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Showing results of 620

<< < 1 .. 21 22 23 24 25 > >> (Page 23 of 25)
From: David A. <dwa...@su...> - 2010年02月06日 07:01:54
Hi,
I'm trying to get manual labeling of contours to work:
import numpy as np
import matplotlib.mlab as mlab
import matplotlib.pyplot as plt
delta = 0.025
x = np.arange(-3.0, 3.0, delta)
y = np.arange(-2.0, 2.0, delta)
X, Y = np.meshgrid(x, y)
Z1 = mlab.bivariate_normal(X, Y, 1.0, 1.0, 0.0, 0.0)
Z2 = mlab.bivariate_normal(X, Y, 1.5, 0.5, 1, 1)
# difference of Gaussians
Z = 10.0 * (Z2 - Z1)
plt.figure()
CS = plt.contour(X, Y, Z, 6,
 linewidths=np.arange(.5, 4, .5),
 colors=('r', 'green', 'blue', (1,1,0), '#afeeee', '0.5')
 )
plt.clabel(CS, fontsize=9, inline=1, manual=True)
plt.title('Crazy lines')
plt.show()
On my macbook, clicking with the touchpad does not seem to work.
Any ideas?
David.
From: nbv4 <cp3...@oh...> - 2010年02月06日 04:58:29
I wrote a bunch of graph scripts for creating on-the-fly line plots with
django. Since I'm running the site on a low memory VPS, I need to run apache
in multi-threaded mode, which means all my code needs to be thread-safe. I
was using Pyplot a lot, which is not thread-safe. A solution I came up with
which worked pretty well was to replace this:
import matplotlib.pyplot as plt
self.fig = plt.figure(figsize=(3.5, 2.5),)
with this:
from matplotlib.figure import Figure
self.fig = Figure(figsize=(3.5, 2.5),)
It worked like a charm on all my graphs. I have a few maps that I created
with Basemap which this method does not seem to work on. My code works
perfectly fine with the first snippet posted above, but if I change it to
the snippet below, I get this error:
File "/srv/proj/maps/states.py" in as_response
 40. return plot_png2(self.plot).__call__()
File "/srv/proj/graphs/image_formats.py" in __call__
 50. edgecolor="white")
File "/usr/lib/pymodules/python2.6/matplotlib/figure.py" in savefig
 1033. self.canvas.print_figure(*args, **kwargs)
the second item in the traceback is this line:
fig.savefig(response,
 format=self.extension,
 bbox_inches="tight",
 pad_inches=.05,
 edgecolor="white")
Any ideas on whats going on here?
-- 
View this message in context: http://old.nabble.com/matplotlib.figure-and-basemap-tp27477116p27477116.html
Sent from the matplotlib - users mailing list archive at Nabble.com.
From: Gary P. <gar...@gm...> - 2010年02月06日 04:46:39
On Fri, Feb 5, 2010 at 3:46 PM, David MacQuigg <mac...@ec...> wrote:
>
> I can't get Matplotlib to work with IDLE. plt.show() makes beutiful plots,
> but IDLE is hung. Entering "exit" in the little pop-up console window
> raises an exception in IDLE, and then leaves the plot window hung. It looks
> like the old "dualing event loops" problem with IDLE, although the
> Matplotlib docs don't use that phrase.
>
> The way I ususally solve this is to use IDLE for editing my scripts, and a
> separate shell to actually run them. Here, I'm not using a saved script.
> This needs to work interactively, for students using Python in a physics
> class. I see that little console window, and it sure looks like that was
> intended to do what I need, but I can't find any documentation on the
> commands. How do I switch back and forth between IDLE and the plot window
> without leaving some process in limbo? Even better, is there an option to
> have the event loop automatically switch back to IDLE after each update?
>
> I'm running on Mac OS-X, so it looks like IPython is not an option. Also, I
> would rather stick with IDLE. It is the perfect IDE for non-CS students who
> shouldn't be spending their time on the complexities of a plotting package.
There's a different version of Idle called VIdle that is supposed to
fix certain problems. I haven't a clue if yours is one of them, but
you might try it. It comes standard in VPython http://www.vpython.org
 ... I don't know if it's available separately.
>
> --
> View this message in context: http://old.nabble.com/Matplotlib-conflicts-with-IDLE-tp27473693p27473693.html
> Sent from the matplotlib - users mailing list archive at Nabble.com.
>
>
> ------------------------------------------------------------------------------
> The Planet: dedicated and managed hosting, cloud storage, colocation
> Stay online with enterprise data centers and the best network in the business
> Choose flexible plans and management services without long-term contracts
> Personal 24x7 support from experience hosting pros just a phone call away.
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> https://lists.sourceforge.net/lists/listinfo/matplotlib-users
>
From: Eric F. <ef...@ha...> - 2010年02月06日 02:53:40
David Goldsmith wrote:
> On Mon, Oct 6, 2008 at 10:56 AM, Eric Firing <ef...@ha... 
> <mailto:ef...@ha...>> wrote:
> 
> Christopher Barker wrote:
> 
> David Goldsmith wrote:
> 
> I feel like I must be missing something
> 
> 
> yup -- though it's an understandable miss...
> 
> 
> I think the longstanding separation between the figure.dpi and the
> savefig.dpi is a continual gotcha that we can and should eliminate.
> Savefig should use the figure dpi, so that what is saved corresponds
> to what is on the screen, unless explicitly overridden. One way to
> reduce the problem, with what I hope is an adequate level of
> backwards compatibility, would be to have the savefig.dpi default to
> a special flag setting that means "track the figure.dpi". For
> example, savefig.dpi could be the string, 'screen', by default. This
> could still be overridden by a numerical rcParams setting, or by the
> explicit dpi kwarg setting in savefig() or print_figure().
> 
> There are still other highly confusing dpi things internally--such
> as a renderer.dpi setting that is ignored during rendering.
> 
> Comments?
> 
> 
> This appears to have never been "fixed" (though I see no opposition 
> expressed looking back at the original thread in the archive) - having 
> forgotten about it and the fact that, at the time, it sent me running to 
> PIL, I got bitten by it again (luckily I had a vague recollection of 
> this thread before posting the same problem again and making a complete 
> ass outta myself). I'm not sure if I have the bleeding edge version of 
> MPL, but as I'm now working on the second different computer I've had 
> since the OP, I'm pretty sure I'm running a later version than I was 
> back then. Did this issue ever mature into a ticket?
> 
Not that I know of. I never got back to it, and I don't think anyone 
else did, either.
Eric
> DG
> 
> 
> 
> Eric
> 
> 
> 
> 
> Attached are the results on my computer (see usage details
> below).
> Granted, I'm increasing the resolution each iteration,
> 
> 
> you are increasing the resolution of the figure, and of your
> calculations, but NOT of the output image. The hint was that
> every image was the same size: 1200X900 , which is 12"x9" at 100
> dpi.
> 
> It turns out that print_figure() doesn't respect the figures
> (native DPI), it defaults to 100 dpi, but you can override it:
> 
> > canvas.print_figure("test"+str(DPI)+"dpi.png", dpi=DPI)
> 
> Then you'll get what I think you want.
> 
> Maybe this will help:
> 
> http://www.scipy.org/Cookbook/Matplotlib/AdjustingImageSize
> 
> though it there, I talked about Figure.savefig(). I don't know
> if there is a difference between that and Figure.print_figure()
> 
> -Chris
> 
From: Michiel de H. <mjl...@ya...> - 2010年02月06日 01:29:08
This is not a matplotlib problem but an issue with Python itself. Unlike for example Tcl/Tk, Python does not have support for event loops. Each of the graphics backends (Tkinter, PyGTK, PyQT, the Mac OS X native backend) therefore each implement an event loop on their own. In general, these will clash with each other. Even IDLE's event loop (IDLE uses Tkinter) does not play nice with Tkinter itself: import Tkinter; Tkinter.Tk() opens a Tk window when run from the console, but does nothing when run from IDLE. Until Python itself supports event loops, I doubt that these problems will go away. I believe that ipython has made some progress in addressing these issues, but that of course won't help people who use regular python instead of ipython.
--Michiel.
--- On Fri, 2/5/10, David MacQuigg <mac...@ec...> wrote:
> From: David MacQuigg <mac...@ec...>
> Subject: [Matplotlib-users] Matplotlib conflicts with IDLE
> To: mat...@li...
> Date: Friday, February 5, 2010, 3:46 PM
> 
> I can't get Matplotlib to work with IDLE. plt.show()
> makes beutiful plots,
> but IDLE is hung. Entering "exit" in the little
> pop-up console window
> raises an exception in IDLE, and then leaves the plot
> window hung. It looks
> like the old "dualing event loops" problem with IDLE,
> although the
> Matplotlib docs don't use that phrase.
> 
> The way I ususally solve this is to use IDLE for editing my
> scripts, and a
> separate shell to actually run them. Here, I'm not
> using a saved script. 
> This needs to work interactively, for students using Python
> in a physics
> class. I see that little console window, and it sure
> looks like that was
> intended to do what I need, but I can't find any
> documentation on the
> commands. How do I switch back and forth between IDLE
> and the plot window
> without leaving some process in limbo? Even better,
> is there an option to
> have the event loop automatically switch back to IDLE after
> each update?
> 
> I'm running on Mac OS-X, so it looks like IPython is not an
> option. Also, I
> would rather stick with IDLE. It is the perfect IDE
> for non-CS students who
> shouldn't be spending their time on the complexities of a
> plotting package.
> 
> -- 
> View this message in context: http://old.nabble.com/Matplotlib-conflicts-with-IDLE-tp27473693p27473693.html
> Sent from the matplotlib - users mailing list archive at
> Nabble.com.
> 
> 
> ------------------------------------------------------------------------------
> The Planet: dedicated and managed hosting, cloud storage,
> colocation
> Stay online with enterprise data centers and the best
> network in the business
> Choose flexible plans and management services without
> long-term contracts
> Personal 24x7 support from experience hosting pros just a
> phone call away.
> http://p.sf.net/sfu/theplanet-com
> _______________________________________________
> Matplotlib-users mailing list
> Mat...@li...
> https://lists.sourceforge.net/lists/listinfo/matplotlib-users
> 
 
From: David G. <d_l...@ya...> - 2010年02月05日 23:17:58
On Mon, Oct 6, 2008 at 10:56 AM, Eric Firing <ef...@ha...> wrote:
> Christopher Barker wrote:
>
>> David Goldsmith wrote:
>>
>>> I feel like I must be missing something
>>>
>>
>> yup -- though it's an understandable miss...
>>
>
> I think the longstanding separation between the figure.dpi and the
> savefig.dpi is a continual gotcha that we can and should eliminate. Savefig
> should use the figure dpi, so that what is saved corresponds to what is on
> the screen, unless explicitly overridden. One way to reduce the problem,
> with what I hope is an adequate level of backwards compatibility, would be
> to have the savefig.dpi default to a special flag setting that means "track
> the figure.dpi". For example, savefig.dpi could be the string, 'screen', by
> default. This could still be overridden by a numerical rcParams setting, or
> by the explicit dpi kwarg setting in savefig() or print_figure().
>
> There are still other highly confusing dpi things internally--such as a
> renderer.dpi setting that is ignored during rendering.
>
> Comments?
>
This appears to have never been "fixed" (though I see no opposition
expressed looking back at the original thread in the archive) - having
forgotten about it and the fact that, at the time, it sent me running to
PIL, I got bitten by it again (luckily I had a vague recollection of this
thread before posting the same problem again and making a complete ass outta
myself). I'm not sure if I have the bleeding edge version of MPL, but as
I'm now working on the second different computer I've had since the OP, I'm
pretty sure I'm running a later version than I was back then. Did this
issue ever mature into a ticket?
DG
>
> Eric
>
>
>
>>
>> Attached are the results on my computer (see usage details below).
>>> Granted, I'm increasing the resolution each iteration,
>>>
>>
>> you are increasing the resolution of the figure, and of your calculations,
>> but NOT of the output image. The hint was that every image was the same
>> size: 1200X900 , which is 12"x9" at 100 dpi.
>>
>> It turns out that print_figure() doesn't respect the figures (native DPI),
>> it defaults to 100 dpi, but you can override it:
>>
>> > canvas.print_figure("test"+str(DPI)+"dpi.png", dpi=DPI)
>>
>> Then you'll get what I think you want.
>>
>> Maybe this will help:
>>
>> http://www.scipy.org/Cookbook/Matplotlib/AdjustingImageSize
>>
>> though it there, I talked about Figure.savefig(). I don't know if there is
>> a difference between that and Figure.print_figure()
>>
>> -Chris
>>
>>
>>
>
>
From: Christopher B. <Chr...@no...> - 2010年02月05日 20:55:43
David MacQuigg wrote:
> I can't get Matplotlib to work with IDLE. 
Sorry, I don't know anything about IDLE, but...
> I'm running on Mac OS-X, so it looks like IPython is not an option.
Why not? I use Ipython on OS-X all the time, and it is fabulous, really 
fabulous.
> Also, I
> would rather stick with IDLE. It is the perfect IDE for non-CS students who
> shouldn't be spending their time on the complexities of a plotting package.
Spyder:
http://packages.python.org/spyder/
Looks really promising, but I don't think they've got OS-X packages yet.
-Chris
-- 
Christopher Barker, Ph.D.
Oceanographer
Emergency Response Division
NOAA/NOS/OR&R (206) 526-6959 voice
7600 Sand Point Way NE (206) 526-6329 fax
Seattle, WA 98115 (206) 526-6317 main reception
Chr...@no...
From: David M. <mac...@ec...> - 2010年02月05日 20:46:41
I can't get Matplotlib to work with IDLE. plt.show() makes beutiful plots,
but IDLE is hung. Entering "exit" in the little pop-up console window
raises an exception in IDLE, and then leaves the plot window hung. It looks
like the old "dualing event loops" problem with IDLE, although the
Matplotlib docs don't use that phrase.
The way I ususally solve this is to use IDLE for editing my scripts, and a
separate shell to actually run them. Here, I'm not using a saved script. 
This needs to work interactively, for students using Python in a physics
class. I see that little console window, and it sure looks like that was
intended to do what I need, but I can't find any documentation on the
commands. How do I switch back and forth between IDLE and the plot window
without leaving some process in limbo? Even better, is there an option to
have the event loop automatically switch back to IDLE after each update?
I'm running on Mac OS-X, so it looks like IPython is not an option. Also, I
would rather stick with IDLE. It is the perfect IDE for non-CS students who
shouldn't be spending their time on the complexities of a plotting package.
-- 
View this message in context: http://old.nabble.com/Matplotlib-conflicts-with-IDLE-tp27473693p27473693.html
Sent from the matplotlib - users mailing list archive at Nabble.com.
From: Wayne W. <sie...@sb...> - 2010年02月05日 20:11:09
I'm working in IDLE in Win7. It seems to me it gets stuck in 
site-packages under C:\Python25. Maybe this is as simple as deleting the 
entry?
Well, yes there's a MPL folder under site-packages and an info MPL file 
of 540 bytes. There are also pylab.py, pyc,and py0 files under site. 
What to do next?
On 2/5/2010 7:13 AM, Wayne Watson wrote:
> I should have installed numpy first, and got some errors installing
> MPL. I don't see an uninstall in Control Panel Add/Rmv.
> 
-- 
My life in two words. "Interrupted Projects." -- WTW (quote originator)
From: <ea...@mp...> - 2010年02月05日 17:54:18
> On Fri, Feb 5, 2010 at 10:10 AM, Eymen Alyaz <ea...@mp...>
> wrote:
>> Is there a way to automatically correct the area of figure and resize it
>> such that every box drawn is visible?
>
> If you're only interested in the saved ouput, you may use
> "bbox_inches" option of "savefig". It does not change the size of the
> figure currently displayed, but it does change the size of the figure
> that is to be saved. Unfortunately, the released version of mpl will
> not work. With svn version, you can do
> ...
Thank you for this quick reply. Your suggestion matched my intention of
plotting/ saving the figure. I will give the svn version a shot and try it
out.
Regards,
Eymen
From: Jae-Joon L. <lee...@gm...> - 2010年02月05日 17:41:30
On Fri, Feb 5, 2010 at 10:10 AM, Eymen Alyaz <ea...@mp...> wrote:
> Is there a way to automatically correct the area of figure and resize it
> such that every box drawn is visible?
>
Things like axes position is given in normalized figure coordinates,
thus while you can change the figure size but it is quite hard to keep
things in place. And, no, current mpl does not support that.
If you're only interested in the saved ouput, you may use
"bbox_inches" option of "savefig". It does not change the size of the
figure currently displayed, but it does change the size of the figure
that is to be saved. Unfortunately, the released version of mpl will
not work. With svn version, you can do
l = legend(bbox_to_anchor=(1.05, 1), loc=2, borderaxespad=0.)
savefig("a.eps", bbox_inches="tight", bbox_extra_artists=[l.legendPatch])
Regards,
-JJ
From: Wayne W. <sie...@sb...> - 2010年02月05日 15:13:17
I should have installed numpy first, and got some errors installing 
MPL. I don't see an uninstall in Control Panel Add/Rmv.
-- 
My life in two words. "Interrupted Projects." -- WTW (quote originator)
From: Eymen A. <ea...@mp...> - 2010年02月05日 15:11:04
Hello,
please try this.
from matplotlib.pyplot import *
plot([1,2,3], label="very loooooooong label")
plot([3,2,1], label="very loooooooong label2")
legend(bbox_to_anchor=(1.05, 1), loc=2, borderaxespad=0.)
show()
The code puts a legend with very long label text outside the figure.
When drawing only the beginning of the legend is visible.
Is there a way to automatically correct the area of figure and resize it
such that every box drawn is visible?
I know I can overcome this issue by using subplots. But this would only
work to a certain extend of the problem.
Regards
Eymen
Once you have an axes object, you can call set_xlim() and set_ylim() on 
it to change the limits of the x- and y- axes respectively. You should 
be able to call that and savefig() iteratively to produce plots of 
different subsets of the same data.
Let me know if you need more details,
Mike
On 02/05/2010 01:08 AM, David Carmean wrote:
> Hi,
>
> I just emigrated from Ploticus last week :) Am working on a project where
> I'm plotting the contents of a large .csv file with about 250,000 cells
> (unix system 5-minute load averages from a set of 50 servers, for about
> three weeks data now).
>
> I'm developing this in Spyder/Python(x,y)--completely unknown to me until
> last week--and the pan/zoom capability makes me wish/wonder two things:
>
> 1: I wish I could interactively save the zoomed view to disk, and
>
> 2: This behavior hints at the possiblity of a better way to go back
> and plot 15 1-day views of the original plot, than slicing up the
> source array and re-plotting.
>
>
> I'm .. so new to matplotlib/numpy that I'm sure I'm missing some
> key concepts/terminology that, once identified, will let me find my
> way to what I need to know. For example, I'm terribly confused right
> now by Axes.get_axes().
>
> Which classes/methods/examples/gallery examples should I look at?
>
> Thanks.
>
>
>
> ------------------------------------------------------------------------------
> The Planet: dedicated and managed hosting, cloud storage, colocation
> Stay online with enterprise data centers and the best network in the business
> Choose flexible plans and management services without long-term contracts
> Personal 24x7 support from experience hosting pros just a phone call away.
> http://p.sf.net/sfu/theplanet-com
> _______________________________________________
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From: Alan G I. <ala...@gm...> - 2010年02月05日 13:24:26
On 2/5/2010 12:51 AM, Wayne Watson wrote:
> what I'm looking for is a way to draw a zig-zag path
> indicating a path taken by a particle
Here is a 2d example:
 >>> import numpy as np
 >>> import matplotlib.pyplot as plt
 >>> locs = np.random.random_sample((2,30))
 >>> locs = np.random.random_sample((2,30)) - 0.5
 >>> locs = np.cumsum(locs, axis=-1)
 >>> x,y = locs
 >>> plt.plot(x,y)
hth,
Alan Isaac
From: Eric F. <ef...@ha...> - 2010年02月05日 07:32:40
Wayne Watson wrote:
> Simply explained what I'm looking for is a way to draw a zig-zag path 
> indicating a path taken by a particle. Maybe this is best done with some 
> tools outside of the normal plot capabilities?
Why doesn't plot handle this? What do you see as missing?
> 
> On 2/4/2010 9:02 PM, Wayne Watson wrote:
>> Is there a difference between the two (Subject). Perhaps plot connects
>> lines in the order of x? However, scatter does not connect any points?
>> 
Yes, plot connects points in the order in which they appear in the input 
sequence; scatter does not connect, and has additional capabilities for 
varying the symbol, size, and color.
Eric
> 
From: David C. <dl...@ha...> - 2010年02月05日 06:08:48
Hi,
I just emigrated from Ploticus last week :) Am working on a project where 
I'm plotting the contents of a large .csv file with about 250,000 cells
(unix system 5-minute load averages from a set of 50 servers, for about 
three weeks data now). 
I'm developing this in Spyder/Python(x,y)--completely unknown to me until 
last week--and the pan/zoom capability makes me wish/wonder two things:
1: I wish I could interactively save the zoomed view to disk, and
2: This behavior hints at the possiblity of a better way to go back 
and plot 15 1-day views of the original plot, than slicing up the 
source array and re-plotting.
I'm .. so new to matplotlib/numpy that I'm sure I'm missing some 
key concepts/terminology that, once identified, will let me find my 
way to what I need to know. For example, I'm terribly confused right 
now by Axes.get_axes().
Which classes/methods/examples/gallery examples should I look at?
Thanks.
From: Wayne W. <sie...@sb...> - 2010年02月05日 05:51:54
Simply explained what I'm looking for is a way to draw a zig-zag path 
indicating a path taken by a particle. Maybe this is best done with some 
tools outside of the normal plot capabilities?
On 2/4/2010 9:02 PM, Wayne Watson wrote:
> Is there a difference between the two (Subject). Perhaps plot connects
> lines in the order of x? However, scatter does not connect any points?
> 
-- 
My life in two words. "Interrupted Projects." -- WTW (quote originator)
From: Wayne W. <sie...@sb...> - 2010年02月05日 05:02:50
Is there a difference between the two (Subject). Perhaps plot connects 
lines in the order of x? However, scatter does not connect any points?
-- 
My life in two words. "Interrupted Projects." -- WTW (quote originator)
From: Pavlo S. <shc...@gm...> - 2010年02月04日 15:30:40
Attachments: backend_wx.py.patch
I am terribly sorry, but it looks like all the indentation disappeared
from the code. I'll try to attach the path file here.
Best regards,
Pavlo
On Thu, Feb 4, 2010 at 16:19, Pavlo Shchelokovskyy
<shc...@gm...> wrote:
> Hi all,
> I've got bored with the generic application icon in the wx backend so
> I added the same icon as GTK backend uses (it is anyway bundled with
> matplotlib). I have tested this on Windows (XP, Python 2.6.4,
> matplotlib 0.99.1, wxPython 2.8.10.1) and on Linux (Fedora8, Python
> 2.5.1, matplotlib 0.98.3, wxPython 0.8.9.1)
> may be somebody from developers can integrate this patch into the source...
From: Pavlo S. <shc...@gm...> - 2010年02月04日 15:20:21
Hi all,
I've got bored with the generic application icon in the wx backend so
I added the same icon as GTK backend uses (it is anyway bundled with
matplotlib). I have tested this on Windows (XP, Python 2.6.4,
matplotlib 0.99.1, wxPython 2.8.10.1) and on Linux (Fedora8, Python
2.5.1, matplotlib 0.98.3, wxPython 0.8.9.1)
may be somebody from developers can integrate this patch into the source...
*** backend_wx.py	2010年02月04日 13:17:59.954259000 +0100
--- backend_wx.py		2010年02月04日 16:00:45.251283000 +0100
***************
*** 1454,1460 ****
 self.figmgr = FigureManagerWx(self.canvas, num, self)
 bind(self, wx.EVT_CLOSE, self._onClose)
!
 def _get_toolbar(self, statbar):
 if matplotlib.rcParams['toolbar']=='classic':
 toolbar = NavigationToolbarWx(self.canvas, True)
--- 1454,1473 ----
 self.figmgr = FigureManagerWx(self.canvas, num, self)
 bind(self, wx.EVT_CLOSE, self._onClose)
!
! # setting window icon to replace the generic one
! self.SetIcon(self._load_icon())
!
! def _load_icon(self):
! # since wxPython does not support SVG, only PNG image is used
! icon = wx.IconFromBitmap(_load_bitmap('matplotlib.png'))
! # on Windows wxPython can not use one icon size for all sizes,
! # with only exception of 32px -> 16px auto conversion
! if wx.Platform == '__WXMSW__':
! icon.SetHeight(32)
! icon.SetWidth(32)
! return icon
!
 def _get_toolbar(self, statbar):
 if matplotlib.rcParams['toolbar']=='classic':
 toolbar = NavigationToolbarWx(self.canvas, True)
From: Stephan M. <zw...@we...> - 2010年02月04日 14:50:23
Hello!
I'm writing an application that will show different plots on it's GUI. In
order to switch between the different plot types I'd like to destroy the
first plot and to create a new afterwards. I stumbled into a memory leak
since I don't know how to close matplotlib figures the clean way.
I wrote a small test programm. Pressing the button 'create' creates a figure
and 'delete' should destroy it.
Since the graph class is derived from the Tix.Frame class I would expect
that destroying the Frame would also remove all matplot stuff. But when I do
not implement my own destroy() method in the graph class, destroying the
Frame shows absolutely no effect. The plot simply stays on the screen. 
When I overload the Tix.Frame.destroy() method with my own implementation,
as shown below, the plot disappears but not all memory is being released.
When creating and deleting figures, the amount of memory python needs is
constantly growing and python eventually crashes.
I tried to find a solution on the internet but I found nothing really
helpful so far. All examples I found just display something and then just
exit.
I appreciate any help!
--------------
import matplotlib
matplotlib.use('TkAgg')
from numpy import arange, sin, pi
from matplotlib.backends.backend_tkagg import FigureCanvasTkAgg,
NavigationToolbar2TkAgg
from matplotlib.figure import Figure
import Tix 
import sys
def destroy(e): sys.exit()
root = Tix.Tk()
class graph(Tix.Frame):
 def __init__(self, master, **kw):
 Tix.Frame.__init__(self, master, **kw)
 self.f = Figure(figsize=(5,4), dpi=100)
 self.a = self.f.add_subplot(111)
 t = arange(0.0,3.0,0.01)
 s = sin(2*pi*t)
 self.a.plot(t,s)
 self.canvas = FigureCanvasTkAgg(self.f, master=self.master)
 self.canvas.show()
 self.canvas.get_tk_widget().pack(side=Tix.TOP, fill=Tix.BOTH,
expand=1)
 self.toolbar = NavigationToolbar2TkAgg(self.canvas, root )
 self.toolbar.update()
 self.canvas._tkcanvas.pack(side=Tix.TOP, fill=Tix.BOTH, expand=1)
 
 def destroy(self):
 Tix.Frame.destroy(self)
 self.toolbar.destroy()
 self.canvas._tkcanvas.destroy()
 
 
class ui(Tix.Frame):
 
 g = None
 
 def __init__(self, master, **kw):
 Tix.Frame.__init__(self, master, **kw)
 
 self.b = Tix.Button(self, text='create', command=self.create)
 self.b.pack()
 
 self.b2 = Tix.Button(self, text='delete', command=self.delete)
 self.b2.pack()
 def delete(self):
 try:
 self.g.destroy()
 except:
 pass
 
 def create(self):
 self.delete()
 self.g = graph(root)
 
 
ui(root).pack()
root.mainloop()
-- 
View this message in context: http://old.nabble.com/Memory-leak-when-destroying-Tk-frame-containing-a-figure-tp27452209p27452209.html
Sent from the matplotlib - users mailing list archive at Nabble.com.
From: Sourav K. M. <sou...@gm...> - 2010年02月04日 10:02:46
On Wed, 2010年02月03日 at 22:04 -0800, Michael Cohen wrote:
> > One of the most persistent problems I have with matplotlib is finding
> > out which kwargs and args are available for some commands.
> > For instance, I am looking at manipulating axis ticks and labels in
> > mplot3d, so I went to the mplot3d api page, and looked for useful
> > commands and found:
> >
> > set_xlabel(xlabel, fontdict=None, **kwargs)¶
> > Set xlabel.
> >
> > set_xlim3d(*args, **kwargs)¶
> > Set 3D x limits.
> >
> > However, there is no information that I can find about "args" and
> > "kwargs" that I can use to figure out how to make my changes.
Don't these unbound methods just take the same arguments as the bound
methods "xlabels" and "xlim", as given in
http://matplotlib.sourceforge.net/api/pyplot_api.html#matplotlib.pyplot.xlabel
and
http://matplotlib.sourceforge.net/api/pyplot_api.html#matplotlib.pyplot.xlim
?
From: Philipp B. <li...@ro...> - 2010年02月04日 07:53:27
Hi,
your problem is that you enter the X values in an unordered way? Then, you 
just have to sort the key-value-pairs before plotting.
One way it works is to create a dict in the form "d = {x1: y1,x2:y2}" (with a 
for loop and so on), then extract the keys:
k = d.keys()
k.sort()
v = [d[key] for key in k]
... now plot(k,v)
Maybe there is a simpler solution, but this one works.
Regards,
Philipp
From: Philipp B. <li...@ro...> - 2010年02月04日 07:27:58
Hi,
> If I select the x in
> the upper right, it dies badly.
This is maybe another problem, after closing the windows the program should 
exit with exitcode 0.
--------------------------
# -*- coding: utf-8 -*-
from pylab import *
t = linspace(0,10,100)
plot(t, sin(t))
show()
--------------------------
If the problem occurs with the example above it would help if you paste the 
error message and the exit code.
Regards, Philipp
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