USADELLAB.org

THE USADEL LAB

Cell walls, metabolism and bioinformatics

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The group focuses on important questions in plant science like how do plants react to different sugar levels, in which ways do plants integrate carbon into their cell walls, and how can these walls be degraded and utilized. To answer these questions, the group combines classic biochemical and molecular research with novel bioinformatics tools and "omics" technologies.

To elucidate the mechanisms and pathways of cell wall biosynthesis, the group employs methods to measure cell wall precursors like nucleotide sugars and has already well established platforms for in depth cell wall characterization. Combinations of theoretical and experimental research are used to identify and validate novel candidate genes involved in plant biosynthetic pathways. Next generation sequencing is used to study whole genomes and transcriptomes of various economically relevant plant species. The resulting large amounts of data have to be processed and analyzed. Therefore, the group develops algorithms, tools, and implements machine learning to investigate big data. Finally, to facilitate public data access, the group designs and hosts databases with user friendly interfaces.

Latest news:

Tea genome

Tea genome

General | Jun 20, 2025

Led by Prof Wen and with Prof Fernie we analyzed the genome of tea.

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Sequencing the gigabase plant genome of the wild tomato species Solanum pennellii using Oxford Nanopore single molecule sequencing

Sequencing the gigabase plant genome of the...

General | Dec 19, 2016

Here we present approximately 120 Gbases of nanopore sequencing data representing a...

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TEPHA@RWTH-Wissenschaftsnacht „5 vor 12“

TEPHA@RWTH-Wissenschaftsnacht „5 vor 12"

General | Nov 2, 2016

We...

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TEPHA@Aachener Zeitung

TEPHA@Aachener Zeitung

General | Nov 2, 2016

Last Saturday (22th of OCtober) our TEPHA project was presented in the Aachener...

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Contact

Office hours

Monday-Friday

9:00 - 12:00



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