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Hi everyone, I use matplotlib to render a figure in a tkinter (the Tix library more precisely) canvas. It works very well but I can't turn off the autoscale (and I would like to), even by setting ax.set_autoscale_on(False). When I test with ax.get_autoscale_on(), the result is False, but the axes continues to autoscale. I didn't had this problem in the past with ubuntu 8.04. I have it since I made the update to the 8.10 distribution so I guess that it's because the version of matplotlib I use have changed also (but I don't remember the number of this previous version). Now I use python 2.5.2, Tix 8.4.0, mpl 0.98.3, numpy 1.2.1 ppa release, scipy 0.7.0 ppa release. Here is the graphic part of my app : class GraphFrame(Tix.Frame): def __init__(self,master): Tix.Frame.__init__(self,master,bd=10) self.gen = Tix.Frame(self) self.fps = Figure(figsize=(5,4),dpi=100,facecolor='w') self.tlps = 'Phase Space' self.xlps = {'xlabel' : r'$x$','fontsize' : 16} self.ylps = {'ylabel' : r'$p$','rotation' : 'horizontal','fontsize' : 16} self.aps = self.fps.add_subplot(111) self.aps.set_title(self.tlps) self.aps.set_xlabel(**self.xlps) self.aps.set_ylabel(**self.ylps) self.canvasps = FigureCanvasTkAgg(self.fps,master=self.gen) self.canvasps.get_tk_widget().pack(side=Tix.TOP,fill=Tix.BOTH,expand=1) self.toolbar = NavigationToolbar2TkAgg(self.canvasps, self.gen) self.toolbar.update() self.canvasps._tkcanvas.pack(side=Tix.TOP, fill=Tix.BOTH, expand=1) self.gen.grid(row=0, columnspan=14, sticky='NWSE') self.aps.set_autoscale_on(False) #doesn't work !!! # self.aps.autoscale_view(scalex=False,scaley=False) self.psLin = [] self.cl = ('r','g','b','c','y','m','k') self.coch = self.canvasps.mpl_connect('button_press_event', self.onpsclick) self.crh = self.canvasps.mpl_connect('button_release_event', self.onpsrelease) self.cmh = self.canvasps.mpl_connect('motion_notify_event', self.onpsmotion) self.cFrame = None self.press = False def ocps_connect(self): self.coch = self.canvasps.mpl_connect('button_press_event', self.onpsclick) self.crh = self.canvasps.mpl_connect('button_release_event', self.onpsrelease) self.cmh = self.canvasps.mpl_connect('motion_notify_event', self.onpsmotion) def ocps_disconnect(self): self.canvasps.mpl_disconnect(self.coch) self.canvasps.mpl_disconnect(self.crh) self.canvasps.mpl_disconnect(self.cmh) #some method I use to update the graph def psaddData_m(self,u,xmin,xmax,pmin,pmax,m=','): line = lines.Line2D(u[:,0],u[:,1], linestyle='None', marker=m, color=self.cl[np.mod(len(self.psLin)-1,6)]) self.psLin.append(line) self.psDraw(xmin,xmax,pmin,pmax) def psaddData_l(self,u,xmin,xmax,pmin,pmax,l='-'): line = lines.Line2D(u[:,0],u[:,1], linestyle=l, color=self.cl[np.mod(len(self.psLin)-1,6)]) self.psLin.append(line) self.psDraw(xmin,xmax,pmin,pmax) def psdelData(self,n): del self.psLin[n] self.aps.clear() # self.aps.cla() for l in self.psLin: self.aps.add_line(l) self.aps.set_title(self.tlps) self.aps.set_xlabel(**self.xlps) self.aps.set_ylabel(**self.ylps) self.aps.redraw_in_frame() self.canvasps.blit() def psDraw(self,xmin,xmax,pmin,pmax): # self.aps.clear() self.aps.cla() self.aps.set_xlim(xmin,xmax) self.aps.set_ylim(pmin,pmax) for l in self.psLin: self.aps.add_line(l) self.aps.set_title(self.tlps) self.aps.set_xlabel(**self.xlps) self.aps.set_ylabel(**self.ylps) self.aps.draw() self.canvasps.blit() # self.aps.set_autoscale_on(False) # self.aps.autoscale_view(scalex=False,scaley=False) # a = self.aps.get_autoscale_on() # print a def psifRedraw(self): self.aps.clear() # self.aps.cla() for l in self.psLin: self.aps.add_line(l) self.aps.set_title(self.tlps) self.aps.set_xlabel(**self.xlps) self.aps.set_ylabel(**self.ylps) self.aps.redraw_in_frame() self.canvasps.blit() def psRedraw(self): self.aps.redraw_in_frame() self.canvasps.blit() # click event handling def onpsclick(self,event): Bhv=self.cFrame.stDico['psMode'].get() if event.inaxes!=self.aps: return if Bhv == 'Nothing': return self.press = True if Bhv == 'Traj': niter=int(self.cFrame.stDico['n iter'].get()) jb = self.cFrame.TrajJacob.get() if jb: lj = float(self.cFrame.TJDirlStr.get()) hj = float(self.cFrame.TJDirhderStr.get()) jnb = self.cFrame.nTrajJacob.get() if jnb: ljn = float(self.cFrame.nTJDirlStr.get()) hjn = float(self.cFrame.nTJDirhderStr.get()) v = np.array([event.xdata,event.ydata]) s = [v] if jb: sj = [Jacob(v,hj,utils.dfridr)] if jnb: sjn = [Jacob(v,hjn,utils.dfridr)] for i in xrange(0,niter): u = pm.Map(v) s.append(u) v = u if jb: sj.append(Jacob(v,hj,utils.dfridr)) if jnb: sjn.append(np.dot(sjn[-1],Jacob(v,hjn,utils.dfridr))) w = np.vstack(s) line = lines.Line2D(w[:,0],w[:,1],color='b') if jb: for i in xrange(len(sj)): J = sj[i] v = s[i] (lr,vr) = eig(J,right=True) if reduce(lambda x,y : (np.abs(x)-1.)*(np.abs(y)-1.),lr) >= 0: print 'Problem : The point '+str(i+1)+' is not hyperbolic' print 'J=',J print 'l=',lr else: if abs(lr[0]) < 1.: u1 = vr[:,0] u2 = vr[:,1] else: u1 = vr[:,1] u2 = vr[:,0] ul1 = np.vstack([v-lj*u1,v+lj*u1]) ul2 = np.vstack([v-lj*u2,v+lj*u2]) line1 = lines.Line2D(ul1[:,0],ul1[:,1],color='b') line2 = lines.Line2D(ul2[:,0],ul2[:,1],color='r') self.aps.add_line(line1) self.aps.add_line(line2) if jnb: for i in xrange(len(sjn)): J = sjn[i] v = s[i] (lr,vr) = eig(J,right=True) if reduce(lambda x,y : (np.abs(x)-1.)*(np.abs(y)-1.),lr) >= 0: print 'Problem : The traj '+str(i+1)+' is not hyperbolic' print 'J=',J print 'l=',lr else: if abs(lr[0]) < 1.: u1 = vr[:,0] u2 = vr[:,1] else: u1 = vr[:,1] u2 = vr[:,0] ul1 = np.vstack([v-ljn*u1,v+ljn*u1]) ul2 = np.vstack([v-ljn*u2,v+ljn*u2]) line1 = lines.Line2D(ul1[:,0],ul1[:,1],color='g') line2 = lines.Line2D(ul2[:,0],ul2[:,1],color='m') self.aps.add_line(line1) self.aps.add_line(line2) elif Bhv == '1it': v = np.array([event.xdata,event.ydata]) u = pm.Map(v) w = np.vstack([v,u]) line = lines.Line2D(w[:,0],w[:,1], linestyle='None', marker='+', markersize=10., color='k') elif Bhv == 'Preim': xmin=float(self.cFrame.stDico['pixmin'].get()) xmax=float(self.cFrame.stDico['pixmax'].get()) pmin=float(self.cFrame.stDico['pipmin'].get()) pmax=float(self.cFrame.stDico['pipmax'].get()) nx=int(self.cFrame.stDico['pinx'].get()) ny=int(self.cFrame.stDico['pinp'].get()) tol=float(self.cFrame.stDico['pitol'].get()) it=int(self.cFrame.stDico['piter'].get()) al=float(self.cFrame.stDico['pialpha'].get()) npim = self.cFrame.preimmVar.get() v = np.array([event.xdata,event.ydata]) u = preMap(npim,v,xmin,xmax,pmin,pmax,nx,ny,tol,it,al) if u != None: w = np.vstack([v,u]) else: w = v w.shape = 1,2 line = lines.Line2D(w[:,0],w[:,1], linestyle='None', marker='+', markersize=10., color='k') elif Bhv == 'Jacob': l = float(self.cFrame.DirlStr.get()) h = float(self.cFrame.DirhderStr.get()) v = np.array([event.xdata,event.ydata]) J = Jacob(v,h,utils.dfridr) (lr,vr) = eig(J,right=True) if reduce(lambda x,y : (np.abs(x)-1.)*(np.abs(y)-1.),lr) >= 0: print 'Problem : The point is not hyperbolic' print 'J=',J print 'l=',lr return if abs(lr[0]) < 1.: u1 = vr[:,0] u2 = vr[:,1] else: u1 = vr[:,1] u2 = vr[:,0] ul1 = np.vstack([v-l*u1,v+l*u1]) ul2 = np.vstack([v-l*u2,v+l*u2]) line = lines.Line2D(ul1[:,0],ul1[:,1],color='b') line1 = lines.Line2D(ul2[:,0],ul2[:,1],color='r') self.aps.add_line(line1) self.aps.add_line(line) # self.aps.set_title(self.tlps) # self.aps.set_xlabel(**self.xlps) # self.aps.set_ylabel(**self.ylps) self.aps.redraw_in_frame() self.canvasps.blit() def onpsmotion(self,event): Bhv=self.cFrame.stDico['psMode'].get() if event.inaxes!=self.aps: return if self.press == False: return if Bhv == 'Nothing': return self.aps.clear() # self.aps.cla() for l in self.psLin: self.aps.add_line(l) self.aps.set_title(self.tlps) self.aps.set_xlabel(**self.xlps) self.aps.set_ylabel(**self.ylps) if Bhv == 'Traj': niter=int(self.cFrame.stDico['n iter'].get()) jb = self.cFrame.TrajJacob.get() if jb: lj = float(self.cFrame.TJDirlStr.get()) hj = float(self.cFrame.TJDirhderStr.get()) jnb = self.cFrame.nTrajJacob.get() if jnb: ljn = float(self.cFrame.nTJDirlStr.get()) hjn = float(self.cFrame.nTJDirhderStr.get()) v = np.array([event.xdata,event.ydata]) s = [v] if jb: sj = [Jacob(v,hj,utils.dfridr)] if jnb: sjn = [Jacob(v,hjn,utils.dfridr)] for i in xrange(0,niter): u = pm.Map(v) s.append(u) v = u if jb: sj.append(Jacob(v,hj,utils.dfridr)) if jnb: sjn.append(np.dot(sjn[-1],Jacob(v,hjn,utils.dfridr))) w = np.vstack(s) line = lines.Line2D(w[:,0],w[:,1],color='b') if jb: for i in xrange(len(sj)): J = sj[i] v = s[i] (lr,vr) = eig(J,right=True) if reduce(lambda x,y : (np.abs(x)-1.)*(np.abs(y)-1.),lr) >= 0: print 'Problem : The point '+str(i+1)+' is not hyperbolic' print 'J=',J print 'l=',lr else: if abs(lr[0]) < 1.: u1 = vr[:,0] u2 = vr[:,1] else: u1 = vr[:,1] u2 = vr[:,0] ul1 = np.vstack([v-lj*u1,v+lj*u1]) ul2 = np.vstack([v-lj*u2,v+lj*u2]) line1 = lines.Line2D(ul1[:,0],ul1[:,1],color='b') line2 = lines.Line2D(ul2[:,0],ul2[:,1],color='r') self.aps.add_line(line1) self.aps.add_line(line2) if jnb: for i in xrange(len(sjn)): J = sjn[i] v = s[i] (lr,vr) = eig(J,right=True) if reduce(lambda x,y : (np.abs(x)-1.)*(np.abs(y)-1.),lr) >= 0: print 'Problem : The traj '+str(i+1)+' is not hyperbolic' print 'J=',J print 'l=',lr else: if abs(lr[0]) < 1.: u1 = vr[:,0] u2 = vr[:,1] else: u1 = vr[:,1] u2 = vr[:,0] ul1 = np.vstack([v-ljn*u1,v+ljn*u1]) ul2 = np.vstack([v-ljn*u2,v+ljn*u2]) line1 = lines.Line2D(ul1[:,0],ul1[:,1],color='g') line2 = lines.Line2D(ul2[:,0],ul2[:,1],color='m') self.aps.add_line(line1) self.aps.add_line(line2) elif Bhv == '1it': v = np.array([event.xdata,event.ydata]) u = pm.Map(v) w = np.vstack([v,u]) line = lines.Line2D(w[:,0],w[:,1], linestyle='None', marker='+', markersize=10., color='k') elif Bhv == 'Preim': xmin=float(self.cFrame.stDico['pixmin'].get()) xmax=float(self.cFrame.stDico['pixmax'].get()) pmin=float(self.cFrame.stDico['pipmin'].get()) pmax=float(self.cFrame.stDico['pipmax'].get()) nx=int(self.cFrame.stDico['pinx'].get()) ny=int(self.cFrame.stDico['pinp'].get()) tol=float(self.cFrame.stDico['pitol'].get()) it=int(self.cFrame.stDico['piter'].get()) al=float(self.cFrame.stDico['pialpha'].get()) npim = self.cFrame.preimmVar.get() v = np.array([event.xdata,event.ydata]) u = preMap(npim,v,xmin,xmax,pmin,pmax,nx,ny,tol,it,al) if u != None: w = np.vstack([v,u]) else: w = v w.shape = 1,2 line = lines.Line2D(w[:,0],w[:,1], linestyle='None', marker='+', markersize=10., color='k') elif Bhv == 'Jacob': l = float(self.cFrame.DirlStr.get()) h = float(self.cFrame.DirhderStr.get()) v = np.array([event.xdata,event.ydata]) J = Jacob(v,h,utils.dfridr) (lr,vr) = eig(J,right=True) if reduce(lambda x,y : (np.abs(x)-1.)*(np.abs(y)-1.),lr) >= 0: print 'Problem : The point is not hyperbolic' print 'J=',J print 'l=',lr return if abs(lr[0]) < 1.: u1 = vr[:,0] u2 = vr[:,1] else: u1 = vr[:,1] u2 = vr[:,0] ul1 = np.vstack([v-l*u1,v+l*u1]) ul2 = np.vstack([v-l*u2,v+l*u2]) line = lines.Line2D(ul1[:,0],ul1[:,1],color='b') line1 = lines.Line2D(ul2[:,0],ul2[:,1],color='r') self.aps.add_line(line1) self.aps.add_line(line) # self.aps.set_title(self.tlps) # self.aps.set_xlabel(**self.xlps) # self.aps.set_ylabel(**self.ylps) self.aps.redraw_in_frame() self.canvasps.blit() def onpsrelease(self,event): self.press = False self.aps.clear() # self.aps.cla() for l in self.psLin: self.aps.add_line(l) self.aps.set_title(self.tlps) self.aps.set_xlabel(**self.xlps) self.aps.set_ylabel(**self.ylps) self.aps.redraw_in_frame() self.canvasps.blit() # end I don't know if it is a bug or something else but thank you in advance if you can help me. Jonathan
Hi all, I am trying to produce a weighted histogram. The help text for "hist" here: http://matplotlib.sourceforge.net/api/pyplot_api.html#matplotlib.pyplot.hist has a mention of adding weights, but it is not noted in the command line section where this should appear. Calling: hist(data,20,data_weights) gives the error: File "/usr/local/python-2.5.2/lib/python2.5/site-packages/matplotlib/pyplot.py", line 1868, in hist ret = gca().hist(*args, **kwargs) File "/usr/local/python-2.5.2/lib/python2.5/site-packages/matplotlib/axes.py", line 6236, in hist normed=bool(normed), new=True) File "/usr/local/python-2.5.2/lib/python2.5/site-packages/numpy/lib/function_base.py", line 353, in histogram mn, mx = range ValueError: too many values to unpack Calling: hist(data,20,weights=data_weights) gives the error: File "/usr/local/python-2.5.2/lib/python2.5/site-packages/matplotlib/pyplot.py", line 1868, in hist ret = gca().hist(*args, **kwargs) File "/usr/local/python-2.5.2/lib/python2.5/site-packages/matplotlib/axes.py", line 6371, in hist p.update(kwargs) File "/usr/local/python-2.5.2/lib/python2.5/site-packages/matplotlib/artist.py", line 453, in update raise AttributeError('Unknown property %s'%k) AttributeError: Unknown property weights There's no indication in the help text of where or how to insert the weights array. Thanks in advance, Michael
Perhaps this is a new feature since you sent this request, but I just came across pylab.suptitle('my super title') Seems to work fairly well, but the font sizes don't appear to behave as well as I'd like. Tommy Grav wrote: > > I have a plot that is divided into four subplots. > > pylab.figure() > pylab.subplot(221) > pylab.plot(a,b,"k-") > pylab.subplot(222) > pylab.plot(a,b,"k-") > pylab.subplot(223) > pylab.plot(a,b,"k-") > pylab.subplot(224) > pylab.plot(a,b,"k-") > > I would like to add a title to the entire plot, but pylab.title() only > applies to the most recent subplot. I have tried > > pylab.figure() > pylab.subplot(111) > pylab.title("Title Here") > pylab.subplot(221) > pylab.plot(a,b,"k-") > pylab.subplot(222) > pylab.plot(a,b,"k-") > pylab.subplot(223) > pylab.plot(a,b,"k-") > pylab.subplot(224) > pylab.plot(a,b,"k-") > > but this does not work as I do not create a plot for > the subplot(111) instance. Is there some way of getting > the type of title I want easily? > > Cheers > Tommy > > ------------------------------------------------------------------------- > This SF.net email is sponsored by: Microsoft > Defy all challenges. Microsoft(R) Visual Studio 2008. > http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ > _______________________________________________ > Matplotlib-users mailing list > Mat...@li... > https://lists.sourceforge.net/lists/listinfo/matplotlib-users > > -- View this message in context: http://www.nabble.com/title-when-using-subplot-tp15066004p24357703.html Sent from the matplotlib - users mailing list archive at Nabble.com.
Hi, Windows XP Python 2.5.2 matplotlib 0.98.5.2 I try to use numpoints for a legend my plot, but without luck. I always end up having three points in the legend despite setting numpoints=1 (see below towards the end of the code). Things work nicely though in a much simpler script. Help is greatly appreciated. Cheers Oliver [CODE START] # Import necessary modules import numpy as np import matplotlib.pyplot as plt # Import data for correlation plot assC = np.loadtxt('Apples_flowerFlavour_assC_corrPlot.txt') all = np.loadtxt('Apples_flowerFlavour_allAssessors_corrPlot.txt') x_assC = assC[:,1].copy() y_assC = assC[:,0].copy() x_all = all[:,1].copy() y_all = all[:,0].copy() # Plot values fig = plt.figure() ax = fig.add_subplot(111) ax.scatter(x_all, y_all, s=10, c='w', marker='o', edgecolor='grey', label='_') # NOTE: label='_' excludes the lable from legend ax.scatter([x_assC[0]], [y_assC[0]], s=50, c='r', marker='s', label='Apple Golden') ax.scatter([x_assC[1]], [y_assC[1]], s=50, c='r', marker='v', label='Granny Smith') ax.scatter([x_assC[2]], [y_assC[2]], s=50, c='r', marker='d', label='Green Star') ax.scatter([x_assC[3]], [y_assC[3]], s=50, c='r', marker='^', label='Kanzi') ax.scatter([x_assC[4]], [y_assC[4]], s=50, c='r', marker='>', label='Pink Lady') ax.scatter([x_assC[5]], [y_assC[5]], s=50, c='r', marker='<', label='Royal Gala') ax.scatter([x_assC[6]], [y_assC[6]], s=35, c='r', marker='o', label='Ecological') ax.plot([0,10], [0,10], 'b--') ax.set_xlim(0,10) ax.set_ylim(0,10) # Fix legend settings plt.legend(loc='lower right', shadow=True, numpoints=1) ltext = plt.gca().get_legend().get_texts() plt.setp(ltext[0], fontsize = 10, color = 'k') ax.set_xlabel('panel average') ax.set_ylabel('assessor C') plt.show() [CODE END]
Jae-Joon Lee wrote: > Well, if you think something is wrong, I guess you may have chosen a > wrong tool. > MPL is mainly for 2d plotting, and not very strong for animation > although it supports some. I just think that I have a nice hammer, a nice nail ... and not a clue on how to use a hammer (I'm a python noob, and high level language noob in general, the highest level language I used before starting python was C ... for embedded devices) I just though that I was thinking in the wrong way. > One possible option in your case is to save your plot as an image in > each round. And at the next round, you plot the newly available data > upon the shifted image. > > http://matplotlib.sourceforge.net/examples/animation/animation_blit_gtk2.html thanks, this looks great :) ---- This message contains confidential information and may contain information that is legally privileged. If you have received this message by mistake, please immediately notify us and delete the original message. Thank you. Ce message contient des informations confidentielles. S'il vous est parvenu par erreur, merci de bien vouloir nous en aviser par retour, de n'en faire aucun usage et de n'en garder aucune copie. ----
On Tue, Jun 30, 2009 at 12:09 PM, Ondrej Certik<on...@ce...> wrote: > Hi, > > this must have been answered many times already, but I searched the > archives, online docs, but couldn't find anything. > > If I do: > > $ python > Python 2.6.2 (release26-maint, Apr 19 2009, 01:58:18) > [GCC 4.3.3] on linux2 > Type "help", "copyright", "credits" or "license" for more information. >>>> import pylab >>>> pylab.plot([1, 3, 3]) > [<matplotlib.lines.Line2D object at 0x2154350>] >>>> pylab.show() >>>> pylab.show() >>>> > > the first pylab.show() shows the plot and stays hanging (this is ok) > and then if I close it, to get back to the shell, the second call to > show() does nothing. > > One fix is to use: > > ipython --pylab > > but if I just want to call regular python, or from my own script --- > how do I plot for the second time? I still haven't figured out how to fix it, so any feedback would be appreciated. Thanks, Ondrej
Meant to copy this to the list as well for completeness. ---------- Forwarded message ---------- From: Rick Muller <rpm...@gm...> Date: Sun, Jul 5, 2009 at 2:03 PM Subject: Re: [Matplotlib-users] Empty squares at end of data after interpolation with griddata? To: Jeff Whitaker <js...@fa...> The link should work now. What you say about extrapolation makes perfect sense. I wonder why those points aren't being computed. In any case, thanks for the help! Rick On Sun, Jul 5, 2009 at 7:27 AM, Jeff Whitaker <js...@fa...> wrote: > > http://files.getdropbox.com/u/533499/griddata-example-text.png >> > > > Rick: That URL doesn't work. > > griddata won't do extrapolation, that is it won't interpolate outside the > convex hull of the data. That's probably why you see those empty squares at > the edges. > > -- Rick Muller rpm...@gm... -- Rick Muller rpm...@gm...