gVenn

This is the development version of gVenn; for the stable release version, see gVenn.

Proportional Venn and UpSet Diagrams for Gene Sets and Genomic Regions

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DOI: 10.18129/B9.bioc.gVenn

Bioconductor version: Development (3.23)

Tools to compute and visualize overlaps between gene sets or genomic regions. Venn diagrams with proportional areas are provided, while UpSet plots are recommended for larger numbers of sets. The package supports GRanges and GRangesList inputs, and integrates with analysis workflows for ChIP-seq, ATAC-seq, and other genomic interval data. It generates clean, interpretable, and publication-ready figures.

Author: Christophe Tav [aut, cre] ORCID iD ORCID: 0000-0001-8808-9617

Maintainer: Christophe Tav <christophe.tav at gmail.com>

Citation (from within R, enter citation("gVenn")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
 install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("gVenn")

For older versions of R, please refer to the appropriate Bioconductor release.