matplotlib-users Mailing List for matplotlib (Page 7)

Dear all, 
Is there a way that I can set the popup window that appears when I issue a
plotting command always on top?
cheers,
Chao
-- 
View this message in context: http://old.nabble.com/how-to-set-popup-window-always-on-top--tp34000345p34000345.html
Sent from the matplotlib - users mailing list archive at Nabble.com.

On Fri, Jun 8, 2012 at 3:36 AM, Maximilian Fabricius
<mfa...@gm...> wrote:
> it seems that whenever I plot something, a window opens.
>
> from matplotlib import pylab
> import numpy
> pylab.plot(numpy.random.normal(size=100))
>
> Now, I have code that is supposed to produce diagnostic plots as PDFs. Only
Before importing pylab, do
import matplotlib
matplotlib.use('pdf')
The FAQ for using mpl in a web app server is pretty relevant to this use case
http://matplotlib.sourceforge.net/faq/howto_faq.html#matplotlib-in-a-web-application-server
JDH

On Fri, Jun 8, 2012 at 4:36 AM, Maximilian Fabricius
<mfa...@gm...>wrote:
> Hi all,
>
> it seems that whenever I plot something, a window opens.
>
> from matplotlib import pylab
> import numpy
> pylab.plot(numpy.random.normal(size=100))
>
> Now, I have code that is supposed to produce diagnostic plots as PDFs. Only
> when I pass a command line option the script should actually open a
> window and also display
> the results on the screen.
>
> I am pretty sure that in earlier times the window would only open when
> I call pylab.show().
>
> It may well be that I messed too much with my matplotlibrc, if you
> could just point me in the right direction ...
>
> I use matplotlib 1.0.1 on a Mac with the MacOSX backend.
>
> Maximilian
>
>
You should see if you accidentially turned on the interactive mode. Just
make sure that the "interactive" setting is set to False.
Ben Root

We have src code and binaries for the second release candidate of
v1.1.1. This is likely our last ever python2.4 supported release, and
is strictly a bug fix release since v1.1.0. Nonetheless, an enormous
amount of work has gone into making this perhaps the most robust and
well-tested MPL release yet, with over 200 bugfix commits since the
last release.
Downloads at:
http://sourceforge.net/projects/matplotlib/files/matplotlib/matplotlib-1.1.1/
Testers welcome!
Commit log below:
commit f763cd11f50437568f8146b822ca8f25647cbb61
Author: Eric Firing <ef...@ha...>
Date: Mon Jun 11 09:25:26 2012 -1000
 Try alternative baseline image for mathfont_stix_14.png
commit 97f713098a71c70d70c46602794c2a0fd126b614
Merge: 7038f78 61e84df
Author: John Hunter <jd...@gm...>
Date: Sat Jun 9 13:31:42 2012 -0700
 Merge pull request #938 from jkseppan/simplify-ttconv-loop
 Simplify ttconv loop
commit 7038f78e280aca7aeabffd0c22ca7e79072b900d
Merge: 3c6a107 f07af9a
Author: Eric Firing <ef...@ha...>
Date: Sat Jun 9 12:37:20 2012 -0700
 Merge pull request #936 from ianthomas23/838_delaunay_duplicate_points
 Correct handling of duplicate points in delaunay triangulation
commit 61e84dfbd73bd361c5962f9789229489603c9831
Merge: 067bf0c 1bade3b
Author: Jouni K. Seppänen <jk...@ik...>
Date: Sat Jun 9 21:34:24 2012 +0300
 Merge branch 'try-fix-937' into simplify-ttconv-loop
commit 1bade3bc69ac6fe628996842cdb6417b7777ecec
Author: Jouni K. Seppänen <jk...@ik...>
Date: Sat Jun 9 16:48:56 2012 +0300
 Do output directly from list
 Having the prev and next iterators is not much worse than indexing
 the vector, and initializing the vector became too verbose.
commit 067bf0c7c8bcdfb1f83875b5dd916ededcbcc0fa
Author: Jouni K. Seppänen <jk...@ik...>
Date: Sat Jun 9 14:05:53 2012 +0300
 Simplify a loop in ttconv
 Replace a while loop with complicated break and continue cases by
 a for loop that has the iteration and end-condition testing in one
 place only.
commit ae96cad31dbb8d2fc719ac8b9ea12a31a9c7457e
Author: Jouni K. Seppänen <jk...@ik...>
Date: Sat Jun 9 13:48:12 2012 +0300
 Don't use iteration constructor
 Apparently some compilers don't support that.
commit f07af9a878dcd8add3ca134d18d806baf7a35311
Author: Ian Thomas <ian...@gm...>
Date: Fri Jun 8 19:45:21 2012 +0100
 Removed unnecessary duplication of arrays.
commit 3c6a1070c8247e8c6f5acd093f0e00ca01cdb635
Merge: f929f74 70e9c33
Author: Michael Droettboom <md...@gm...>
Date: Fri Jun 8 09:42:00 2012 -0700
 Merge pull request #933 from mdboom/font-crash
 Crash and test failure during test_font_styles on win-amd64-py2.7
commit 70e9c33e6268a87fbdeef56d60260a8b8417b8a5
Author: Michael Droettboom <md...@gm...>
Date: Fri Jun 8 11:06:41 2012 -0400
 Fix a segfault in font conversion.
commit f929f74910255a4aeeb017bd324194933b2b17cc
Merge: 21fad58 37ae231
Author: Michael Droettboom <md...@gm...>
Date: Fri Jun 8 07:33:33 2012 -0700
 Merge pull request #930 from mdboom/yaarrow_constructor
 YAArrow.figure gets overwritten during superclass construction
commit 37ae231b9a56ae6f303599b48f7f18ea41ede679
Author: Michael Droettboom <md...@gm...>
Date: Fri Jun 8 10:33:04 2012 -0400
 Add comment
commit 21fad585775b06c06f141f768570a9f65b2729cd
Merge: 79deb35 555dac5
Author: Michael Droettboom <md...@gm...>
Date: Fri Jun 8 04:39:39 2012 -0700
 Merge pull request #935 from idealisms/v1.1.x
 V1.1.x branch, Fix a possible infinite loop by incrementing one of
the variables used in the loop conditional.
commit d55d861d4275c22af5aecdfb718e5914369675d9
Author: Ian Thomas <ian...@gm...>
Date: Fri Jun 8 09:55:29 2012 +0100
 Added unit test.
commit 4fc08fbbcd7bc299a96d2a0400a8911837cd7846
Author: Ian Thomas <ian...@gm...>
Date: Fri Jun 8 08:00:49 2012 +0100
 Corrected duplicate points in delaunay.
commit 555dac5817c2d76f198d7288963041ab6b7c6dfc
Author: Richard Trieu <rt...@go...>
Date: Thu Jun 7 16:38:47 2012 -0700
 Fix a possible infinite loop by incrementing one of the variables
used in the loop conditional.
 This was detected by Richard Trieu when compiling with clang.
commit 1552264376818db10cb8b23cf4af0242d736f240
Author: Michael Droettboom <md...@gm...>
Date: Thu Jun 7 08:52:02 2012 -0400
 Fixes #930. The YAArrow constructor does not correctly set the figure.
commit 79deb353df992e6aba8b5fd040abbda3e81dcbf6
Merge: 3c4a7a6 1928306
Author: Michael Droettboom <md...@gm...>
Date: Wed Jun 6 12:15:26 2012 -0700
 Merge pull request #927 from mdboom/svg-freesans
 SVG Freesans rendering
commit 1928306a050ff2b22979af4d4db2b60be7d22a13
Author: Michael Droettboom <md...@gm...>
Date: Wed Jun 6 13:45:31 2012 -0400
 Fixes #913. Paths that start with an "OFF" point should use their
last point as an initial MOVETO. This is the SVG-specific corrolory
to #905.
commit 3c4a7a60b360f7971db1d84ec3ed3337e2b508c4
Merge: 1d33483 06606d4
Author: Phil Elson <phi...@gm...>
Date: Wed Jun 6 07:19:23 2012 -0700
 Merge pull request #922 from cgohlke/v1.1.x
 Pass ints to Tk.Canvas.create_image V1.1.x
commit 06606d4f2d505ad45a230fa9963ed857a5a49a37
Author: cgohlke <cg...@uc...>
Date: Tue Jun 5 11:31:26 2012 -0700
 Pass ints to Tk.Canvas.create_image
commit 1d3348314e4b1a289242b4678fbc0b3d928cf272
Author: Michael Droettboom <md...@gm...>
Date: Tue Jun 5 08:53:52 2012 -0400
 Backport #920 to the v1.1.x branch
commit 04e87dd42132ad2df405cea2385a661b51a4f5f1
Merge: 88ffe1f 65828b5
Author: Eric Firing <ef...@ha...>
Date: Fri Jun 1 11:53:57 2012 -0700
 Merge pull request #756 from tonysyu/fix-resize-bug
 Fix bug when resizing qt4 figure window.
commit 88ffe1f195794bc8cdfeb831425cbabd7c11b8a1
Author: Michael Droettboom <md...@gm...>
Date: Fri Jun 1 11:18:29 2012 -0400
 Add info about installing from source using Pip. Closes #646.
commit 848a67796976b4a59d30c8bcd63d201f5b40ec61
Merge: 7ba1965 5d881a2
Author: Eric Firing <ef...@ha...>
Date: Thu May 31 10:03:30 2012 -0700
 Merge pull request #911 from pelson/ticker_fix
 Fix ported from #910
commit 7ba19653afbb39ab0a92166daff5a53b0a926895
Merge: 6741580 3da8212
Author: Jouni K. Seppänen <jk...@ik...>
Date: Thu May 31 09:48:04 2012 -0700
 Merge pull request #905 from jkseppan/issue-903
 Fix TrueType to Type-3 font conversion
commit 5d881a2d42ab2009a0815bf5917f4a5778fc9851
Author: Phil Elson <phi...@ho...>
Date: Thu May 31 11:00:16 2012 +0100
 Fixed string concatenation.
commit f9e9d58b75b32717fea3a543e4d25646fd494c99
Author: Phil Elson <phi...@ho...>
Date: Thu May 31 10:54:15 2012 +0100
 .
commit 2b44037dfb6b7992b27940d2aa9a5d2ef9dc525c
Author: Phil Elson <phi...@ho...>
Date: Thu May 31 10:51:57 2012 +0100
 Ported fix from #910
commit 3da8212e73043cba6358296a9d72072e5e644eed
Author: Michael Droettboom <md...@gm...>
Date: Wed May 30 11:47:43 2012 -0400
 Install the mpltest.ttf file
commit bd510d8b7d3b3c8739875bdbae82bbf05d0d4c25
Author: Michael Droettboom <md...@gm...>
Date: Wed May 30 11:47:31 2012 -0400
 Remove PNG from the test_ttconv test -- it doesn't seem to work
across freetype versions, and also it doesn't actually test ttconv,
wihch is not used by the Agg backend.
commit b8cab7293a2db0fc1ff692bd3eda09beb482af17
Author: Jouni K. Seppänen <jk...@ik...>
Date: Tue May 29 23:30:36 2012 +0300
 Move test font inside test directory
commit 253d2be79e520a00a8290be7909540ec54d9b4f9
Author: Jouni K. Seppänen <jk...@ik...>
Date: Tue May 29 21:06:37 2012 +0300
 Add a test case for ttconv
 If I enable svg, I see artifacts in the resulting file that look
 like there are similar bugs as #903 in svg.
commit dbc6ef2e77ddbee70f4ff659d0dda1121d46a88a
Author: Jouni K. Seppänen <jk...@ik...>
Date: Sun May 27 17:24:18 2012 +0300
 Fix TrueType to Type-3 font conversion
 The code did not handle correctly glyph contours where the first
 point was off-path. This changes the conversion algorithm to a
 hopefully clearer one, which explicitly inserts all implicit on-path
 points between off-path ones as a first step before outputting the
 PostScript code.
commit 6741580ea0eb6eab6566d1a5e96e5161d33bba8f
Merge: f5815b0 cb92e31
Author: Eric Firing <ef...@ha...>
Date: Sat May 26 10:10:35 2012 -0700
 Merge pull request #886 from efiring/wxversion_msg
 Add wxversion-specific error message. Closes #885.
commit f5815b07a97fb6321df48705c66ea3ea47591a6a
Merge: 892c715 91283ec
Author: Benjamin Root <ben...@gm...>
Date: Fri May 25 08:10:21 2012 -0700
 Merge pull request #900 from pelson/doc_typo
 Fixed call signature typos.
commit 91283ecce1063f021d44c4d7e48e321edb7b727f
Author: Phil Elson <phi...@ho...>
Date: Fri May 25 16:04:28 2012 +0100
 Fixed call signature typos.
commit 892c7158f0ab1f0f01570a843398d76b7e88f2ea
Merge: 50381be 518b9a9
Author: Michael Droettboom <md...@gm...>
Date: Thu May 24 06:54:21 2012 -0700
 Merge pull request #894 from hmeine/qt4_ignore_extra_mouse_buttons
 let Qt4 backend ignore extra mouse buttons (fixes exceptions)
commit 518b9a9ddd793792116012386ee8c465710da780
Author: Hans Meine <han...@gm...>
Date: Wed May 23 11:10:24 2012 +0200
 backend_qt4: make button mapping definition use Qt's constants
commit 4ea79bbc82af8ac82bec086d820bef87e28efcdb
Author: Hans Meine <han...@gm...>
Date: Wed May 23 10:58:21 2012 +0200
 fix exceptions in qt4 backend with extra mouse buttons
commit 50381be1e93a43bc24a19b7da5b60de91d020e92
Author: Michael Droettboom <md...@gm...>
Date: Wed May 23 10:26:06 2012 -0400
 Fix a bunch of warnings in the documentation build
commit 7085dade2873cd89d0699af2847360ab7ac1a190
Author: Michael Droettboom <md...@gm...>
Date: Wed May 23 09:58:52 2012 -0400
 Fix mathtext_examples so it runs.
commit fbbf5bba79c2b0f2fc0601c7dee0a7129cfbc6da
Merge: 679e9d7 ceff6f3
Author: Eric Firing <ef...@ha...>
Date: Mon May 21 20:24:17 2012 -0700
 Merge pull request #884 from endolith/patch-3
 some typo fixes and small changes to the matplotlibrc stuff
commit cb92e314f1f7014c33cc85026dce11d5fbae82e5
Author: Eric Firing <ef...@ha...>
Date: Mon May 21 16:41:53 2012 -1000
 Add wxversion-specific error message. Closes #885.
commit ceff6f349fad82bc9c1eea0fa01c36b68c81d93f
Author: endolith <end...@gm...>
Date: Mon May 21 19:35:52 2012 -0300
 some typos and small changes
 ("overwrite" = original file no longer exists. "override" = file
still exists, but we're ignoring what it says)
commit 7ee65ef991fc13cc41b305fb908e87ae15aab4aa
Author: endolith <end...@gm...>
Date: Mon May 21 18:52:16 2012 -0300
 typo
commit 679e9d7373e30a1233646fa3807f46b4e7980b82
Author: endolith <end...@gm...>
Date: Wed May 16 22:55:31 2012 -0300
 _bone_data was defined twice, and first is erroneous
commit 19ec80be5c7dd175af2a13c3f742435c0c4f6276
Author: endolith <end...@gm...>
Date: Wed May 16 23:10:48 2012 -0300
 fix two typos
commit 24dd1ec640a99175f6dd0e4aca124f95a1c470b8
Merge: 3127158 ec691a8
Author: Michael Droettboom <md...@gm...>
Date: Thu May 17 07:17:00 2012 -0700
 Merge pull request #878 from jkseppan/fix-precedence
 Fix a precedence bug in PathClipper
commit ec691a8e4b31810612c46fd4d0dcaec2d46a3234
Author: Jouni K. Seppänen <jk...@ik...>
Date: Thu May 17 10:13:19 2012 +0300
 Fix a precedence bug in PathClipper
commit 3127158af2f72b6dec69757de385ab0daf8c2e50
Merge: 7ef0826 f7be4f4
Author: Michael Droettboom <md...@gm...>
Date: Wed May 16 09:22:04 2012 -0700
 Merge pull request #873 from mdboom/clipping-bug
 Fix clipping bug interaction with MOVETOs [v1.1.x]
commit f7be4f4541b555b745d30ec93961446dc9283d93
Author: Michael Droettboom <md...@gm...>
Date: Wed May 16 11:22:47 2012 -0400
 Minor cleanup of test as suggested by @gsever
commit 7232c7fe629f1155eb05b3dc82df1bf35bf0f36e
Author: Michael Droettboom <md...@gm...>
Date: Wed May 16 09:28:22 2012 -0400
 Fix a bug (introduced by 4cd75cdf) where the clipping algorithm
only treats the first moveto as the start of all paths.
commit 7ef0826f26106c564d154922935b7797dc2afdf6
Author: Michael Droettboom <md...@gm...>
Date: Fri May 4 06:46:57 2012 -0400
 Remove repeated sentence.
commit b0d153e7261c37687b109b8e5742df904fc5a853
Merge: eb0ded7 390c1fb
Author: Michael Droettboom <md...@gm...>
Date: Fri Apr 27 10:27:05 2012 -0700
 Merge pull request #852 from mdboom/doc-building-deadlock
 regression on v1.1.x branch, doc build deadlocks
commit 390c1fb59252918f36b5ff6ee6df72cd23781ca4
Author: Michael Droettboom <md...@gm...>
Date: Fri Apr 27 13:00:25 2012 -0400
 Use an RLock to avoid deadlock when building docs as reported by
@juliantaylor in #852.
commit eb0ded729d732abe21daf4562c4f76034e16856f
Merge: 9a8b35e 71f1db8
Author: Michael Droettboom <md...@gm...>
Date: Fri Apr 20 12:32:58 2012 -0700
 Merge pull request #834 from pelson/marker_doc
 Extended marker documentation
commit 71f1db8b5c456552ede3b65b1cac44d2be718d5f
Author: Phil Elson <phi...@ho...>
Date: Fri Apr 20 15:27:12 2012 +0100
 Added #843's fix
commit 79b80aff39fc258c57f18670236b0d72f2c62c7e
Author: Phil Elson <phi...@ho...>
Date: Mon Apr 16 17:05:57 2012 +0100
 Fixed typos.
commit 3914e5d5805eede4ae91ee2a8f9815d53c67ab54
Author: Phil Elson <phi...@ho...>
Date: Mon Apr 16 15:59:10 2012 +0100
 Updated marker documentation & added example of using a Path with a marker.
commit 9a8b35e167c912333f54c6d68ade8bf2a060a1c9
Merge: c063a9f aa7e33d
Author: Michael Droettboom <md...@gm...>
Date: Tue Apr 17 05:53:08 2012 -0700
 Merge pull request #836 from mdboom/mathtext-prime
 mathtext-prime
commit aa7e33d5070b70aac8a809b03d67228c65fa1f12
Author: Michael Droettboom <md...@gm...>
Date: Mon Apr 16 18:50:37 2012 -0400
 Fix \prime vs. apostrophe issues. A bug was introduced in PR #54
where all primes got smaller. It turns out the correct fix is to keep
primes large, but make aprostrophe equivalent to ^{\prime}.
commit c063a9fb7c9051cbc0f8e8e31c2730bda3156237
Merge: f562883 c36edf4
Author: Michael Droettboom <md...@gm...>
Date: Sun Apr 15 17:54:24 2012 -0700
 Merge pull request #793 from mdboom/mono_fonts
 Mono fonts
commit f5628835953742eb0265b58e5c157f87ba9f1664
Merge: 376dcb8 a00bcfc
Author: Michael Droettboom <md...@gm...>
Date: Sat Apr 14 12:50:20 2012 -0700
 Merge pull request #824 from mdboom/test-progress
 Tests don't display progress
commit 376dcb8be888bee16adb1b11c0b2137c9c934334
Merge: fe1e48a 4cd75cd
Author: Jouni K. Seppänen <jk...@ik...>
Date: Fri Apr 13 13:18:59 2012 -0700
 Merge pull request #817 from jkseppan/issue-804
 If path clipping introduces MOVETO operations, change final
CLOSEPOLY to LINETO
commit fe1e48aa775dd1c37334b1be8101a15eb65b3166
Merge: 1d55641 a00e510
Author: Michael Droettboom <md...@gm...>
Date: Fri Apr 13 09:46:06 2012 -0700
 Merge pull request #798 from jdh2358/class-font-cache
 use class level rather than instance level caching of fontd
commit 1d556413fd3e4ae32da5e98b4a76d9066e3f8c96
Merge: 8c6c24a 04442b9
Author: Michael Droettboom <md...@gm...>
Date: Fri Apr 13 09:12:32 2012 -0700
 Merge pull request #797 from jdh2358/backport-sliderfix
 Backport sliderfix
commit a00bcfc708f202de271531d5e8a03604bb39b13e
Author: Michael Droettboom <md...@gm...>
Date: Fri Apr 13 11:35:39 2012 -0400
 Display progress of tests
commit 4cd75cdf87361a5995cf3de7569ee87c94addbcc
Author: Jouni K. Seppänen <jk...@ik...>
Date: Fri Apr 6 17:50:07 2012 +0300
 Fix issue #804 by altering path clipping
commit 8c6c24aeead41aacf25818e074a74703e0890458
Merge: c5593ee b6f2b63
Author: Benjamin Root <ben...@gm...>
Date: Sat Mar 31 14:18:14 2012 -0700
 Merge pull request #809 from jenshnielsen/zticks
 Fix get_zticks and docs
commit b6f2b637bc77b99ee68f9e9380d72cd2ceb04cbb
Author: Jens H. Nielsen <jen...@gm...>
Date: Sat Mar 31 21:06:47 2012 +0200
 mplot3D: Change get_zticks to match get_xticks and get_yticks
commit a00e510e7f3bcb113a55b47469a68f35b6b7c16b
Author: John Hunter <jd...@gm...>
Date: Sat Mar 24 16:46:01 2012 -0500
 use threading Lock to protect class level font cache
commit cc628ceb492d756194310788e3aaba5364b491d0
Author: John Hunter <jd...@gm...>
Date: Sat Mar 24 16:20:57 2012 -0500
 slurp down a class level cache into the instance level at the
start of draw, and push it back up when done
commit aa4bb8aa08e06fb3faa464f4f056ecd7faa7d0f5
Author: John Hunter <jd...@gm...>
Date: Fri Mar 23 23:42:27 2012 -0500
 use class level rather than instance level caching of fonts to
delay the too many open file handles windows bug
commit 04442b9623d90865b34b93b7160680e95e8dd70d
Author: John Hunter <jd...@gm...>
Date: Fri Mar 23 23:26:33 2012 -0500
 finish backport of pr 575 for slider fix
commit c36edf47cff7b218da77fc63c2a3c6e0e14be0b2
Author: Michael Droettboom <md...@gm...>
Date: Fri Mar 23 06:52:56 2012 -0400
 Fix mono font rendering -- characters are now correctly
superimposed. Primarily affects mathtext.
commit c5593eea91d82559c6e30e999635b93a35a13bc9
Merge: e101dfa 9246b54
Author: John Hunter <jd...@gm...>
Date: Thu Mar 22 20:33:27 2012 -0500
 Merge branch 'v1.1.x' of github.com:matplotlib/matplotlib into v1.1.x
commit e101dfa2b8409e0a9b6bdd8085732bdb8a4e4349
Author: John Hunter <jd...@gm...>
Date: Thu Mar 22 20:29:17 2012 -0500
 update version strings for release candidate v1.1.1rc
commit 9246b54f8918273ec3c5b8fa9a1647c42a50c70c
Merge: 5846304 47a29b2
Author: Michael Droettboom <md...@gm...>
Date: Thu Mar 22 18:00:17 2012 -0700
 Merge pull request #769 from mdboom/gtk-warning
 GTK Warning message emitted when interactively saving figure
commit 58463049098bd20ed507f4a68e03e22bb3ff7cab
Merge: 1a79b95 45f42d2
Author: Michael Droettboom <md...@gm...>
Date: Thu Mar 22 16:55:12 2012 -0700
 Merge pull request #779 from mdboom/test-triage
 Fix failing tests on maintenance branch
commit 45f42d2f48d587761a5b6dd7073afe41a550aaa1
Author: Michael Droettboom <md...@gm...>
Date: Thu Mar 22 19:46:23 2012 -0400
 Make tests work remotely
commit e27c7c40b1f781937d10dcb3c75cee7ad039c9fe
Author: Michael Droettboom <md...@gm...>
Date: Thu Mar 22 19:24:38 2012 -0400
 Mark delaunay tests as needing a specific range of freetype versions.
commit f22547cfeb7d48c8d16aa7efe0759ac0020ef38c
Author: Michael Droettboom <md...@gm...>
Date: Thu Mar 22 19:22:40 2012 -0400
 Add test_delaunay and test_legend to the set of tests.
commit 8f111bd57de1fcdc0122b3e251630869b7249d51
Author: Michael Droettboom <md...@gm...>
Date: Thu Mar 22 18:54:29 2012 -0400
 Mark 4 failing tests with old freetype versions
commit 1a79b95bce5f27cc6ed9b18d959588521abb4241
Merge: cb396f2 7bf6a11
Author: John Hunter <jd...@gm...>
Date: Thu Mar 22 13:37:54 2012 -0700
 Merge pull request #741 from jdh2358/mdhoon-macosx
 macosx fixes
commit 3b0c9a719184e49126a5b2821a44ba727abffd67
Author: Michael Droettboom <md...@gm...>
Date: Tue Mar 20 11:07:49 2012 -0400
 Fix failing tests. The reasons for the failures were in the
following categories:
 - changes in the snapping algorithm that made the axes off by one pixel.
 - changes in text alignment.
 All the text in the baseline images is non-antialiased. This
seems to be more robust to differences across freetype versions. This
involved the addition of a new rcParam 'text.antialised', used only by
the Agg backend.
 Additionally, some freetype-related differences still cause
failures. For those, we mark the tests as known fail if the user has
a version of freethe versions that we expect to worvesions were
determined using T. Robitaille's freetype differences testing tool
here:
 https://github.com/astrofrog/freetype_version_testing
 Fixes a bug in the SVG backend's Gouraud shading.
 Force the use of the Agg backend for testing, and restore the old
backend afterward.
commit cb396f2b672dfbecce4aff3d81df7b281ec2855f
Author: Michael Droettboom <md...@gm...>
Date: Tue Mar 20 09:57:29 2012 -0400
 Fix git mistake
commit 04a69f01d9711984a95df4eff5e227f1f5155033
Merge: 7993d0f 6065e0c
Author: Michael Droettboom <md...@gm...>
Date: Tue Mar 20 09:56:16 2012 -0400
 Merge branch 'v1.1.x' of github.com:matplotlib/matplotlib into v1.1.x
commit 7993d0f0ffeb30a674be97325850d215180188f2
Author: Michael Droettboom <md...@gm...>
Date: Tue Mar 20 09:54:17 2012 -0400
 Fix in last commit: Move to the 'else' block of the try
commit 47a29b28f7d8c122a2ab463d28ed73d82f4289c5
Author: Michael Droettboom <md...@gm...>
Date: Tue Mar 20 09:33:30 2012 -0400
 Hide the warning when saving a file to a new filename in the Gtk
backend. Issue #769
commit 6065e0c64fc4141be6ba0775b9359b0d93e74ccb
Merge: aa5da2e a389e99
Author: Michael Droettboom <md...@gm...>
Date: Tue Mar 20 06:04:17 2012 -0700
 Merge pull request #777 from mdboom/callback-registry
 Fix removal of callbacks so they can be readded later
commit a389e99291503f15ba28d8cafa172819bba99453
Author: Michael Droettboom <md...@gm...>
Date: Tue Mar 20 09:02:15 2012 -0400
 Fix removal of callbacks so they can be readded later
commit aa5da2e098626b5c3a2ef99b9018787922482c84
Author: cgohlke <cg...@uc...>
Date: Wed Nov 16 13:47:10 2011 -0800
 Fix: 3D axes planes are drawn as triangles
commit d52c7ab298481181d8fbfe418f3bd660664fd875
Merge: 071a0b8 cbef0cc
Author: Eric Firing <ef...@ha...>
Date: Sat Mar 17 09:26:40 2012 -1000
 Merge branch 'v1.1.x' of github.com:matplotlib/matplotlib into v1.1.x
commit cbef0cc0f3631558ba76ede8d0d96235ba90b1fd
Merge: 07929d4 5865c06
Author: Benjamin Root <ben...@gm...>
Date: Sat Mar 17 12:25:20 2012 -0700
 Merge pull request #765 from WeatherGod/docfixes_1.1.1
 Massive doc-style work, focused upon axes.py.
commit 5865c06683ff5de0e84222107d3cdbf8b7b3c092
Merge: 8ebc370 e85d8d4
Author: Benjamin Root <ben...@gm...>
Date: Sat Mar 17 12:24:15 2012 -0700
 Merge pull request #2 from jdh2358/WeatherGod-docfixes_1.1.1
 Weather god docfixes 1.1.1
commit 8ebc3702b78c571f25660e2be0e3ae56ba4f3bb0
Author: Ben Root <ben...@gm...>
Date: Sat Mar 17 14:19:57 2012 -0500
 Some more doc fixes for quiver.py
commit 071a0b8c4e8270cc9822a6e15a8fce40688540dd
Author: Yann Tambouret <y.t...@gm...>
Date: Thu Jan 19 15:00:15 2012 -0500
 _init() was not accessible because expected _init(self)
commit 07929d417790eadb82a87e987807f424e47d92da
Merge: cb94a60 aa5bdbe
Author: Benjamin Root <ben...@gm...>
Date: Sat Mar 17 11:46:13 2012 -0700
 Merge pull request #762 from WeatherGod/mplot3d/collection_cmap_fix
 Mplot3d/collection cmap fix
commit cb94a60615d1189e9666f7050b4c9c3fc8b26701
Merge: ce32dd2 1deb317
Author: Benjamin Root <ben...@gm...>
Date: Sat Mar 17 11:45:00 2012 -0700
 Merge pull request #752 from WeatherGod/mplot3d/cla_fix
 mplot3d/cla fix
commit ce32dd2502ff3acc5d647c8fd0a47a86e7f014d0
Merge: 389670a b00d883
Author: Eric Firing <ef...@ha...>
Date: Sat Mar 17 11:44:05 2012 -0700
 Merge pull request #739 from leejjoon/tight-bbox-all-texts-v1.1.x
 savefig with bbox_inches='tight' takes account of all text artists
(against v1.1.x)
commit 389670a788f1af277a9b085006d124bb42bfa660
Merge: d58bcce 80cdde2
Author: Eric Firing <ef...@ha...>
Date: Sat Mar 17 11:22:08 2012 -0700
 Merge pull request #772 from jdh2358/slider-polyfix
 Slider polyfix
commit 80cdde25522e5b3708d64dff0dbc95ca3efb2177
Author: John Hunter <jd...@gm...>
Date: Sat Mar 17 11:16:11 2012 -0500
 fix slider polygon on move; this is already fixed in master
commit e85d8d473760f7079f3c780768b4c1857ce37b29
Author: John Hunter <jd...@gm...>
Date: Sat Mar 17 08:46:49 2012 -0500
 fix remainging sphinx errs/earnings for sankey
commit a9e32abe6173e1205123d1db8225853aa92116e9
Author: John Hunter <jd...@gm...>
Date: Sat Mar 17 08:27:30 2012 -0500
 fix some warnings and errors in sankey docstrings
commit d58bccef5e7d084f22755cff20008ef22eea74c6
Merge: 502974c 71a9e15
Author: Eric Firing <ef...@ha...>
Date: Fri Mar 16 22:31:32 2012 -0700
 Merge pull request #753 from efiring/cohere_pairs_bug
 Cohere pairs bug
commit 713e0bc71794fb3029429e0d59d437c0789a79c9
Author: Ben Root <ben...@gm...>
Date: Fri Mar 16 12:29:05 2012 -0500
 Fix missed apostraphe
commit 502974c74e0d30f8dd02b5f815f06c19ae31a645
Merge: cfd50c8 7b9916d
Author: Benjamin Root <ben...@gm...>
Date: Wed Mar 14 12:10:54 2012 -0700
 Merge pull request #705 from mdboom/alpha_pdf
 Problem with images and alpha in pdf when viewed in adobe
commit d0399c3de4709af29e661820a332d85b5411193c
Author: Ben Root <ben...@gm...>
Date: Wed Mar 14 13:21:56 2012 -0500
 Massive doc-style work, focused upon axes.py.
 Also added entry in index.html for 'subplots'.
commit aa5bdbed2c586b580840ec35d20e67aabb67f2d6
Author: Ben Root <ben...@gm...>
Date: Tue Mar 13 11:52:31 2012 -0500
 Fix scatter3d bug
 * Found a simple solution to the "colors disappear after interacting with
 a scatter3d plot" bug. Should close #761 and close #152.
commit 65828b5de13aa28329b36d4c8bc781089e359aa9
Author: Tony S Yu <ts...@gm...>
Date: Sat Mar 10 18:29:18 2012 -0500
 Fix bug when resizing qt4 figure window.
 Resizing window didn't account for toolbar and status bar heights.
commit cfd50c87f6d41b319bc98ef68cfdf991e44594ff
Merge: 332faa6 30dcee5
Author: Eric Firing <ef...@ha...>
Date: Fri Mar 9 21:49:02 2012 -0800
 Merge pull request #755 from tonysyu/fix-color-name-v1.1.x
 Rename 'lightgrey' color to 'lightgray'.
commit 30dcee5f9b4344ba7104b6c0e77d500010acbfe3
Author: Tony S Yu <ts...@gm...>
Date: Fri Mar 9 23:58:48 2012 -0500
 Rename 'lightgrey' color to 'lightgray'.
 Note 'lightgrey' is added later by a loop which adds
British-equivalent units.
commit 71a9e15cbb49015b4a92f751558c1fb3faeecae7
Author: Eric Firing <ef...@ha...>
Date: Fri Mar 9 08:36:18 2012 -1000
 BUG: specify axis for np.mean() in mlab.cohere_pairs
 This bug probably resulted from a change long ago in the
 numeric/numpy history in which the default behavior of mean()
 changed from operating over the first axis to operating over
 the entire array.
commit 1deb3176ee138e34d6c49cfc734912e72a893edf
Author: Ben Root <ben...@gm...>
Date: Fri Mar 9 10:57:50 2012 -0600
 Don't disable mouse interaction upon call to cla() in mplot3d
commit 332faa670ae21a21b3373a4d85340292e901cd77
Merge: a970aff 4042514
Author: John Hunter <jd...@gm...>
Date: Thu Mar 8 05:35:19 2012 -0800
 Merge pull request #716 from jdh2358/qt-close
 Fixes Qt close bug
commit 7bf6a11754a5922784b8b55f63372c9e7cc1daf7
Author: jdh2358 <jd...@gm...>
Date: Mon Mar 5 08:43:08 2012 -0600
 added Michiel's macosx patch
commit b00d883e52ccaeb8cfd2821cc039996e431631c1
Author: Jae-Joon Lee <lee...@gm...>
Date: Tue Jan 31 11:43:08 2012 +0900
 remove renderer parameter from get_default_bbox_extra_artists methods
commit d8e4b95fcca613d585071835fb8849b131ed6389
Author: Jae-Joon Lee <lee...@gm...>
Date: Tue Jan 31 11:39:35 2012 +0900
 include legends as default_bbox_extra_artists
commit 016f2453bd08dba759fc5ba08d4283bacd77a0f7
Author: Jae-Joon Lee <lee...@gm...>
Date: Mon Jan 30 13:36:36 2012 +0900
 savefig with bbox_inches='tight' takes account of all text artists
commit a970aff9dd00e7d9755c80dc5dce448c957ba68e
Merge: c803773 1262326
Author: Michael Droettboom <md...@gm...>
Date: Sun Mar 4 07:13:01 2012 -0800
 Merge pull request #734 from mdboom/pixel_marker
 Further refinement of marker placement and snapping.
commit c8037733326f5968a38815401d4cae7a1dfe05c3
Merge: 61b1034 755890d
Author: Michael Droettboom <md...@gm...>
Date: Thu Mar 1 08:16:38 2012 -0800
 Merge pull request #735 from rhattersley/fix-empty-wedge-vertices
 Fix empty wedge vertices
commit 1262326c00074fb497816242c9aa0e7787bd5cda
Author: Michael Droettboom <md...@gm...>
Date: Thu Mar 1 10:52:54 2012 -0500
 Further refinement of marker placement and snapping.
 Since paths (particularly marker paths, which are centered at (0,
0)) can cross the origin, it is better to round using floor() than
round() (which rounds toward 0).
 Markers are placed correctly with respect to the snapping of the
axes that contains them.
 The clipbox calculation has been adjusted to match the snapping of
the axes rectangle.
commit 755890ddae43399c7c2d060644d71d8e32bea72b
Author: Richard Hattersley <rha...@gm...>
Date: Thu Mar 1 15:45:52 2012 +0000
 Fix uninitialised vertices in Path.arc with is_wedge=True.
commit 61b1034987857081aebe64e43386ffdbd132f3ba
Merge: e270359 cb89dfb
Author: Ben Root <ben...@gm...>
Date: Wed Feb 29 13:20:09 2012 -0600
 Merge branch 'PhilipElson-doc_tweaks_maint' into v1.1.x
commit e270359aa2bd122a098790e828ff8db3cf781c64
Merge: eb95530 b05aa16
Author: Michael Droettboom <md...@gm...>
Date: Wed Feb 29 10:20:59 2012 -0800
 Merge pull request #695 from mdboom/pixel_marker
 Fix single pixel markers
commit b05aa16106b25fadb127ea1f96516c916b664a72
Author: Michael Droettboom <md...@gm...>
Date: Wed Feb 29 13:14:41 2012 -0500
 Comment why the offset of the pixel rectangle is surprising.
commit 92e3b635e7d9c7a6909d6198bf613c3b7f5427a7
Author: Michael Droettboom <md...@gm...>
Date: Wed Feb 29 13:09:22 2012 -0500
 Fix typo.
commit cb89dfb7b74d309b1f824bca6b10dcc1477cda37
Merge: eb95530 c9d2210
Author: Ben Root <ben...@gm...>
Date: Wed Feb 29 10:06:35 2012 -0600
 Merge branch 'doc_tweaks_maint' of
https://github.com/PhilipElson/matplotlib into
PhilipElson-doc_tweaks_maint
commit 752ad0e3203da53d1730e5d73e5ee057f68e553b
Author: Michael Droettboom <md...@gm...>
Date: Wed Feb 29 10:45:42 2012 -0500
 Another attempt at getting pixel markers to work correctly.
commit fabf327b03bb162b009be0e4945a0d11ca10f14d
Author: Michael Droettboom <md...@gm...>
Date: Wed Feb 29 10:44:25 2012 -0500
 Respect stroke width on markers in the Ps backend
commit 342007cb99ff7d5532e4e16aa674bd35cf229c91
Author: Jae-Joon Lee <lee...@gm...>
Date: Wed Feb 29 17:00:01 2012 +0900
 add offset of 0.5 when marker is stroked so that snapping works
better in agg backend
commit 6fa0064a192254337946161ff347e250b4409418
Author: Michael Droettboom <md...@gm...>
Date: Mon Feb 6 14:26:16 2012 -0500
 Fix single pixel markers. The pixel shape is now optimized so it
does the right thing in the Agg backend. For raster backends,
linejoin and cap styles is now correctly passed to and used in the
backend.
commit c9d2210cfde65fc962de96fea2b761c51f21fb9f
Author: Phil Elson <phi...@ho...>
Date: Tue Feb 28 09:26:50 2012 +0000
 Misc doc changes applied to the maintenance branch.
commit eb955306c1cbecd9bb44dfc174e21b2480d9afea
Merge: 7c72db9 04cd651
Author: John Hunter <jd...@gm...>
Date: Mon Feb 27 14:25:51 2012 -0800
 Merge pull request #680 from mdboom/polar-rpad
 polar axes labels error with small radial range
commit 04cd6516b04655c8178b478a5cbad55c3f608d4d
Author: jdh2358 <jd...@gm...>
Date: Mon Feb 27 15:51:15 2012 -0600
 add new baseline images for polar radial tick label position changes
commit 7c72db931f666c6fb244548d95a7cb6f47448e4f
Merge: 01627ce 3b0f595
Author: Michael Droettboom <md...@gm...>
Date: Mon Feb 27 07:23:22 2012 -0800
 Merge pull request #713 from mdboom/clang-fixes
 Clang fixes
commit 01627cec57c1ecba10ea46805917ce6cc51cfccb
Merge: 9c676df 87e2e2c
Author: John Hunter <jd...@gm...>
Date: Sun Feb 26 12:37:06 2012 -0800
 Merge pull request #677 from jkseppan/issue-672
 Only call dirname on string-like directory names
commit 40425149559f3ad808c78d78a19212cc3ab6e9e6
Author: John Hunter <jd...@gm...>
Date: Sun Feb 26 07:07:38 2012 -0600
 fix qt close event bug
commit 3b0f5959bbea065b07538f9952ae520ab5a06c27
Author: Michael Droettboom <md...@gm...>
Date: Thu Feb 23 16:49:07 2012 +0000
 Fix compilation on clang
commit 7b9916d1658f405c17a4cda1ce62b8e861a68621
Author: Michael Droettboom <md...@gm...>
Date: Wed Feb 22 10:21:48 2012 -0500
 Fix alpha blending in PDF backend. This properly sets up a
transparency group for the page.
commit 9c676df833e03a77215f9fc6b3b5c6ad288c45f0
Merge: 97c58d2 0c8273f
Author: Michael Droettboom <md...@gm...>
Date: Tue Feb 7 10:28:38 2012 -0800
 Merge pull request #696 from mdboom/svg-duplicate-ids
 SVG output broken
commit 0c8273f7267eede1d8529efc5a30161e9983ddcc
Author: Michael Droettboom <md...@gm...>
Date: Tue Feb 7 09:49:37 2012 -0500
 Prevent duplicate marker ids
commit 97c58d2de0aa45de7891051a9e56abb3cda3014f
Author: Michael Droettboom <md...@gm...>
Date: Fri Feb 3 07:31:26 2012 -0500
 Convert tuple to list so it can be popped
commit ae4a308168281709594a90f93c4a687eb267d5fa
Merge: 7f3bac3 d41a7c0
Author: Michael Droettboom <md...@gm...>
Date: Mon Jan 23 08:52:56 2012 -0800
 Merge pull request #684 from mdboom/initial-moveto
 Fix 'Path lacks initial MOVETO'
commit b14aa60cdfae34c9f796ec07712d04898dca10ba
Author: Michael Droettboom <md...@gm...>
Date: Mon Jan 23 11:50:44 2012 -0500
 Fix bug in polar plots: if rmax - rmin was too small, the old rpad
padding heuristic broke down and sent the rlabels way off of the plot
axes. The new approach is to not have rpad, but to change the
alignment of the rlabels depending on the quadrant of the plot. This
seems to work quite well, but is perhaps slightly backward
incompatible.
commit d41a7c0643f7506b9948a56aa16665f9c3b688cb
Author: Michael Droettboom <md...@gm...>
Date: Mon Jan 23 09:51:23 2012 -0500
 Fix bug where a 0-length Path would cause a 'Path lacks initial
MOVETO' error
commit 87e2e2c98f79d60e5c6fce85ae14acd1ef525f06
Author: Jouni K. Seppänen <jk...@ik...>
Date: Mon Jan 16 23:37:38 2012 +0200
 Only call dirname on string-like directory names
commit 7f3bac300dcf7707be0065a8071400035ad87baa
Merge: 9aa1cb3 85a0071
Author: Jae-Joon Lee <lee...@gm...>
Date: Tue Jan 3 17:32:51 2012 -0800
 Merge pull request #634 from jenshnielsen/bbox_fix
 Pass bbox_to_anchor and bbox_transform from zoomed_inset_axes to
AnchoredZoomLocator
commit 9aa1cb36b2800c865a2f109f1ba8b474708014b7
Merge: f26ea29 bfb4998
Author: Jae-Joon Lee <lee...@gm...>
Date: Tue Jan 3 17:26:53 2012 -0800
 Merge pull request #635 from jenshnielsen/doc_up
 Legend guide: transform should be bbox_transform
commit f26ea29368ec79c613667255a0133790451dab6a
Author: cgohlke <cg...@uc...>
Date: Mon Nov 7 12:44:23 2011 -0800
 Fix TypeError: set_autoscalez_on() takes exactly 2 arguments (3 given)
commit d23f721a84d5ed03e948a9b6069fd855686b0e6d
Merge: bdc427a a62545d
Author: Eric Firing <ef...@ha...>
Date: Sun Jan 1 01:58:43 2012 -0800
 Merge pull request #630 from jenshnielsen/colorbar
 Plot Colorbar in axes_grid1 with pcolormesh
commit bdc427ab9c45ff6fab6f21ca751442b0c040aa35
Merge: 346615e bd5c5b4
Author: Eric Firing <ef...@ha...>
Date: Sat Dec 31 15:32:19 2011 -0800
 Merge pull request #540 from mdboom/issue540
 Raise a useful error message when there is no current image
commit 346615e4c4bfc246143f8406b7bd0adf4df073c6
Merge: 5ae97ba f611e03
Author: Eric Firing <ef...@ha...>
Date: Sat Dec 31 14:18:01 2011 -0800
 Merge pull request #648 from efiring/numpy_LooseVersion
 Numpy loose version
commit f611e03f0f65620b5136fd3770373c9d11f50e58
Author: Eric Firing <ef...@ha...>
Date: Sat Dec 31 12:09:55 2011 -1000
 numpy version check: use LooseVersion consistently
 There are two places where the version check is done, and my
 last changeset fixed only one of them. This time I am restoring
 the use of distutils.version, and using LooseVersion in
 both locations. It looks like it should work as well as "split"
 for the forseeable future.
commit 5ae97ba14974e0f1ddcc9359bcd7bc07a2fe0865
Merge: 6a02337 c5fd23d
Author: Jouni K. Seppänen <jk...@ik...>
Date: Sat Dec 31 12:00:39 2011 +0200
 Merge pull request #637 from Tony S Yu, cherry-picked onto v1.1.x
commit c5fd23dce61fccc05638f3ca0ca46312c39a6170
Author: Tony S Yu <ts...@gm...>
Date: Sat Dec 24 11:23:08 2011 -0800
 Add note about gridlines on polygon radar chart
commit 9d06afa4471c2a2f4b43a4716d995f81fa3a87c1
Author: Tony S Yu <ts...@gm...>
Date: Fri Dec 23 18:33:13 2011 -0800
 Clean up radar_chart example
commit 6d475ff824806c229533fd53b2d38177fe9aca4d
Author: Tony S Yu <ts...@gm...>
Date: Fri Dec 23 17:17:49 2011 -0800
 Fix radar_chart example.
 Radar chart broken when using polygon spines. This was broken when
the drawing of the axes spines was separated from the axes patch.
commit 6a0233782dc24d05843107716093516f055d37b2
Merge: 2410547 d450ca9
Author: Jouni K. Seppänen <jk...@ik...>
Date: Thu Dec 29 13:24:01 2011 -0800
 Merge pull request #645 from efiring/fix_numpy_version_check
 Fix numpy version check
commit d450ca9399b0c3120fc154dad8f8c031c1467649
Author: Eric Firing <ef...@ha...>
Date: Thu Dec 29 08:11:38 2011 -1000
 BUG: can't build with numpy development versions
 distutils.version has two Version classes, and neither one does
 what we need for numpy version checking. Simply splitting on
 the decimal point is adequate so long as the first three components are
 single digits. This is likely to remain the case for a long time.
commit 2410547d6f2a45dc54ba5daf52a318be25b39322
Merge: 2da9d8f 09293bf
Author: Eric Firing <ef...@ha...>
Date: Tue Dec 27 22:52:49 2011 -0800
 Merge pull request #639 from jkseppan/issue633
 Work around subprocess EINTR bug; fixes issue #633
commit 09293bf96f79f305d96ae4070dc89537efb9fb17
Author: Jouni K. Seppänen <jk...@ik...>
Date: Tue Dec 27 20:21:34 2011 +0200
 Work around subprocess EINTR bug; fixes issue #633
 The bug http://bugs.python.org/issue12493 is present in some Python
 versions.
 The _read_nointr function has been unused since b03a908 (it did
 not work on Windows).
commit bfb49988020e159b88396f6f81f0fe3e1f4b1154
Author: Jens H. Nielsen <jen...@gm...>
Date: Mon Dec 26 10:08:58 2011 +0100
 doc: transform should be bbox_transform
commit 85a007162f088b6e0467a54ab0307edea9415c6b
Author: Jens H. Nielsen <jen...@gm...>
Date: Sun Dec 25 21:04:14 2011 +0100
 Pass bbox_to_anchor and bbox_transform from zoomed_inset_axes to
AnchoredZoomLocator
commit a62545d8ff0b9c7f7c73cd93dc37f4a865c70809
Author: Jens H. Nielsen <jen...@gm...>
Date: Fri Dec 16 09:24:39 2011 +0100
 use pcolormesh instead of pcolor in axes_grid1 colorbar
 This is identical to the standard colorbar and removes artifacts
 in the pdf version of the plot.
commit 2da9d8fb5d087eaeb31c0af88141aafaf0716e9c
Merge: 3c3c466 585606f
Author: Eric Firing <ef...@ha...>
Date: Wed Dec 14 10:01:53 2011 -0800
 Merge pull request #627 from efiring/quiver_angle
 Quiver: copy input angles array to avoid side effects; fixes issue #625
commit 3c3c466564cba3d80f928a46857e54738787779b
Merge: 96caca8 fb52b96
Author: Michael Droettboom <md...@gm...>
Date: Wed Dec 14 06:10:26 2011 -0800
 Merge pull request #586 from mdboom/numpy-version-13
 Numpy version 1.4
commit 585606f7bd79b93cbaa9d538cbf537c82cb9a4a6
Author: Eric Firing <ef...@ha...>
Date: Tue Dec 13 07:53:54 2011 -1000
 Quiver: copy input angles array to avoid side effects; fixes issue #625
commit 96caca8dd48d08e3106337ecdeae82fa0236b86b
Author: Jae-Joon Lee <lee...@gm...>
Date: Wed Dec 7 23:03:56 2011 +0900
 fix the drawing order of lines and markers of the Errorbar legend_handler
commit 9ae8771444ad5a1ee7148199ccd802a037322337
Merge: bbc5e66 df4c96b
Author: Michael Droettboom <md...@gm...>
Date: Tue Dec 6 11:49:24 2011 -0800
 Merge pull request #611 from mdboom/test_all
 Test all
commit df4c96bd7ef3b51355a90b954c79ff93e6827c6e
Author: Michael Droettboom <md...@gm...>
Date: Tue Dec 6 13:56:51 2011 -0500
 Don't make an extra copy of the expected image outside of the
`result_images` directory.
commit d021ef037c6358b4fe136497ce0970c6a2bd214d
Author: Michael Droettboom <md...@gm...>
Date: Tue Dec 6 13:56:23 2011 -0500
 Don't call `sys.exit` if objc can't be imported. It makes it
impossible for nose to collect tests across all of matplotlib.
Addresses #571.
commit bbc5e667ee67ec026fc6ac0f833c6e65f28aaae3
Author: Michael Droettboom <md...@gm...>
Date: Tue Dec 6 13:46:51 2011 -0500
 Backport 98ee4e991ae142622f3814db193b75236eb77cea to v1.1.x branch
commit 0cfea91cb92e3051dfdfc952240ba2cec8d9685f
Author: Jae-Joon Lee <lee...@gm...>
Date: Mon Nov 28 23:05:05 2011 +0900
 fix side-effect of annotate that modifies the input dictionary
commit 23cdfaa13881b1edac1f2a7301c854352b595e63
Merge: 62073cf 050c0b1
Author: Michael Droettboom <md...@gm...>
Date: Mon Nov 28 06:19:46 2011 -0800
 Merge pull request #598 from efiring/fix_marker_edges
 lines.py: fix bugs in marker alpha and edge colors
commit 62073cfa10e9dcfc33361efb1965a39795d2575d
Merge: aa07d18 15e4c7f
Author: Michael Droettboom <md...@gm...>
Date: Mon Nov 28 04:28:39 2011 -0800
 Merge pull request #593 from mdboom/recursive_import
 recursive import : bug in cbook.unicode_safe
commit 050c0b1ee9ad9e4a771e6b960fc507f55d6d2fa2
Author: Eric Firing <ef...@ha...>
Date: Thu Nov 24 10:45:12 2011 -1000
 lines.py: fix bugs in marker alpha and edge colors
 Two bugs are fixed:
 1) plt.plot(np.arange(3),'ro', mec='none')
 was not plotting anything because 'none' was setting the
 edgecolor alpha to 0, and that alpha was being propagated
 to gc, overriding the face color. The 'none' case needs to
 be trapped, not passed on to the GraphicsContext.
 2) plt.plot(np.arange(3), 'r.')
 was drawing a black edge around the point; same for 'r,';
 the markers.py refactoring turned the point and pixel markers
 into filled markers, with their default black borders. The
 solution here was to special-case them in Line2D. They do
 need to be filled, with edges of the same color; otherwise
 the pixel can end up nearly invisible, and the point could
 end up as a donut.
commit 15e4c7fd4982e5ed2c88e9efe952e88b79ded31d
Author: Michael Droettboom <md...@gm...>
Date: Thu Nov 17 09:49:24 2011 -0500
 Avoid a recursive import problem in unicode_safe()
commit aa07d189029a1c37e2e04a9573a6a1e1bda9c7b1
Author: Jae-Joon Lee <lee...@gm...>
Date: Thu Nov 17 11:29:21 2011 +0900
 axes_grid1: fix colorbar not processing the ticks keyword properly
commit f6ebac99045624e981cd2786789e65b1ad3da39d
Merge: 04f1ef0 4e6b883
Author: Michael Droettboom <md...@gm...>
Date: Wed Nov 16 09:43:50 2011 -0800
 Merge pull request #566 from leejjoon/fix-fancy-style-annotation
 fix fancy-style annotation causing an exception when the connecting path
commit fb52b961a596c41fa2a1bb2dd85d7078f2ad39de
Author: Michael Droettboom <md...@gm...>
Date: Mon Nov 14 14:42:28 2011 -0500
 Put the minimum required version of Numpy in one place.
commit bf73b9088e0ce5e2dfcc5b2cac9a4f20515ed9f2
Author: Michael Droettboom <md...@gm...>
Date: Mon Nov 14 08:31:34 2011 -0500
 Update checks and documentation to refer to Numpy 1.4 as the
minimum Numpy version.
commit 04f1ef0a3f50e5b05afe473380ff79b69b0511f0
Merge: 29a43db b04c505
Author: Benjamin Root <ben...@gm...>
Date: Wed Nov 9 10:29:57 2011 -0800
 Merge pull request #573 from WeatherGod/mplot3d/issue569
 Fixed incorrect input to patch_2d_to_3d.
commit b04c505c10b296f425bc0c79e49c2ca0378bea13
Author: Ben Root <ben...@gm...>
Date: Wed Nov 9 12:24:48 2011 -0600
 Fixed incorrect input to patch_2d_to_3d.
 Thanks to github user kosma for spotting!
commit 29a43dbdc1193f6564795e216af2a7d20f3485c7
Merge: d2cba84 b624546
Author: Michael Droettboom <md...@gm...>
Date: Tue Nov 8 11:01:06 2011 -0800
 Merge pull request #539 from efiring/qt4agg_draw
 Qt4agg draw
commit d2cba849f473c961fc902a21b8b51f062bf161c2
Merge: 561c92c af9c4d7
Author: Michael Droettboom <md...@gm...>
Date: Tue Nov 8 06:39:55 2011 -0800
 Merge pull request #408 from mdboom/issue408
 Small issue with hist (probably in mac os x backend)
commit 561c92c3dce6f1a50b424b32a261446ca028eae1
Merge: 0b5ef9c 6d7c930
Author: Michael Droettboom <md...@gm...>
Date: Tue Nov 8 06:38:10 2011 -0800
 Merge pull request #556 from dhyams/v1.1.x-dhyams
 Added a contains() method to matplotlib.legend.Legend().
commit 0b5ef9cab778d87780aa9b93d5015f8ad75a0269
Merge: 4cf63e7 46ed28d
Author: Michael Droettboom <md...@gm...>
Date: Tue Nov 8 06:37:05 2011 -0800
 Merge pull request #562 from WeatherGod/docfix/missing_sankey
 Fix docs to include sankey api docs.
commit 4cf63e7b5bf9906a992313134454a1fad62e82d3
Author: Stefan van der Walt <st...@su...>
Date: Mon Oct 31 02:37:48 2011 -0700
 In csv2rec, ensure that each record passed to numpy's fromrecords
has the same number of elements.
commit 257036ed96ef10b272891091aa312417038b55f4
Merge: 0121b98 7bca1b9
Author: Michael Droettboom <md...@gm...>
Date: Tue Nov 8 05:44:04 2011 -0800
 Merge pull request #546 from mdboom/issue543
 Issue543
commit 0121b9821de3008ad29b4d608799ac82500779c1
Merge: 1d6b55d cd901c6
Author: Michael Droettboom <md...@gm...>
Date: Tue Nov 8 05:43:22 2011 -0800
 Merge pull request #544 from mdboom/issue544
 wx resize bug
commit 1d6b55d881fe28336a5d2ea5be48b2df6b14778a
Author: Jae-Joon Lee <lee...@gm...>
Date: Tue Oct 18 10:50:37 2011 +0900
 Figure.legend does not flatten the input handle list
commit 4e6b8830479933405b9500525e516c930b0c2e44
Author: Jae-Joon Lee <lee...@gm...>
Date: Thu Nov 3 20:46:39 2011 +0900
 fix fancy-style annotation causing an exception when the
connecting path is too short
commit 46ed28d5863aaf1d9da94c394697e965eb2c185b
Author: Ben Root <ben...@gm...>
Date: Sun Oct 30 16:36:13 2011 -0500
 Fix docs to include sankey api docs.
commit 46d0db514c315d4ab8fbbacb9b03da23a4fee157
Author: Michael Droettboom <md...@gm...>
Date: Fri Oct 28 15:24:13 2011 -0400
 codes array must be of self.code_type dtype
commit 0ec7c7ef541f3b4304fc2e13aca057dff5ae0f6f
Merge: 6dd8aac 1dac36d
Author: Michael Droettboom <md...@gm...>
Date: Fri Oct 28 10:25:52 2011 -0700
 Merge pull request #545 from mdboom/alpha_image_resize_bug
 Broken alpha handling in images
commit 6dd8aacf1ffe7687de0787e269c52929e2d01e98
Merge: 453138f fbf419b
Author: Michael Droettboom <md...@gm...>
Date: Thu Oct 27 11:17:12 2011 -0700
 Merge pull request #559 from mdboom/arrow_bug
 arrow_bug
commit 453138feacefab6084d413535170a05eb3455515
Merge: bb99462 f2341b5
Author: Michael Droettboom <md...@gm...>
Date: Thu Oct 27 10:30:17 2011 -0700
 Merge pull request #521 from mdboom/pyside_info
 Check for pyside in setupext.py
commit fbf419b251bb8c9ebccbfc1146e3510068334a8a
Author: Michael Droettboom <md...@gm...>
Date: Thu Oct 27 12:49:37 2011 -0400
 Fix bug where arrow paths were not being closed correctly with a
CLOSEPOLY command. (Showed up only in PDF output). Reported by
moglii
commit 6d7c9304e23e89e100434155863655d4d1d52891
Author: Daniel Hyams <dh...@gm...>
Date: Wed Oct 26 21:38:19 2011 -0400
 Added a contains() method to matplotlib.legend.Legend(). It was
 missing previously.
commit bb9946260e44e3faa2611bf781e56609320bc0d8
Author: Michael Droettboom <md...@gm...>
Date: Tue Oct 25 09:50:27 2011 -0400
 backend_qt4: avoid a crash at exit with PySide. Closes #551.
commit cd901c6d8eb653a0c8567d0deeac780fefce5ae5
Author: Michael Droettboom <md...@gm...>
Date: Mon Oct 24 11:37:12 2011 -0400
 Fix bug where the wx window can not be sized down from its initial size.
commit 1dac36d829a8737741e1b223049042a4bc096070
Author: Michael Droettboom <md...@gm...>
Date: Fri Oct 21 09:34:11 2011 -0400
 Tell Agg that we're giving it pre-multiplied image data
commit e406c05bd0c4ae9b0d6cc5aef5771740db0db240
Author: Michael Droettboom <md...@gm...>
Date: Mon Oct 24 11:00:18 2011 -0400
 Make "set_alpha()" work on images. Now, alpha blending is handled
in the backends. Tested and works on Agg, Pdf and Svg. (Ps does not
support alpha).
commit 7bca1b98d0841b492dc9d8f4cc50d73fb47bb4f8
Author: Michael Droettboom <md...@gm...>
Date: Fri Oct 21 15:03:49 2011 -0400
 Add rcParams xtick.major.width and friends to control the tick width.
commit f2341b535ccd019c710df671feb7cd8ad2646ff6
Author: Michael Droettboom <md...@gm...>
Date: Fri Oct 21 14:12:54 2011 -0400
 Display information about the version of PySide installed from setup.py
commit bd5c5b4e1a5cac9b18061e79ad92dc2fb97e86c5
Author: Michael Droettboom <md...@gm...>
Date: Fri Oct 21 10:54:02 2011 -0400
 Raise a useful error message when colorbar() is called with no
current image. Closes #540.
commit af9c4d751b3546b845ebb6ea183208d48ff62229
Author: Michael Droettboom <md...@gm...>
Date: Fri Oct 21 10:31:29 2011 -0400
 Don't pixel snap histogram step lines. It makes them not align
properly with smoothed curves. Closes #408.
commit 622d24ee4455c4f31cd9aa7afe9f556cdd7b11b8
Author: Michael Droettboom <md...@gm...>
Date: Fri Oct 21 09:48:40 2011 -0400
 Add a test for issue #543
commit 1d9cbddef370608afb91b173eb244ab7fc731a44
Author: Michael Droettboom <md...@gm...>
Date: Fri Oct 21 09:44:13 2011 -0400
 Tick marker size should follow grid.linewidth, not
lines.markeredgewidth. Closes #543
commit d66487928df107865f73d2e32d7f7306ff123a20
Merge: 93e4d19 fc30d92
Author: Michael Droettboom <md...@gm...>
Date: Wed Oct 19 11:20:13 2011 -0700
 Merge pull request #541 from mdboom/issue520
 Issue520
commit fc30d9246e69c608f77c734acc0d244c58a24a9a
Author: Michael Droettboom <md...@gm...>
Date: Tue Oct 18 15:39:41 2011 -0400
 Fix inclusion of source code in the documentation build. Closes #520.
commit b624546ae60dc5878e75a32f41a160d383548b8f
Author: Eric Firing <ef...@ha...>
Date: Tue Oct 18 08:06:21 2011 -1000
 backend_qt4agg: draw() immediately calls FigureCanvasAgg.draw()
 This is the latest in a series of modifications to the Qt4Agg
 drawing strategy going back several years. It simplifies the
 code and should solve the problem introduced in 6938b0025; that
 is, delaying the Agg draw operation until the paintEvent breaks
 code expecting that draw operation to have occurred immediately.
 The problem was reported here:
 http://sourceforge.net/mailarchive/message.php?msg_id=28245744
commit 93e4d19884f32493fc90b226b0ad059f0c829ccd
Author: Christoph Gohlke <cg...@uc...>
Date: Tue Oct 18 07:56:36 2011 -0500
 windows x64 support in _tkagg.so
commit 37e492ef4f010859041504c562fe03ebeba293a3
Merge: 124bbe8 2438af2
Author: John Hunter <jd...@gm...>
Date: Tue Oct 18 05:49:20 2011 -0700
 Merge pull request #528 from jdh2358/figure-animated2
 Figure animated2
commit 124bbe8eee810dccb3006edd20ab2c7a4648ebb6
Merge: 2154b32 96033e6
Author: John Hunter <jd...@gm...>
Date: Tue Oct 18 05:49:09 2011 -0700
 Merge pull request #527 from jdh2358/reorder-ttconv
 Reorder ttconv
commit 2154b32c72226783258272f4f91677ae4e36d5bd
Author: Ian Thomas <ian...@gm...>
Date: Tue Oct 18 07:48:11 2011 -0500
 fix triangulation typo
commit 2438af2bae0a9e723d780da9d94e5fad41f7a46b
Author: John Hunter <jd...@gm...>
Date: Sat Oct 15 11:26:13 2011 -0500
 support animated property on figure elements
commit 96033e6e0346057c727f858f5eb9ccbffbce11d3
Author: jdh2358 <jd...@gm...>
Date: Fri Oct 14 14:18:55 2011 -0500
 reorder imports in ttconv to work around portland group compiler
issue (see issue #526)
commit 9aa0bc6e92795efb37c0a2e16f238b1bad513484
Author: jdh2358 <jd...@gm...>
Date: Thu Oct 13 17:55:06 2011 -0500
 fix index sidebar
commit ffa5c08f10719cd53230a7b74d176ff21e6b3ab1
Author: Jeff Whitaker <js...@fa...>
Date: Thu Oct 13 13:44:50 2011 -0600
 update Basemap URL to point to github instead of sourceforge
JDH

Hi, Thanks Fernando! I am using vim and I checked a little bit the tool and
it seems of great help!
I am not saying that we need something perfect. It's already great to have
these tools (ipython, matplotlib). Just imagine what's kind of feeling
working within pure python shell... thanks for these great work.
Chao
Fernando Perez wrote:
> 
> On Mon, Jun 11, 2012 at 2:05 PM, wiswit <cha...@gm...> wrote:
>> While in emacs or vim, you cannot simple select lines and execute them,
>> so
>> you have to frequently copy and code and use %cpaste or %paste to paste
>> the
>> code.
> 
> In emacs you can activate ipython in your emacs.el file and then you
> can send arbitrary snippets you highlight, with C-c |. In vim, Paul
> Ivanov's vim-ipython integration
> (https://github.com/ivanov/vim-ipython) gives even more powerful and
> detailed control.
> 
> Not saying the issues being discussed don't exist, but we do have some
> tools to partially address them (the questions about the MPL api are
> obviously beyond IPython's control).
> 
> Cheers,
> 
> f
> 
> ------------------------------------------------------------------------------
> Live Security Virtual Conference
> Exclusive live event will cover all the ways today's security and 
> threat landscape has changed and how IT managers can respond. Discussions 
> will include endpoint security, mobile security and the latest in malware 
> threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/
> _______________________________________________
> Matplotlib-users mailing list
> Mat...@li...
> https://lists.sourceforge.net/lists/listinfo/matplotlib-users
> 
> 
-- 
View this message in context: http://old.nabble.com/What-is-your-matplotlib-workflow--tp33987463p34000000.html
Sent from the matplotlib - users mailing list archive at Nabble.com.

Neal Becker wrote:
> Any ideas what this is about?
> 
> No traceback, just this message:
> 
> Exception RuntimeError: 'sys.meta_path must be a list of import hooks' in
> <bound method plot.__del__ of <__main__.plot object at 0x2cf5c10>> ignored
> 
Maybe I found it. I had an object managing my plot, which had a __del__ which 
called pdf.close(). Probably this destructor was called too late. I now 
explicitly call del on my object, and the problem is gone.

Any ideas what this is about?
No traceback, just this message:
Exception RuntimeError: 'sys.meta_path must be a list of import hooks' in <bound 
method plot.__del__ of <__main__.plot object at 0x2cf5c10>> ignored

operating system Windows 7
matplotlib version : 1.1.0
obtained from sourceforge
the class seems to generate the same Wt matrix for every input. The
every element of the weight matrix is either +sqrt(1/2) or -sqrt(1/2).
dat1 = 4*np.random.randn(200,1) + 2
dat2 = dat1*.25 + 1*np.random.randn(200,1)
pcaObj1 = PCA(np.hstack((dat1,dat2)))
print pcaObj1.Wt
dat3 = 2*np.random.randn(200,1) + 2
dat4 = dat3*2 + 3*np.random.randn(200,1)
pcaObj2 = PCA(np.hstack((dat1,dat2)))
print pcaObj2.Wt
The output Y seems to be correct, and the projection function works.
only the Wt matrix seems to be messed up. Am I using this class
incorrectly, or could this be a bug?
thanks,
Justin

On Mon, Jun 11, 2012 at 2:05 PM, wiswit <cha...@gm...> wrote:
> While in emacs or vim, you cannot simple select lines and execute them, so
> you have to frequently copy and code and use %cpaste or %paste to paste the
> code.
In emacs you can activate ipython in your emacs.el file and then you
can send arbitrary snippets you highlight, with C-c |. In vim, Paul
Ivanov's vim-ipython integration
(https://github.com/ivanov/vim-ipython) gives even more powerful and
detailed control.
Not saying the issues being discussed don't exist, but we do have some
tools to partially address them (the questions about the MPL api are
obviously beyond IPython's control).
Cheers,
f

I think this is worth discussing. But I have only 1.3 years experience with
matplotlib and python. Basically, I do the same as you. But I think there
are few tips I would like to follow:
1. I would agree to make one major theme plot one script file. Avoid make
very long scripts with many plots. It's much more difficult to revisit. 
2. I would avoid writing too much fancy loops as it takes much more time
when you want to make some change later.
3. I would like to divide complex figures into simple ones. like I would use
scatter to plot only scatter, and plot for only plotting lines. but not use
plot to plot both. I think this allows more flexible way in the future to
make necessary modifications.
But I still don't manage to find a good way for efficiently modifying
scripts and interactive plotting. It's very nice to have interactive
plotting (with --pylab) using ipython notebook, but when you want to make
some substitutions, it's much more tedious than in an editor like vim/emacs.
While in emacs or vim, you cannot simple select lines and execute them, so
you have to frequently copy and code and use %cpaste or %paste to paste the
code. And....., a lot lot windows shifting.... 
Chao
pybokeh wrote:
> 
> Maybe workflow may not be the appropriate term. Essentially, when I want
> to plot something using matplotlib, I find myself having to look up the
> api
> docs or examples online because quite frankly, matplotlib's syntax is very
> hard to remember. I use ipython and use tab browsing, help(), dir(), etc,
> and that seem to help to some extent. I absolutely love matplotlib, but
> when I want to put a chart up quickly, matplotlib is just a "hassle"
> depending on what chart you want to create. I do expect this since
> plotting with matplotlib, you are essentially creating a chart
> "programmatically", instead of GUI interface environment. But still, I
> feel like an improvement could still be made in making charts simpler with
> matplotlib.
> 
> While surfing the web, I ran into this module called Canvas:
> https://github.com/mdipierro/canvas
> 
> Canvas appears to be what I am after or what I wish matplotlib's future
> syntax should strive for.
> 
> Currently, I store my matplotlib chart source code in folders with the
> file
> name describing what chart it creates (for example, "box_plot.py" or
> "control_chart.py", etc.) and use them as "cheat sheets" when I need to
> make a chart. I am curious what other matplotlib users do? Otherwise, I
> do find myself sometimes just creating the chart in Excel as a 1st option,
> and make charts in matplotlib if it is something Excel can't handle.
> 
> Thanks in advance,
> Daniel
> 
> ------------------------------------------------------------------------------
> Live Security Virtual Conference
> Exclusive live event will cover all the ways today's security and 
> threat landscape has changed and how IT managers can respond. Discussions 
> will include endpoint security, mobile security and the latest in malware 
> threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/
> _______________________________________________
> Matplotlib-users mailing list
> Mat...@li...
> https://lists.sourceforge.net/lists/listinfo/matplotlib-users
> 
> 
-- 
View this message in context: http://old.nabble.com/What-is-your-matplotlib-workflow--tp33987463p33996351.html
Sent from the matplotlib - users mailing list archive at Nabble.com.

Le 11/06/2012 22:30, magurling a écrit :
> I just wanted the axis line to end at the last y tick
> I've never used an explicit axis. What will axis('tight') actually do?
In your case plt.axis('tight') will constrain the axes to your plotted 
object, no space above, below, or at the right. The "good" plot
gives x from 0 to 0.10, and y from -20.5 to 69. (The other: to 70).
The tight_layout directive is used mainly when you have several subplots.
Jerzy Karczmarczuk

Jerzy Karczmarczuk-2 wrote:
> 
> What do you really want?
> 
I just wanted the axis line to end at the last y tick
> I would suggest using an explicit axis, e.g.
> 
> plt.axis([0,0.10,-25,80])
> 
> (or between -30 and 100, or 'tight', etc.)
> 
I've never used an explicit axis. What will axis('tight') actually do?
> Perhaps you wanted axis('tight') rather than your tight_layout?
> 
I actually wanted tight_layout. good.py and bad.py were just my attempt to
reduce the problem to the fewest lines of code before posting it. The actual
problem script has a lot more going on and tight_layout works well in that
script for reasons unrelated to this problem. Sorry if I made things unclear
by leaving the tight_layout line in the scripts that I posted. 
-- 
View this message in context: http://old.nabble.com/y-axis-misbehavior-tp33977870p33996132.html
Sent from the matplotlib - users mailing list archive at Nabble.com.

Tony Yu-3 wrote:
> 
> `yticks()` just sets the ticks, which shows up correctly in both plots. It
> sounds like what you want to specify is the axis limit. You can add the
> following (e.g. after the call to `yticks`):
> 
> plt.ylim(ymin=-30)
> 
Thanks Tony for clearing up my misunderstanding of what yticks() is doing.
Using ylim() gives me what I was after.
-- 
View this message in context: http://old.nabble.com/y-axis-misbehavior-tp33977870p33996062.html
Sent from the matplotlib - users mailing list archive at Nabble.com.

On Mon, Jun 11, 2012 at 12:23 PM, Gustavo Goretkin <
gus...@gm...> wrote:
> The problem is that the function in _path.cpp expects a path radius
> argument, r.
>
> Here is the signature:
> point_in_path(double x, double y, double r, PathIterator& path,
> const agg::trans_affine& trans)
>
> but the invocation in python looks like this:
>
> point_in_path(point[0], point[1], self, transform)
>
>
Unless someone undid the fix, this was already fixed in master, I believe.
The current python invocation is:
 result = point_in_path(point[0], point[1], radius, self, transform)
Ben Root

I can't reproduce this on version >= 1.1.0. What version of matplotlib
are you using?
On 11 June 2012 17:23, Gustavo Goretkin <gus...@gm...> wrote:
> The problem is that the function in _path.cpp expects a path radius
> argument, r.
>
> Here is the signature:
> point_in_path(double x, double y, double r, PathIterator& path,
>        const agg::trans_affine& trans)
>
> but the invocation in python looks like this:
>
> point_in_path(point[0], point[1], self, transform)
>
>
>
> On Sat, Jun 9, 2012 at 9:27 PM, Gustavo Goretkin
> <gus...@gm...> wrote:
>>
>> I think I'm experiencing a bug.
>>
>> Here is a minimum example:
>>
>> import matplotlib.patches as mpatches
>> path = mpatches.Rectangle((0,0),width=1,height=1).get_path()
>> print path.contains_point(point=(.5,.5))
>>
>> it raises an IndexError: Unexpected SeqBase<T> length.
>>
>> I think this is a problem in the contains_point method which calls a C
>> function point_in_path inside of matplotlib._path
>>
>> Thanks!
>> Gustavo
>
>
>
> ------------------------------------------------------------------------------
> Live Security Virtual Conference
> Exclusive live event will cover all the ways today's security and
> threat landscape has changed and how IT managers can respond. Discussions
> will include endpoint security, mobile security and the latest in malware
> threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/
> _______________________________________________
> Matplotlib-users mailing list
> Mat...@li...
> https://lists.sourceforge.net/lists/listinfo/matplotlib-users
>

The problem is that the function in _path.cpp expects a path radius
argument, r.
Here is the signature:
point_in_path(double x, double y, double r, PathIterator& path,
 const agg::trans_affine& trans)
but the invocation in python looks like this:
point_in_path(point[0], point[1], self, transform)
On Sat, Jun 9, 2012 at 9:27 PM, Gustavo Goretkin <gus...@gm...
> wrote:
> I think I'm experiencing a bug.
>
> Here is a minimum example:
>
> import matplotlib.patches as mpatches
> path = mpatches.Rectangle((0,0),width=1,height=1).get_path()
> print path.contains_point(point=(.5,.5))
>
> it raises an IndexError: Unexpected SeqBase<T> length.
>
> I think this is a problem in the contains_point method which calls a C
> function point_in_path inside of matplotlib._path
>
> Thanks!
> Gustavo
>

to matplotlib-use.
Hi,
 I have a data set that is composed of x,y,z coordinates of the center of
cells and counts of objects in each contained in cell. I am using the
following code to do a scatter plot of the counts per cell.
ax = fig.add_subplot(111, projection='3d')
ax.scatter(Xa, Ya, Za, zdir='z', s=C, c='b')
ax.set_xlabel('X Label')
ax.set_ylabel('Y Label')
ax.set_zlabel('Z Label')
plt.show()
Where Xa, Ya, Za, are arrays containing the cell centers, and C is an array
of counts per cell. Below is a plot I did where the blue circles represent
the "size in points^2. It is a scalar or an array of the same length as x
and y."(Quote from docs). What I would like to do is have the plot show
the actual number of counts as points in the plot. Is such a thing possible?
Thanks
Best,
Khary
http://old.nabble.com/file/p33990025/3D_2.png 
-- 
View this message in context: http://old.nabble.com/Plot-points-in-a-3D-Scatter-Plot-tp33990025p33990025.html
Sent from the matplotlib - users mailing list archive at Nabble.com.

Hi,
 I have a data set that is composed of x,y,z coordinates of the center of
cells and counts of objects in each contained in cell. I am using the
following code to do a scatter plot of the counts per cell.
ax = fig.add_subplot(111, projection='3d')
ax.scatter(Xa, Ya, Za, zdir='z', s=C, c='b')
ax.set_xlabel('X Label')
ax.set_ylabel('Y Label')
ax.set_zlabel('Z Label')
plt.show()
****************
Where Xa, Ya, Za, are arrays containing the cell centers, and C is an array
of counts per cell. Below is a plot I did where the blue circles represent
the "size in points^2. It is a scalar or an array of the same length as *x*and
*y*."(Quote from docs). What I would like to do is have the plot show the
actual number of counts as points in the plot. Is such a thing possible?
Thanks
Best,
Khary
-- 
StriperCoast SurfCasters Club

Hey guys,
thanks for the quick replies. You are right, the problem appears to be
related to my pdf viewer (okular). More concretely, pdf viewers based
on the poppler library (e.g. xpdf, qpdfview) show the same problem in
ubuntu 12.04. Everything works fine with evince or acroread.
Thanks,
Benjamin
On Sat, Jun 9, 2012 at 7:43 PM, Jerzy Karczmarczuk
<jer...@un...> wrote:
> Benjamin Jonen:
>> I get random markers on the
>> line. This effect appears for pdf but not for png. When I use eps and
>> convert the eps file to pdf I also receive the random markers.
>> ...
> For me your PDF is OK, nothing "broken". I get exactly the same (mpl
> 1.1.0, on Windows XP, Python 2.7).
> Your problem has probably nothing to do with matplotlib...
>
> Jerzy Karczmarczuk
>
>
>
> ------------------------------------------------------------------------------
> Live Security Virtual Conference
> Exclusive live event will cover all the ways today's security and
> threat landscape has changed and how IT managers can respond. Discussions
> will include endpoint security, mobile security and the latest in malware
> threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/
> _______________________________________________
> Matplotlib-users mailing list
> Mat...@li...
> https://lists.sourceforge.net/lists/listinfo/matplotlib-users

I think I'm experiencing a bug.
Here is a minimum example:
import matplotlib.patches as mpatches
path = mpatches.Rectangle((0,0),width=1,height=1).get_path()
print path.contains_point(point=(.5,.5))
it raises an IndexError: Unexpected SeqBase<T> length.
I think this is a problem in the contains_point method which calls a C
function point_in_path inside of matplotlib._path
Thanks!
Gustavo

Maybe workflow may not be the appropriate term. Essentially, when I want
to plot something using matplotlib, I find myself having to look up the api
docs or examples online because quite frankly, matplotlib's syntax is very
hard to remember. I use ipython and use tab browsing, help(), dir(), etc,
and that seem to help to some extent. I absolutely love matplotlib, but
when I want to put a chart up quickly, matplotlib is just a "hassle"
depending on what chart you want to create. I do expect this since
plotting with matplotlib, you are essentially creating a chart
"programmatically", instead of GUI interface environment. But still, I
feel like an improvement could still be made in making charts simpler with
matplotlib.
While surfing the web, I ran into this module called Canvas:
https://github.com/mdipierro/canvas
Canvas appears to be what I am after or what I wish matplotlib's future
syntax should strive for.
Currently, I store my matplotlib chart source code in folders with the file
name describing what chart it creates (for example, "box_plot.py" or
"control_chart.py", etc.) and use them as "cheat sheets" when I need to
make a chart. I am curious what other matplotlib users do? Otherwise, I
do find myself sometimes just creating the chart in Excel as a 1st option,
and make charts in matplotlib if it is something Excel can't handle.
Thanks in advance,
Daniel

Benjamin Jonen:
> I get random markers on the
> line. This effect appears for pdf but not for png. When I use eps and
> convert the eps file to pdf I also receive the random markers.
> ...
For me your PDF is OK, nothing "broken". I get exactly the same (mpl 
1.1.0, on Windows XP, Python 2.7).
Your problem has probably nothing to do with matplotlib...
Jerzy Karczmarczuk

No extra "stuff" in the png and pdf plots in my case (changed the hash-bang line):
Mac 10.7.4 w/ python and matplotlib from (not too recent) Fink:
 i python27 1:2.7.2-5 Interpreted, object-oriented language
 i python27-shlibs 1:2.7.2-5 Interpreted, object-oriented language
 i matplotlib-base 1.0.2-1 Plot data on map projections with matplotlib
 i matplotlib-py27 1.1.0-2 Pure python 2D plotting with a Matlab syntax
-Dale
On Jun 9, 2012, at 13:00 , Benjamin Jonen wrote:
> Hey everybody,
> 
> I am trying to create a simple plot with a dotted line. However,
> depending on the export format I use, I get random markers on the
> line. This effect appears for pdf but not for png. When I use eps and
> convert the eps file to pdf I also receive the random markers.
> 
> I use the following script to generate the plot. The resulting graph
> on my system is attached to this mail.
> 
> #!/usr/bin/env python
> import numpy as np
> a = np.linspace(0.,10.,100)
> b = np.sqrt(a)
> import matplotlib
> matplotlib.use('Agg')
> import matplotlib.pyplot as plt
> fig = plt.figure()
> ax = fig.add_subplot(111)
> fig.add_subplot(ax)
> ax.plot(a, b, linestyle = ':', color = 'k', linewidth = 3)
> fig.savefig('broken.pdf')
> 
> My system is:
> 
> Linux 3.2.0-24-generic #39-Ubuntu SMP Mon May 21 16:52:17 UTC 2012
> x86_64 x86_64 x86_64 GNU/Linux
> 
> I am using matplotlib version '1.1.0'.
> 
> Any help is greatly appreciated.
> Benjamin
> <broken.pdf>------------------------------------------------------------------------------
> Live Security Virtual Conference
> Exclusive live event will cover all the ways today's security and 
> threat landscape has changed and how IT managers can respond. Discussions 
> will include endpoint security, mobile security and the latest in malware 
> threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/_______________________________________________
> Matplotlib-users mailing list
> Mat...@li...
> https://lists.sourceforge.net/lists/listinfo/matplotlib-users

Hey everybody,
I am trying to create a simple plot with a dotted line. However,
depending on the export format I use, I get random markers on the
line. This effect appears for pdf but not for png. When I use eps and
convert the eps file to pdf I also receive the random markers.
I use the following script to generate the plot. The resulting graph
on my system is attached to this mail.
#!/usr/bin/env python
import numpy as np
a = np.linspace(0.,10.,100)
b = np.sqrt(a)
import matplotlib
matplotlib.use('Agg')
import matplotlib.pyplot as plt
fig = plt.figure()
ax = fig.add_subplot(111)
fig.add_subplot(ax)
ax.plot(a, b, linestyle = ':', color = 'k', linewidth = 3)
fig.savefig('broken.pdf')
My system is:
Linux 3.2.0-24-generic #39-Ubuntu SMP Mon May 21 16:52:17 UTC 2012
x86_64 x86_64 x86_64 GNU/Linux
I am using matplotlib version '1.1.0'.
Any help is greatly appreciated.
Benjamin

http://maison-cantury.com/rpsleyubzq/514834.html