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BaseMolecule.h File Reference

Base class for all molecules, without display-specific information. More...

#include "Atom.h"
#include "Residue.h"
#include "Timestep.h"
#include "Fragment.h"
#include "Matrix4.h"
#include "intstack.h"
#include "NameList.h"

Go to the source code of this file.

Compounds

class BaseMolecule

Base class for all molecules, without display-specific information. This portion of a molecule contains the structural data, and all routines to find the structure (backbone, residues, etc). It does NOT contain the animation list; that is maintained by Molecule (which is derived from this class). More...

Defines

#define IS_HYDROGEN(s) (s[0] == 'H' || (isdigit(s[0]) && s[1] == 'H' ))

Detailed Description

Base class for all molecules, without display-specific information.

This portion of a molecule contains the structural data, and all routines to find the structure (backbone, residues, etc). It does NOT contain the Timestep array; that is maintained by DrawMolecule (which is derived from this class).

Definition in file BaseMolecule.h.

Define Documentation

#define IS_HYDROGEN ( s ) (s[0] == 'H' || (isdigit(s[0]) && s[1] == 'H' ))

Definition at line 529 of file BaseMolecule.h.

Referenced by BaseMolecule::analyze, and vmd_bond_search.