncore.core(frame,templateArgs,info)
 end

 -- this functions emulates Template:automatic taxobox and uses Template:Taxobox/core
 p.auto=function(frame)
 --info.auto = frame.args.auto or "automatictaxobox"

 p.getArgs(frame)-- gets arguments, checks for value, aliases, and against valid parameter list

 ifinfo.autothen
 p.AutomaticTaxoboxOptions(frame)-- this emulates the automatic taxobox templates that feed the core
 end

 -- additional parameters needed by Template:Taxobox/core
 templateArgs['edit link']="edit taxonomy"
 templateArgs['colour']=p.getTaxoboxColor(frame)
 templateArgs['upright']=templateArgs['image_upright']or1
 templateArgs['upright2']=templateArgs['image2_upright']or1

 -- use Template:Taxobox/core
 returntostring(frame:expandTemplate{title='taxobox/core',args=templateArgs})

 end

 --[[ ##################### CORE FUNCTIONS ###################################

  this core function emulates Template:Taxobox/core 
  it is followed by functions handling the different type of entry
  MOVED to subpage Module:Sandbox/Jts1882/Biota_Infobox/core
 ]]


 -- ################## AUTOMATIC TAXOBOX SYSTEM HANDLING ################################
 ------------------------------------------------------------------------------------------------
 -- handle specific requirements of different options: auto, speciesbox etc
 functionp.AutomaticTaxoboxOptions(frame)

 --TODO replace genus with first word (genus) to strip parenthetic term
 -- done in speciesbox?


 templateArgs['display_taxa']=templateArgs['display_parents']or1-- note change of parameter name 

 localextinct=""
 iftemplateArgs['extinct']ortemplateArgs['status']=="EX"then
 --extinct = "†"
 extinct=frame:expandTemplate{title='extinct'}-- use template to get tooltip
 -- speciesbox also checks the genus taxonomy template for extinct parameter
 end

 ---------------------variables for SPECIESBOX, SUBSPECIESBOX and INFRASPECIESBOX---------------------
 ifinfo.auto=="hybridbox"then

 --templateArgs['parent'] = templateArgs['parent'] or templateArgs['genus'] or templateArgs['genus1']

 localspecies1=templateArgs['species']ortemplateArgs['species1']ortemplateArgs['father']ortemplateArgs['father_species']or""
 localspecies2=templateArgs['species2']ortemplateArgs['mother']ortemplateArgs['mother_species']ortemplateArgs['species']or""
 localgenus1=templateArgs['genus']ortemplateArgs['genus1']ortemplateArgs['father_genus']-- TODO use page
 localgenus2=templateArgs['genus2']ortemplateArgs['mother_genus']ortemplateArgs['genus']
 localspecies3=templateArgs['species3']or""
 localgenus3=templateArgs['genus3']ortemplateArgs['genus']or""

 localsubspecies1,subspecies2,subspecies3="","",""
 --if (templateArgs['subspecies1'] and templateArgs['subspecies2'])
 iftemplateArgs['subspecies1']ortemplateArgs['subspecies2']
 or(templateArgs['father_subspecies']andtemplateArgs['mother_subspecies'])then
 subspecies1=" "..((templateArgs['subspecies1']ortemplateArgs['father_subspecies'])or"")
 subspecies2=" "..((templateArgs['subspecies2']ortemplateArgs['mother_subspecies'])or"")
 iftemplateArgs['subspecies3']then
 subspecies3=" "..templateArgs['subspecies3']
 species3=species1
 end
 end

 locallink1=templateArgs['link1']ortemplateArgs['father_link']or(genus1.." "..species1..subspecies1)
 locallink2=templateArgs['link2']ortemplateArgs['mother_link']or(genus2.." "..species2..subspecies2)
 locallink3=templateArgs['link3']or(genus3.." "..species3..subspecies3)

 ifnottemplateArgs['parent']thentemplateArgs['parent']=genus1end


 --TODO disambiguate genus pages -- not needed unless using page name
 --genus1 = frame:expandTemplate{ title = 'Speciesbox/getGenus' , args = {"", genus1 } }
 --	genus2 = frame:expandTemplate{ title = 'Speciesbox/getGenus' , args = {"", genus2 } }

 ifnottemplateArgs['genus2']andnottemplateArgs['father_genus']then
 genus1=string.sub(genus1,1,1).."."-- shorten generic names for intrageneric hybrids
 genus2=string.sub(genus2,1,1).."."
 genus3=string.sub(genus3,1,1).."."
 end

 -- shorten species name if subspecies of same species
 ifsubspecies1~=""andnottemplateArgs['species2']then
 species1=string.sub(species1,1,1).."."-- shorten specific epithet for intraspecific hybrids
 species2=string.sub(species2,1,1).."."
 ifsubspecies3~=""thenspecies3=string.sub(species3,1,1).."."end
 end

 localmaleSymbol,femaleSymbol="",""
 iftemplateArgs['father']ortemplateArgs['father_genus']ortemplateArgs['father_species']ortemplateArgs['father_subspecies']thenmaleSymbol="♂"end
 iftemplateArgs['mother']ortemplateArgs['mother_genus']ortemplateArgs['mother_species']ortemplateArgs['mother_subspecies']thenfemaleSymbol="♀"end

 templateArgs['hybrid']="'''''[["..link1.."|"..genus1.." "..species1..subspecies1.."]]'''''"..maleSymbol
 .." ×ばつ "
 .."'''''[["..link2.."|"..genus2.." "..species2..subspecies2.."]]'''''"..femaleSymbol

 ifspecies3~=""then
 templateArgs['hybrid']=templateArgs['hybrid'].." ×ばつ "
 .."'''''[["..link3.."|"..genus3.." "..species3..subspecies3.."]]'''''"
 end

 --templateArgs['hybrid species'] = templateArgs['hybrid']
 ifsubspecies1~=""andnottemplateArgs['species2']then
 templateArgs['species']="''[["..templateArgs['genus'].." "..templateArgs['species'].."|"
 ..genus1.." "..templateArgs['species'].."]]''"
 elsetemplateArgs['species']=nil
 end
 templateArgs['offset']=1

 -- ======================= setup for SPECIESBOX =============================

 elseifinfo.auto=="speciesbox"then-- code to emulate SPECIESBOX

 --[[ {{speciesbox}} gets genus and species from taxon, genus+species or page name
  1. uses 'taxon' paramter ( given as binomial) if available
  2. otherwise uses 'genus' and 'species' parameters
  3. uses page name
  the genus is used for the 'parent' taxon 
  	unless the parent is supplied (e.g. for subgenus)

  This logic is handled using {{Speciesbox/getGenus}}, {{Speciesbox/getSpecies}} and {{Speciesbox/trim}}
  code doing similar is in an older version of this page
  --]]

 localgenus,species="",""
 genus=frame:expandTemplate{title='Speciesbox/getGenus',-- get genus from taxon or genus parameter
 args={templateArgs['taxon'],templateArgs['genus']}
 }
 genus=frame:expandTemplate{title='Speciesbox/trim',-- remove disambiguation
 args={genus}
 }
 species=frame:expandTemplate{title='Speciesbox/getSpecies',-- get species from taxon or species parameter
 args={templateArgs['taxon'],templateArgs['species']}
 }

 ifnottemplateArgs['parent']ortemplateArgs['parent']==""then
 templateArgs['parent']=templateArgs['genus']orgenus-- set parent to genus (with disambiguation if given)
 end

 templateArgs['genus']=genus-- set to genus without diambiguation
 templateArgs['species']=species
 templateArgs['taxon']=genus..' '..species

 templateArgs['name']=frame:expandTemplate{title='Speciesbox/name',-- set the page name
 args={templateArgs['name'],
 templateArgs['taxon'],templateArgs['genus'],templateArgs['species'],
 --mw.title.getCurrentTitle().baseText, -- =BASEPAGENAME (magic word for parent page)
 frame:expandTemplate{title='PAGENAMEBASE'},-- page name without parenthetic term
 templateArgs['italic_title'or'yes']
 }
 }

 templateArgs['binomial']="''"..templateArgs['taxon'].."''"
 templateArgs['binomial_authority']=templateArgs['authority']ornil

 -- set species_name e.g. Panthera leo -> P. leo
 templateArgs['species_name']=extinct.."'''''"..string.sub(templateArgs['genus'],1,1)..'. '..templateArgs['species'].."'''''"
 templateArgs['species']=templateArgs['species_name']

 templateArgs['display_taxa']=templateArgs['display_taxa']-1
 templateArgs['offset']=1
 iftemplateArgs['subgenus']andtemplateArgs['subgenus']~=""then
 templateArgs['offset']=templateArgs['offset']+1
 templateArgs['subgenus_authority']=templateArgs['parent_authority']or""
 end

 templateArgs['taxon']=nil-- For auto module


 -- ===================== set-up for SUBSPECIESBOX or INTRASPECIESBOX =================

 elseifinfo.auto=="subspeciesbox"orinfo.auto=="infraspeciesbox"then

 --[[ From template description:
 	 "The genus name, species name and subspecies name" 
 	 [or "genus name, specific epithet and infraspecific epithet"] 
  "
  must be supplied separately: the combined taxon parameter cannot be used.""
  "The genus name is then the entry into the taxonomic hierarchy.""

 		 The trinomial name is set from these parameters and the parameter ignored.
 		 --NOTE no infraspeciebox is currently using trinomial parameter
  --]]

 -- Parameter checking. This could be here or moved to parameter checking function
 iftemplateArgs['genus']andtemplateArgs['species']andtemplateArgs['subspecies']then
 -- valid parameters for subspecies (may have variety as well)
 elseiftemplateArgs['genus']andtemplateArgs['species']andtemplateArgs['variety']then
 -- valid parameters for infraspecies (variety without subspecies)
 else
 -- insufficient parameters
 -- TODO add error message and return
 end
 localoffset=2-- authority offset when subspecies OR variety 

 --TODO strip genus of disambiguator (need to check this works)
 localgenus=mw.text.split(templateArgs['genus']," ",true)
 ifgenus[1]~=""then
 templateArgs['genus']=genus[1]
 end
 templateArgs['parent']=templateArgs['genus']-- genus must be supplied

 -- handle parent species name
 localfullName=templateArgs['genus']..' '..templateArgs['species']
 localshortName=string.sub(templateArgs['genus'],1,1)..'. '..templateArgs['species']
 iftemplateArgs['species_link']then
 templateArgs['species_name']="''[["..templateArgs['species_link']..'|'..shortName.."]]''"
 else
 templateArgs['species_name']="''[["..fullName..'|'..shortName.."]]''"
 end
 iftemplateArgs['species_extinct']then
 extinct=frame:expandTemplate{title='extinct'}-- if parent species extinct, all children will be
 templateArgs['species_name']=extinct..templateArgs['species_name']
 end

 -- handle subspecies name (if set; varieties may not have a subspecies)
 localseparator=" "-- subspecies separator (default zoological)
 localabbr_subspecies_name

 iftemplateArgs['subspecies']then-- might not be subspecies if variety 
 ifinfo.auto=="infraspeciesbox"then
 separator=" ''subsp.'' "-- separator for plants etc
 end
 -- set abbreviated name, full name, and trinomial 
 abbr_subspecies_name=string.sub(templateArgs['genus'],1,1)..'. '
 ..string.sub(templateArgs['species'],1,1)..'.'
 ..separator..templateArgs['subspecies']
 fullName=templateArgs['genus']..' '..templateArgs['species']..separator..templateArgs['subspecies']
 templateArgs['trinomial']=extinct.."''"..fullName.."''"
 --templateArgs['subspecies_authority'] = templateArgs['authority'] -- replicates authoity in trinomial (unwanted?)

 templateArgs['subspecies_name']=extinct.."'''''"..abbr_subspecies_name.."'''''"
 end

 -- handle population (of a species or subspecies)
 iftemplateArgs['population']then
 iftemplateArgs['subspecies']then-- link subspecies name when using population
 iftemplateArgs['subspecies_link']then
 templateArgs['subspecies_name']="''[["..templateArgs['subspecies_link'].."|"..abbr_subspecies_name.."]]''"
 else
 templateArgs['subspecies_name']="''[["..fullName.."|"..abbr_subspecies_name.."]]''"
 end
 end
 ifnottemplateArgs['name']then
 templateArgs['name']=templateArgs['population']-- set taxobox name to population
 end
 iftemplateArgs['population_rank_name']andtemplateArgs['population_rank_abbrev']then
 templateArgs['trinomial']=templateArgs['trinomial']..' '..templateArgs['population_rank_abbrev']
 ..' '..templateArgs['population']
 else
 templateArgs['trinomial']=nil-- don't show trinomial with population unless it has morpha or other suffix
 end
 --templateArgs['binomial'] = nil -- don't show binomial with population (when population of species); nver set
 iftemplateArgs['population_extinct']=="yes"ortemplateArgs['population_extinct']=="true"then
 extinct=frame:expandTemplate{title='extinct'}-- use template to get tooltip
 end
 templateArgs['population']=extinct.."'''"..templateArgs['population'].."'''"
 end


 -- handle variety 
 iftemplateArgs['variety']ortemplateArgs['varietas']then-- should now be aliased
 localvSeparator=" ''var.'' "
 --alias done? templateArgs['variety']= templateArgs['variety'] or templateArgs['varietas'] -- will use variety as parameter TODO alias this
 templateArgs['variety_name']=extinct.."'''''"..string.sub(templateArgs['genus'],1,1)..'. '..string.sub(templateArgs['species'],1,1)..'.'..vSeparator..templateArgs['variety'].."'''''"
 templateArgs['trinomial']="''"..templateArgs['genus']..' '..templateArgs['species']..vSeparator..templateArgs['variety'].."''"
 --templateArgs['variety_authority'] = templateArgs['authority'] -- replicates authority in trinomial

 iftemplateArgs['subspecies']then-- subspecies needs to linked [TODO: add subspecies_link]
 localredirectName=templateArgs['genus']..' '..templateArgs['species'].." subsp. "..templateArgs['subspecies']
 localshortName="''"..string.sub(templateArgs['genus'],1,1)..'. '..string.sub(templateArgs['species'],1,1)..'.'..separator..templateArgs['subspecies'].."''"
 templateArgs['subspecies_name']="[["..redirectName..'|'..shortName.."]]"
 offset=offset+1-- offset when susbpecies AND variety
 templateArgs['subspecies_authority']=templateArgs['parent_authority']
 end
 end

 -- handle customisable infraspecies ranks

 -- alias (TODO move to parameter section when parameter name conversion complete; see talk page )
 iftemplateArgs['infraspecies1_name']ortemplateArgs['infraspecies_rank1']then
 templateArgs['infraspecies1_name1']=templateArgs['infraspecies1_name']ortemplateArgs['infraspecies_rank1']
 end
 iftemplateArgs['infraspecies2_name']ortemplateArgs['infraspecies_rank2']then
 templateArgs['infraspecies2_name']=templateArgs['infraspecies2_name']ortemplateArgs['infraspecies_rank2']
 end

 iftemplateArgs['infraspecies_rank1']then
 iftemplateArgs['subspecies']then-- link subspecies
 --templateArgs['subspecies_name'] = "''[[" .. fullName:gsub("%'*%<%/?small%>%'*","") .. "|" .. abbr_subspecies_name .. "]]''" 
 templateArgs['subspecies_name']="''[["..fullName.."|"..abbr_subspecies_name.."]]''"
 end

 localbinomial="''"..templateArgs['genus']..' '..templateArgs['species'].."''"
 localabbrSpeciesName=string.sub(templateArgs['genus'],1,1)..'.&nbsp;'..string.sub(templateArgs['species'],1,1)..'.'
 abbrSpeciesName="''"..abbrSpeciesName.."''"-- italicise
 iftemplateArgs['infraspecies_rank2']then
 localisrSeparator=" "
 iftemplateArgs['infraspecies_rank2_abbrev']then
 isrSeparator=" "..mw.text.trim(templateArgs['infraspecies_rank2_abbrev']).."&nbsp;"
 end
 templateArgs['trinomial']=binomial..isrSeparator..templateArgs['infraspecies_rank2']
 templateArgs['infraspecies_rank2']=abbrSpeciesName..isrSeparator..templateArgs['infraspecies_rank2']
 templateArgs['infraspecies_rank2']="'''"..templateArgs['infraspecies_rank2'].."'''"-- bold infraspecific name
 else
 localisrSeparator=" "
 iftemplateArgs['infraspecies_rank1_abbrev']then
 isrSeparator=" "..mw.text.trim(templateArgs['infraspecies_rank1_abbrev']).."&nbsp;"
 end
 templateArgs['trinomial']=binomial..isrSeparator..templateArgs['infraspecies_rank1']
 templateArgs['infraspecies_rank1']=abbrSpeciesName..isrSeparator..templateArgs['infraspecies_rank1']
 templateArgs['infraspecies_rank1']="'''"..templateArgs['infraspecies_rank1'].."'''"-- bold first infraspecific name
 end
 end

 --TODO what else do subspeciesbox and infraspeciesbox cover?)

 --[[ code from templates
  both: |trinomial_authority = {{{authority|{{{trinomial authority|{{{trinomial_authority|}}} }}} }}}
  infraspeciesbox: |species_authority = {{{parent_authority|{{{parent authority|{{{binomial authority|{{{binomial_authority|}}}}}}}}}}}}
  subspeciesbox: | species_authority = {{{parent authority|{{{binomial authority|{{{binomial_authority|}}}}}}}}}
  note: subspeciesbox doesn't recognise patent_authority with underscore
  monthly reports on subspeciesbox and infraspeciesbox
  no uses of parent_authority, binomial_authority or trinomial authority
  no uses of grandparent, greatgrandparent etc authorites
  ]]
 templateArgs['trinomial_authority']=templateArgs['authority']ornil

 ifnottemplateArgs['name']ortemplateArgs['name']==""then-- if page name not set
 templateArgs['name']=templateArgs['trinomial']
 end

 -- these are used by manual taxobox to complete the taxonomy table
 templateArgs['species']=templateArgs['species_name']
 templateArgs['subspecies']=templateArgs['subspecies_name']
 templateArgs['variety']=templateArgs['variety_name']

 --QUESTION what happens to parent taxa when subspecies and variety? 
 -- set species and subgenus authorities
 iftemplateArgs['subgenus']then
 offset=offset+1
 ifoffset==4then-- when subgenus, species, subspecies and variety
 templateArgs['subgenus_authority']=templateArgs['subgenus_authority']ortemplateArgs['greatgrandparent_authority']or""
 templateArgs['species_authority']=templateArgs['grandparent_authority']or""
 elseifoffset==3then-- when subgenus, species, (subspecies OR variety)
 templateArgs['subgenus_authority']=templateArgs['subgenus_authority']ortemplateArgs['grandparent_authority']or""
 templateArgs['species_authority']=templateArgs['parent_authority']or""
 end
 else-- only need to set species authority or subspecues (if also variety)
 ifoffset==3then-- species, subspecies and variety
 templateArgs['species_authority']=templateArgs['grandparent_authority']or""
 templateArgs['subspecies_authority']=templateArgs['parent_authority']or""
 elseifoffset==2then-- species, (subspecies or variety)
 templateArgs['species_authority']=templateArgs['parent_authority']or""
 end
 end

 templateArgs['display_taxa']=(templateArgs['display_taxa']or1)-2
 templateArgs['offset']=offset



 -- need to set subgenus_authority, species_authority, subspecies_authority and variety_authority

 --[[shift authorities for subspeciesbox (two steps or three if subgenus set)
 	 if templateArgs['subgenus'] and templateArgs['subgenus'] ~= "" then
 			templateArgs['subgenus_authority'] = templateArgs['grandparent_authority'] or ""
 			templateArgs['authority'] = templateArgs['greatgrandparent_authority'] or ""
 			templateArgs['parent_authority'] = templateArgs['greatgreatgrandparent_authority'] or ""
 			templateArgs['grandparent_authority'] = templateArgs['greatgreatgreatgrandparent_authority'] or ""
 			templateArgs['greatgrandparent_authority'] = templateArgs['greatgreatgreatgreatgrandparent_authority'] or ""
 			templateArgs['greatgreatgrandparent_authority'] = templateArgs['greatgreatgreatgreatgreatgrandparent_authority'] or ""
 		else
 			templateArgs['authority'] = templateArgs['grandparent_authority'] or ""
 			templateArgs['parent_authority'] = templateArgs['greatgrandparent_authority'] or ""
 			templateArgs['grandparent_authority'] = templateArgs['greatgreatgrandparent_authority'] or ""
 			templateArgs['greatgrandparent_authority'] = templateArgs['greatgreatgreatgrandparent_authority'] or ""
 			templateArgs['greatgreatgrandparent_authority'] = templateArgs['greatgreatgreatgreatgrandparent_authority']	 or ""
 		end
 		]]

 -- ========================= setup for AUTOMATIC TAXOBOX ================================
 -- CHECK authomatic taxobox pagename overrides taxon (e.g. Tortrix? destructus) for header
 -- it does but no italics in header for Tortrix? destructus

 --elseif info.auto == "automatictaxobox" then

 elseifinfo.auto=="virus"orinfo.auto=="virusbox"then
 templateArgs['virus']="yes"
 templateArgs['color_as']="Virus"
 ifnottemplateArgs['parent']then
 iftemplateArgs['taxon']then
 templateArgs['parent']=templateArgs['taxon']
 elseiftemplateArgs['species']then
 templateArgs['parent']=templateArgs['species']
 templateArgs['species']=nil
 else
 templateArgs['parent']=tostring(mw.title.getCurrentTitle())or""
 end
 else
 templateArgs['link_parent']="yes"-- if parent given, we want to link it
 end

 else

 -- "the automated taxobox first looks for the taxonomy template that matches the supplied |taxon= parameter "
 -- "(or, if none is supplied, the article's title, ignoring any parenthetical expressions). "
 ifnottemplateArgs['taxon']ortemplateArgs['taxon']==""then
 --templateArgs['taxon'] = templateArgs['name'] or tostring( mw.title.getCurrentTitle())
 templateArgs['taxon']=tostring(mw.title.getCurrentTitle())or""
 --TODO strip name of parenthetical terms off page title
 iftemplateArgs['taxon']~=""then
 --TODO error message and exit
 end
 end
 iftemplateArgs['parent']then
 templateArgs['link_parent']="yes"-- if parent given, we want to link it
 else
 templateArgs['parent']=templateArgs['taxon']-- otherwise set parent
 templateArgs['link_parent']="yes"-- we still want to link it? VERIFY
 end
 --TODO set name if parameter no supplies

 --[[ TODO if no taxonomy template, then call setup taxonomy template 
  		 {{#ifexist:Template:Taxonomy/{{{taxon|<includeonly>{{PAGENAME}}
  		 {{Automatic taxobox/floating intro|taxon={{{taxon|{{PAGENAME}}}}} }}
  		]]

 end-- end special handling for speciesbox, subspeciesbox, and automatic taxobox

 -- check taxonomy templates for automatic taxobox system
 --{{#ifexist:Template:Taxonomy/{{{taxon|<includeonly>{{PAGENAME}}</includeonly><noinclude>Acacia</noinclude>}}}
 -- |<noinclude><!--do nothing if it exists--></noinclude>
 -- |{{Automatic taxobox/floating intro|taxon={{{taxon|{{PAGENAME}}}}} }}
 -->}}

 end



 -------------------------------------------------------------------
 functionp.templateStyle(frame,src)
 returnframe:extensionTag('templatestyles','',{src=src});

 end

 -----------------------------------------
 functionp.testTables(frame)
 if1==1thenreturnend-- disable
 localroot=mw.html.create('table'):addClass('wikitable')

 localrow=root:tag('tr')-- add row using lua library
 localcell=row:tag('td')
 cell:wikitext('row A:')
 cell=row:tag('td'):wikitext('content A')

 row=root:tag('tr')-- add row using lua library 
 cell=row:tag('td'):wikitext('row B:')
 cell=row:tag('td')
 :wikitext('\n{|\n|-\n|P\n|Q\n|}')--but include a wikitxt table in one cell
 -- :done()

 -- row:done()
 --root=mw.html:allDone()
 root:wikitext('<tr><td>a</td><td>b</td></tr>')-- add row to root using html 
 root:wikitext('\n|-\n|X\n|Y\n')-- add row to root using wikitext (FAILS) 

 root:wikitext('\r|-\r|I\r|J\r')-- FAIL output |- |X |Y 

 root:wikitext(frame:preprocess('\n|-\n|U\n|V\n'))-- FAIL output |- |U |V 

 root:wikitext('<tr>\n|M\n|N\n</tr>')


 row=root:tag('tr'):node('<td>c</td><td>d</td>')-- adds row successfully
 row=root:tag('tr'):node('\n|Xc\n|Xd\n')-- fails to adds row


 row=root:tag('tr')-- add another row using lua library
 cell=row:tag('td'):wikitext('row C:')
 cell=row:tag('td'):wikitext('content C')

 root:node('\n{|\n|-\n|Xx\n|Yx\n|}\n')-- adds new table after

 --frame:preprocess
 returntostring(root)

 --[[ CONCLUSION: cannot mix wikitext freely in the node structure
  A complete wikitext table can be included in a cell (e.g. used for automatic taxonomy now)
  An alternative is to use wikitext for the whole taxobox table
 ]]
 end

 -- --------------------------- TEST AUTO TAXONOMY FUNCTIONS -----------------------------
 functionp.test(frame)

 locala=require("Module:Sandbox/Jts1882/Biota Infobox/auto")

 --local taxonTable = a.loadTaxonomyTable(frame) now done in showTaxonomyTable

 returna.showTaxonomyTable(frame)
 end




 -- All modules end by returning the variable containing its functions to Wikipedia.
 returnp