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I want to create a 3d plot with matplotlib. I've gotten it to work, and can control the view (camera) angles, but I don't want any foreshortening / perspective. Is there a way to just have a plain orthographic projection instead?
Hello, Congratulations for this new minor release ! Someone mentionned on python-list that it's not available on pypi. I checked, and indeed it isn't. Should we upload it there? Thanks, N On 10 October 2013 20:19, Michael Droettboom <md...@st...> wrote: > I'm pleased to announce the release of matplotlib version 1.3.1. This is a bugfix release. > > It may be downloaded from here, or installed through the package manager of your choice (when available): > http://matplotlib.org/downloads > > The changelog is copied below: > > New in 1.3.1 > ------------ > > 1.3.1 is a bugfix release, primarily dealing with improved setup and > handling of dependencies, and correcting and enhancing the > documentation. > > The following changes were made in 1.3.1 since 1.3.0. > > Enhancements > ```````````` > > - Added a context manager for creating multi-page pdfs (see > `matplotlib.backends.backend_pdf.PdfPages`). > > - The WebAgg backend should no have lower latency over heterogeneous > Internet connections. > > Bug fixes > ````````` > > - Histogram plots now contain the endline. > > - Fixes to the Molleweide projection. > > - Handling recent fonts from Microsoft and Macintosh-style fonts with > non-ascii metadata is improved. > > - Hatching of fill between plots now works correctly in the PDF > backend. > > - Tight bounding box support now works in the PGF backend. > > - Transparent figures now display correctly in the Qt4Agg backend. > > - Drawing lines from one subplot to another now works. > > - Unit handling on masked arrays has been improved. > > Setup and dependencies > `````````````````````` > > - Now works with any version of pyparsing 1.5.6 or later, without displaying > hundreds of warnings. > > - Now works with 64-bit versions of Ghostscript on MS-Windows. > > - When installing from source into an environment without Numpy, Numpy > will first be downloaded and built and then used to build > matplotlib. > > - Externally installed backends are now always imported using a > fully-qualified path to the module. > > - Works with newer version of wxPython. > > - Can now build with a PyCXX installed globally on the system from source. > > - Better detection of Gtk3 dependencies. > > Testing > ``````` > > - Tests should now work in non-English locales. > > - PEP8 conformance tests now report on locations of issues. > > Mike > > -- > _ > |\/|o _|_ _. _ | | \.__ __|__|_|_ _ _ ._ _ > | ||(_| |(_|(/_| |_/|(_)(/_|_ |_|_)(_)(_)| | | > http://www.droettboom.com > > > > ------------------------------------------------------------------------------ > October Webinars: Code for Performance > Free Intel webinars can help you accelerate application performance. > Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most > from > the latest Intel processors and coprocessors. See abstracts and register > > http://pubads.g.doubleclick.net/gampad/clk?id=60134071&iu=/4140/ostg.clktrk > _______________________________________________ > Matplotlib-users mailing list > Mat...@li... > https://lists.sourceforge.net/lists/listinfo/matplotlib-users > >
Hi, all, It didn't work for me with mpl 1.3 but it does with 1.3.1 (openSuse 12.3, python 2.7.3, 64-bit). To install 1.3.1, I had to use the archive from SourceForge directly since only 1.3.0 is listed on pypi (I used pip) -- could that be the source of this issue for you? Regards, Paulo Meira --- On Fri, Oct 18, 2013 at 11:51 AM, Neal Becker <ndb...@gm...> wrote: > I am using mpl 1.3, python 2.7.3, 64-bit linux (fedora 19) > > Andrew Dawson wrote: > > > For what it is worth I see behaviour identical to Neal. I'm using a > > development version of matplotlib (v1.4.x, sorry I don't know the hash of > > the installed version) on 64-bit Linux (Ubuntu 12.04) and Python 2.7.3. > > That probably doesn't help much, except to show that this is not specific > > to just Neal! > > > > Andrew > > > > > > On 18 October 2013 14:40, Michael Droettboom > > <md...@st...> wrote: > > > >> This is really puzzling. What version of matplotlib are you running, > >> what platform, and what version of Python? Your example works just fine > >> for me. > >> > >> Mike > >> > >> On 10/18/2013 08:40 AM, Neal Becker wrote: > >> > Neal Becker wrote: > >> > > >> >> This example shows the error on my platform - the xlabel is not > >> rendered with > >> >> tex but instead the '$' are printed: > >> >> > >> >> import numpy as np > >> >> import matplotlib.pyplot as plt > >> >> plt.xkcd() > >> >> > >> >> fig = fig = plt.figure() > >> >> ax = fig.add_subplot(111) > >> >> plt.plot (np.arange (10), 2*np.arange(10)) > >> >> ax.set_xlabel ('$E_{s}/N_{0}$') > >> >> plt.show() > >> >> > >> >> > >> > And without plt.xkcd() the tex is rendered correctly > >> > > >> > > >> > > >> > > ------------------------------------------------------------------------------ > >> > October Webinars: Code for Performance > >> > Free Intel webinars can help you accelerate application performance. > >> > Explore tips for MPI, OpenMP, advanced profiling, and more. Get the > most > >> from > >> > the latest Intel processors and coprocessors. See abstracts and > register > >> > > >> > > >> > http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk > >> > _______________________________________________ > >> > Matplotlib-users mailing list > >> > Mat...@li... > >> > https://lists.sourceforge.net/lists/listinfo/matplotlib-users > >> > >> > >> -- > >> _ > >> |\/|o _|_ _. _ | | \.__ __|__|_|_ _ _ ._ _ > >> | ||(_| |(_|(/_| |_/|(_)(/_|_ |_|_)(_)(_)| | | > >> > >> http://www.droettboom.com > >> > >> > >> > >> > > ------------------------------------------------------------------------------ > >> October Webinars: Code for Performance > >> Free Intel webinars can help you accelerate application performance. > >> Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most > >> from > >> the latest Intel processors and coprocessors. See abstracts and > register > > >> > http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk > >> _______________________________________________ > >> Matplotlib-users mailing list > >> Mat...@li... > >> https://lists.sourceforge.net/lists/listinfo/matplotlib-users > >> > > > > > > > > > > > ------------------------------------------------------------------------------ > October Webinars: Code for Performance > Free Intel webinars can help you accelerate application performance. > Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most > from > the latest Intel processors and coprocessors. See abstracts and register > > http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk > _______________________________________________ > Matplotlib-users mailing list > Mat...@li... > https://lists.sourceforge.net/lists/listinfo/matplotlib-users >
I am using mpl 1.3, python 2.7.3, 64-bit linux (fedora 19) Andrew Dawson wrote: > For what it is worth I see behaviour identical to Neal. I'm using a > development version of matplotlib (v1.4.x, sorry I don't know the hash of > the installed version) on 64-bit Linux (Ubuntu 12.04) and Python 2.7.3. > That probably doesn't help much, except to show that this is not specific > to just Neal! > > Andrew > > > On 18 October 2013 14:40, Michael Droettboom > <md...@st...> wrote: > >> This is really puzzling. What version of matplotlib are you running, >> what platform, and what version of Python? Your example works just fine >> for me. >> >> Mike >> >> On 10/18/2013 08:40 AM, Neal Becker wrote: >> > Neal Becker wrote: >> > >> >> This example shows the error on my platform - the xlabel is not >> rendered with >> >> tex but instead the '$' are printed: >> >> >> >> import numpy as np >> >> import matplotlib.pyplot as plt >> >> plt.xkcd() >> >> >> >> fig = fig = plt.figure() >> >> ax = fig.add_subplot(111) >> >> plt.plot (np.arange (10), 2*np.arange(10)) >> >> ax.set_xlabel ('$E_{s}/N_{0}$') >> >> plt.show() >> >> >> >> >> > And without plt.xkcd() the tex is rendered correctly >> > >> > >> > >> ------------------------------------------------------------------------------ >> > October Webinars: Code for Performance >> > Free Intel webinars can help you accelerate application performance. >> > Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most >> from >> > the latest Intel processors and coprocessors. See abstracts and register >> > >> > >> http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk >> > _______________________________________________ >> > Matplotlib-users mailing list >> > Mat...@li... >> > https://lists.sourceforge.net/lists/listinfo/matplotlib-users >> >> >> -- >> _ >> |\/|o _|_ _. _ | | \.__ __|__|_|_ _ _ ._ _ >> | ||(_| |(_|(/_| |_/|(_)(/_|_ |_|_)(_)(_)| | | >> >> http://www.droettboom.com >> >> >> >> ------------------------------------------------------------------------------ >> October Webinars: Code for Performance >> Free Intel webinars can help you accelerate application performance. >> Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most >> from >> the latest Intel processors and coprocessors. See abstracts and register > >> http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk >> _______________________________________________ >> Matplotlib-users mailing list >> Mat...@li... >> https://lists.sourceforge.net/lists/listinfo/matplotlib-users >> > > >
For what it is worth I see behaviour identical to Neal. I'm using a development version of matplotlib (v1.4.x, sorry I don't know the hash of the installed version) on 64-bit Linux (Ubuntu 12.04) and Python 2.7.3. That probably doesn't help much, except to show that this is not specific to just Neal! Andrew On 18 October 2013 14:40, Michael Droettboom <md...@st...> wrote: > This is really puzzling. What version of matplotlib are you running, > what platform, and what version of Python? Your example works just fine > for me. > > Mike > > On 10/18/2013 08:40 AM, Neal Becker wrote: > > Neal Becker wrote: > > > >> This example shows the error on my platform - the xlabel is not > rendered with > >> tex but instead the '$' are printed: > >> > >> import numpy as np > >> import matplotlib.pyplot as plt > >> plt.xkcd() > >> > >> fig = fig = plt.figure() > >> ax = fig.add_subplot(111) > >> plt.plot (np.arange (10), 2*np.arange(10)) > >> ax.set_xlabel ('$E_{s}/N_{0}$') > >> plt.show() > >> > >> > > And without plt.xkcd() the tex is rendered correctly > > > > > > > ------------------------------------------------------------------------------ > > October Webinars: Code for Performance > > Free Intel webinars can help you accelerate application performance. > > Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most > from > > the latest Intel processors and coprocessors. See abstracts and register > > > > > http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk > > _______________________________________________ > > Matplotlib-users mailing list > > Mat...@li... > > https://lists.sourceforge.net/lists/listinfo/matplotlib-users > > > -- > _ > |\/|o _|_ _. _ | | \.__ __|__|_|_ _ _ ._ _ > | ||(_| |(_|(/_| |_/|(_)(/_|_ |_|_)(_)(_)| | | > > http://www.droettboom.com > > > > ------------------------------------------------------------------------------ > October Webinars: Code for Performance > Free Intel webinars can help you accelerate application performance. > Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most > from > the latest Intel processors and coprocessors. See abstracts and register > > http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk > _______________________________________________ > Matplotlib-users mailing list > Mat...@li... > https://lists.sourceforge.net/lists/listinfo/matplotlib-users > -- Dr Andrew Dawson Atmospheric, Oceanic & Planetary Physics Clarendon Laboratory Parks Road Oxford OX1 3PU, UK Tel: +44 (0)1865 282438 Email: da...@at... Web Site: http://www2.physics.ox.ac.uk/contacts/people/dawson
This is really puzzling. What version of matplotlib are you running, what platform, and what version of Python? Your example works just fine for me. Mike On 10/18/2013 08:40 AM, Neal Becker wrote: > Neal Becker wrote: > >> This example shows the error on my platform - the xlabel is not rendered with >> tex but instead the '$' are printed: >> >> import numpy as np >> import matplotlib.pyplot as plt >> plt.xkcd() >> >> fig = fig = plt.figure() >> ax = fig.add_subplot(111) >> plt.plot (np.arange (10), 2*np.arange(10)) >> ax.set_xlabel ('$E_{s}/N_{0}$') >> plt.show() >> >> > And without plt.xkcd() the tex is rendered correctly > > > ------------------------------------------------------------------------------ > October Webinars: Code for Performance > Free Intel webinars can help you accelerate application performance. > Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from > the latest Intel processors and coprocessors. See abstracts and register > > http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk > _______________________________________________ > Matplotlib-users mailing list > Mat...@li... > https://lists.sourceforge.net/lists/listinfo/matplotlib-users -- _ |\/|o _|_ _. _ | | \.__ __|__|_|_ _ _ ._ _ | ||(_| |(_|(/_| |_/|(_)(/_|_ |_|_)(_)(_)| | | http://www.droettboom.com
Neal Becker wrote: > This example shows the error on my platform - the xlabel is not rendered with > tex but instead the '$' are printed: > > import numpy as np > import matplotlib.pyplot as plt > plt.xkcd() > > fig = fig = plt.figure() > ax = fig.add_subplot(111) > plt.plot (np.arange (10), 2*np.arange(10)) > ax.set_xlabel ('$E_{s}/N_{0}$') > plt.show() > > And without plt.xkcd() the tex is rendered correctly
Michael Droettboom wrote: > On 10/18/2013 08:20 AM, Neal Becker wrote: >> Michael Droettboom wrote: >> >>> The built-in mathtext support does. (I can put "xkcd()" at the top of >>> the mathtext_demo.py example and all is well). >>> >>> It does not work when |text.usetex| is True (when using external TeX). >>> But in that case, it should have thrown an exception: >>> >>> |Traceback (most recent call last): >>> File "mathtext_demo.py", line 9, in <module> >>> xkcd() >>> File >>> "/home/mdboom/python/lib/python2.7/site-packages/matplotlib-1.4.x-py2.7- >> linux-x86_64.egg/matplotlib/pyplot.py", >>> line 293, in xkcd >>> "xkcd mode is not compatible with text.usetex = True") >>> RuntimeError: xkcd mode is not compatible with text.usetex = True| >>> >>> Mike >>> >>> On 10/18/2013 07:24 AM, Neal Becker wrote: >>> >>>> It appears that latex doesn't work with xkcd? >>>> >>>> I put for example: >>>> self.ax.set_xlabel ('$E_s/N_0 >>>> >>>> >>>> ) >>>> >>>> Which go rendered with the ' >>>> >>>> >>>> signs and not as latex >>>> >>>> And my vertical axis was labeled as: >>>> >>>> $\mathdefault{10^{3}}$ ... >>>> >>>> >> Strange. I don't have anything about usetex in the script, or in my >> .matplotlibrc - all it has is: >> >> backend : Qt4Agg >> mathtext.fontset: stix >> >> > > Puzzling. Do you have a matplotlibrc in the current working directory? > No. Also tried removing .matplotlibrc (in ~/.matplotlib).
Hello, The script pasted below plots a square array. The (very small) output PDF is attached to this posting. For reasons I do not understand, there's a fine additional border immediately at the top and bottom of the array. If the commented-out line of code is removed, the strange border disappears. Now you will ask, why do I create the figure in this way and don't simply use the commented-out line? The answer is that this script is a simplified version of the function "map" from http://git.kwant-project.org/kwant/tree/kwant/plotter.py?id=v1.0.0 There, we need to create a figure also when pyplot has not been imported. If we would import matplotlib.pyplot, the user of our package could not freely choose the matplotlib backend himself. Thanks, Christoph **************************************************************** import numpy as np from matplotlib import pyplot from matplotlib.figure import Figure from matplotlib.backends.backend_agg import FigureCanvasAgg data = np.random.random((11, 11)) fig = Figure() ax = fig.add_subplot(1, 1, 1, aspect='equal', adjustable='datalim') # Uncommenting the following line makes it work. # fig, ax = pyplot.subplots() image = ax.imshow(data, extent=(-49.5, 49.5, -49.5, 49.5), interpolation='none') fig.canvas = FigureCanvasAgg(fig) fig.set_size_inches(5, 5) fig.savefig('test.pdf')
On 10/18/2013 08:20 AM, Neal Becker wrote: > Michael Droettboom wrote: > >> The built-in mathtext support does. (I can put "xkcd()" at the top of >> the mathtext_demo.py example and all is well). >> >> It does not work when |text.usetex| is True (when using external TeX). >> But in that case, it should have thrown an exception: >> >> |Traceback (most recent call last): >> File "mathtext_demo.py", line 9, in <module> >> xkcd() >> File >> "/home/mdboom/python/lib/python2.7/site-packages/matplotlib-1.4.x-py2.7- > linux-x86_64.egg/matplotlib/pyplot.py", >> line 293, in xkcd >> "xkcd mode is not compatible with text.usetex = True") >> RuntimeError: xkcd mode is not compatible with text.usetex = True| >> >> Mike >> >> On 10/18/2013 07:24 AM, Neal Becker wrote: >> >>> It appears that latex doesn't work with xkcd? >>> >>> I put for example: >>> self.ax.set_xlabel ('$E_s/N_0 >>> >>> >>> ) >>> >>> Which go rendered with the ' >>> >>> >>> signs and not as latex >>> >>> And my vertical axis was labeled as: >>> >>> $\mathdefault{10^{3}}$ ... >>> >>> > Strange. I don't have anything about usetex in the script, or in my > .matplotlibrc - all it has is: > > backend : Qt4Agg > mathtext.fontset: stix > > Puzzling. Do you have a matplotlibrc in the current working directory? Mike -- _ |\/|o _|_ _. _ | | \.__ __|__|_|_ _ _ ._ _ | ||(_| |(_|(/_| |_/|(_)(/_|_ |_|_)(_)(_)| | | http://www.droettboom.com
This example shows the error on my platform - the xlabel is not rendered with tex but instead the '$' are printed: import numpy as np import matplotlib.pyplot as plt plt.xkcd() fig = fig = plt.figure() ax = fig.add_subplot(111) plt.plot (np.arange (10), 2*np.arange(10)) ax.set_xlabel ('$E_{s}/N_{0}$') plt.show() Michael Droettboom wrote: > The built-in mathtext support does. (I can put "xkcd()" at the top of > the mathtext_demo.py example and all is well). > > It does not work when |text.usetex| is True (when using external TeX). > But in that case, it should have thrown an exception: > > |Traceback (most recent call last): > File "mathtext_demo.py", line 9, in <module> > xkcd() > File > "/home/mdboom/python/lib/python2.7/site-packages/matplotlib-1.4.x-py2.7- linux-x86_64.egg/matplotlib/pyplot.py", > line 293, in xkcd > "xkcd mode is not compatible with text.usetex = True") > RuntimeError: xkcd mode is not compatible with text.usetex = True| > > Mike > > On 10/18/2013 07:24 AM, Neal Becker wrote: > >> It appears that latex doesn't work with xkcd? >> >> I put for example: >> self.ax.set_xlabel ('$E_s/N_0 >> >> >> ) >> >> Which go rendered with the ' >> >> >> signs and not as latex >> >> And my vertical axis was labeled as: >> >> $\mathdefault{10^{3}}$ ... >> >> >> ------------------------------------------------------------------------------ >> October Webinars: Code for Performance >> Free Intel webinars can help you accelerate application performance. >> Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from >> the latest Intel processors and coprocessors. See abstracts and register > >> http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk >> _______________________________________________ >> Matplotlib-users mailing list >> Mat...@li... >> https://lists.sourceforge.net/lists/listinfo/matplotlib-users >
Michael Droettboom wrote: > The built-in mathtext support does. (I can put "xkcd()" at the top of > the mathtext_demo.py example and all is well). > > It does not work when |text.usetex| is True (when using external TeX). > But in that case, it should have thrown an exception: > > |Traceback (most recent call last): > File "mathtext_demo.py", line 9, in <module> > xkcd() > File > "/home/mdboom/python/lib/python2.7/site-packages/matplotlib-1.4.x-py2.7- linux-x86_64.egg/matplotlib/pyplot.py", > line 293, in xkcd > "xkcd mode is not compatible with text.usetex = True") > RuntimeError: xkcd mode is not compatible with text.usetex = True| > > Mike > > On 10/18/2013 07:24 AM, Neal Becker wrote: > >> It appears that latex doesn't work with xkcd? >> >> I put for example: >> self.ax.set_xlabel ('$E_s/N_0 >> >> >> ) >> >> Which go rendered with the ' >> >> >> signs and not as latex >> >> And my vertical axis was labeled as: >> >> $\mathdefault{10^{3}}$ ... >> >> Strange. I don't have anything about usetex in the script, or in my .matplotlibrc - all it has is: backend : Qt4Agg mathtext.fontset: stix
Nicolas Rougier writes: > Would something like this suit your needs ? > > (...) Thanks. Setting figsize is indeed the way to achieve (almost) what I wanted. My other followup in this thread describes the remaining issue.
Joe, thank you very much for your reply. So the "figsize" of a matplotlib plot is the physical size of the region between the axes where the data is shown? If this is indeed the case, as it seems, then achieving (almost) what I wanted is as easy as setting a figsize with the proper aspect ratio, like in your example. Before your reply, I believed that "figure size" in matplotlib refers to the size of the whole figure (including axes, axis labels, and borders), as "figure" in matplotlib seems to be a name for instances of matplotlib.figure.Figure which are the whole thing. I said "almost" in the first paragraph as it would be nice if there was a way to create figures that have a given total width (after cropping) at a given font size. The reason is this: In many scientific journals (for example Physical Review), figures are scaled to have the same width as a column of text. If I prepare a bunch of figures with the same width "within the axes" and consistent font sizes and line widths, the resulting figures will typically have somewhat different total widths. After scaling the figures to the same width, the font sizes and line widths will differ slightly from figure to figure. Christoph
The built-in mathtext support does. (I can put "xkcd()" at the top of the mathtext_demo.py example and all is well). It does not work when |text.usetex| is True (when using external TeX). But in that case, it should have thrown an exception: |Traceback (most recent call last): File "mathtext_demo.py", line 9, in <module> xkcd() File "/home/mdboom/python/lib/python2.7/site-packages/matplotlib-1.4.x-py2.7-linux-x86_64.egg/matplotlib/pyplot.py", line 293, in xkcd "xkcd mode is not compatible with text.usetex = True") RuntimeError: xkcd mode is not compatible with text.usetex = True| Mike On 10/18/2013 07:24 AM, Neal Becker wrote: > It appears that latex doesn't work with xkcd? > > I put for example: > self.ax.set_xlabel ('$E_s/N_0 > > > ) > > Which go rendered with the ' > > > signs and not as latex > > And my vertical axis was labeled as: > > $\mathdefault{10^{3}}$ ... > > > ------------------------------------------------------------------------------ > October Webinars: Code for Performance > Free Intel webinars can help you accelerate application performance. > Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from > the latest Intel processors and coprocessors. See abstracts and register > > http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk > _______________________________________________ > Matplotlib-users mailing list > Mat...@li... > https://lists.sourceforge.net/lists/listinfo/matplotlib-users -- _ |\/|o _|_ _. _ | | \.__ __|__|_|_ _ _ ._ _ | ||(_| |(_|(/_| |_/|(_)(/_|_ |_|_)(_)(_)| | | http://www.droettboom.com
It appears that latex doesn't work with xkcd? I put for example: self.ax.set_xlabel ('$E_s/N_0$') Which go rendered with the '$' signs and not as latex And my vertical axis was labeled as: $\mathdefault{10^{3}}$ ...